KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:13 2014 Check: 00 .. Name: bmy_02147T0/1-185 Len: 291 Check: 7800 Weight: 1.00 Name: ENSTTRP00000014236/1-245 Len: 291 Check: 9225 Weight: 1.00 Name: ENSP00000350509/1-238 Len: 291 Check: 2744 Weight: 1.00 Name: ENSBTAP00000004546/1-238 Len: 291 Check: 2080 Weight: 1.00 // 1 50 bmy_02147T0/1-185 MALVPCQVLR VAILLSYCSI LCNYKAIEMP SHQTYGGSWK FLTFIDLLFS ENSTTRP00000014236/1-245 MALVPCQVLR VAILLSYCSI LCNYKAIEMP SHQTYGGSWK FLTFIDL--- ENSP00000350509/1-238 MALVPCQVLR MAILLSYCSI LCNYKAIEMP SHQTYGGSWK FLTFIDL--- ENSBTAP00000004546/1-238 MALVPCQVLR VAILLSYCSI LCNYKAIEMP SHQTYGGSWK FLTFIDL--- 51 100 bmy_02147T0/1-185 YSAPDTLTAL APCGFAPPTL IPIRSVCVPC DWGTEHDWKQ MQVIQAVFFG ENSTTRP00000014236/1-245 ---------- ---------- ---------- ---------- --VIQAVFFG ENSP00000350509/1-238 ---------- ---------- ---------- ---------- --VIQAVFFG ENSBTAP00000004546/1-238 ---------- ---------- ---------- ---------- --VIQAVFFG 101 150 bmy_02147T0/1-185 ICVLTDLSSL LTRGSGSQEQ ERQLKKLISL RDWMLAVLAF PVGIFKYSI- ENSTTRP00000014236/1-245 ICVLTDLSSL LTRGSGSQEQ ERQLKKLISL RDWMLAVLAF PVGIFVVAVF ENSP00000350509/1-238 ICVLTDLSSL LTRGSGNQEQ ERQLKKLISL RDWMLAVLAF PVGVFVVAVF ENSBTAP00000004546/1-238 ICVLTDLSSL LTRGSGNQEQ ERQLKKLISL RDWMLAVLAF PVGVFVVAVF 151 200 bmy_02147T0/1-185 -LVLAAQKQQ VCAEE----- ---------- --------QL ATS------- ENSTTRP00000014236/1-245 WIIYAYDREM IYPKLLDNFI PGWLNHGMHT TVLPFILIEM RTSHHAYPSR ENSP00000350509/1-238 WIIYAYDREM IYPKLLDNFI PGWLNHGMHT TVLPFILIEM RTSHHQYPSR ENSBTAP00000004546/1-238 WIIYAYDREM IYPKLLDNFI PGWLNHGMHT TVLPFILIEM RTSHHAYPSR 201 250 bmy_02147T0/1-185 ---------- ---------- ---------- -------PGQ RRSFFTTVG- ENSTTRP00000014236/1-245 SSGLAAICTF SVGYILWVCW VHHVTGMWVY PFLEHIGPGA RILFFGSTTI ENSP00000350509/1-238 SSGLTAICTF SVGYILWVCW VHHVTGMWVY PFLEHIGPGA RIIFFGSTTI ENSBTAP00000004546/1-238 SSGLAAICTF SVGYILWVCW VHHVTGMWVY PFLEHIGPGA RILFFGSTTI 251 300 bmy_02147T0/1-185 ---------- ---------- ---------- ------RFNI T ENSTTRP00000014236/1-245 LMNFLYLLGE VLNSYIWDTQ RKPPSWQDVE INFIYMEPSS - ENSP00000350509/1-238 LMNFLYLLGE VLNNYIWDTQ KSMEEEKE-- ------KPKL E ENSBTAP00000004546/1-238 LMNFLYLLGE VLNSYIWDTQ RSMEEDKE-- ------KPKL E