KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:14 2014 Check: 00 .. Name: ENSP00000373713/1-587 Len: 595 Check: 9964 Weight: 1.00 Name: bmy_14850T0/1-494 Len: 595 Check: 9437 Weight: 1.00 Name: ENSBTAP00000004549/1-587 Len: 595 Check: 8832 Weight: 1.00 Name: BACU002459/1-386 Len: 595 Check: 9111 Weight: 1.00 Name: ENSTTRP00000009824/1-586 Len: 595 Check: 9334 Weight: 1.00 // 1 50 ENSP00000373713/1-587 --------MA TAAYEQLKLH ITPEKFYVEA CDDGADDVLT IDRVSTEVTL bmy_14850T0/1-494 FFWKSSFHFV IYGFKFLLRH ITPEKFYVEA CDDGADDVLI IDRVSTEVTL ENSBTAP00000004549/1-587 --------MA ATTYERLKLH VTPEKFYVEA CDDGADDVLI IDRVSTEVTL BACU002459/1-386 --------MA ATTYERLKLH ITPEKFYVEA CDDGADDVLI IDRVSTEVTL ENSTTRP00000009824/1-586 --------MA ATTYERLKLH ITPEKFYVEA CDDGTDDVLI IDRVSTEVTL 51 100 ENSP00000373713/1-587 AVKKDVPPSA VTRPIFGILG TIHLVAGNYL IVITKKIKVG EFFSHVVWKA bmy_14850T0/1-494 SVKKDIPPSA VTRPIFGILG TIHLVAGNYL IVITKKKKIG EFFNHLIWKA ENSBTAP00000004549/1-587 SVKKDIPPSA VTRPIFGILG TIHLVAGNYL IVITKKKKIG EFFNHVIWKA BACU002459/1-386 SVKKDIPPSA VTRPIFGILG TIHLVAGNYL IVITKKKKIG EFFNHVIWKA ENSTTRP00000009824/1-586 SVKKDIPPSA VTRPIFGILG TIHLVAGNYL IVITKKKKIG EFFNHVIWKA 101 150 ENSP00000373713/1-587 TDFDVLSYKK TMLHLTDIQL QDNKTFLAML NHVLNVDGFY FSTTYDLTHT bmy_14850T0/1-494 IDFDVLSYKK TMLHLTDIQL QDNKTFLAMI NHVLSVDGFY FSTTYDLTHT ENSBTAP00000004549/1-587 TDFDVLSYKK TMLHLTDIQL QDNKTFLAMM NHVLSMDGFY FSTTYDLTHT BACU002459/1-386 VDFDVLSYKK TMLHLTDIQL QDNKTFLAMI NHVLSVDGFY FSTTYDLTHT ENSTTRP00000009824/1-586 IDFDVLSYKK TMLHLTDIQL QDNKTFLAMI NHVLSVDGFY FSTTYDLTHT 151 200 ENSP00000373713/1-587 LQRLSNTSPE FQEMSLLERA DQRFVWNGHL LRELSAQPEV HRFALPVLHG bmy_14850T0/1-494 LQRLSNTSPE FQEMSLLERA DQRFVWNGHL LRELSAQPEV HRFALPVLYG ENSBTAP00000004549/1-587 LQRLSNTSPE FQEMSLLERA DQRFVWNGHL LRELSAQPEV HRFALPVLHG BACU002459/1-386 LQRLSNTSPE FQEMSLLERA DQRFVWNGHL LRELSAQPE- ---------- ENSTTRP00000009824/1-586 LQRLSNTSPE FQEMSLL-RA DQRFVWNGHL LRELSAQPEV HRFALPVLYG 201 250 ENSP00000373713/1-587 FITMHSCSIN GKYFDWILIS RRSCFRAGVR YYVRGIDSEG HAANFVETEQ bmy_14850T0/1-494 CI-------- ---------- --------LT YYSL------ ---------- ENSBTAP00000004549/1-587 FITMHSCSIN GKYFDWILIS RRSCFRAGVR YYVRGIDSEG HAANFVETEQ BACU002459/1-386 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009824/1-586 FITMHSXXXX XXXXXXXXXX XXXXXXXXXX XXXXXIDSEG HAANFVETEQ 251 300 ENSP00000373713/1-587 IVHYNGSKAS FVQTRGSIPV FWSQRPNLKY KPLPQISKVA NHMDGFQRHF bmy_14850T0/1-494 ---------- ---TRGSIPL YWSQRPNLKY KPLPLINKVA NH-------- ENSBTAP00000004549/1-587 IVHYNGSRAS FVQTRGSIPL YWSQRPNLKY KPLPLINKVA NHMDGFQRHF BACU002459/1-386 ---------- ---TRGSIPL YWSQRPNLKY KPLPLINKVA NHMDGFQRHF ENSTTRP00000009824/1-586 IVHYNGSRAS FVQTRGSIPL YWSQRPNLKY KPLPLINKVA NHMDGFQRHF 301 350 ENSP00000373713/1-587 DSQVIIYGKQ VIINLINQKG SEKPLEQTFA TMVSSLGSGM MRYIAFDFHK bmy_14850T0/1-494 ---------- -----VNQKG SEKPLEQAFA TMVSSLANGM IRYIAFDFHK ENSBTAP00000004549/1-587 DSQIIIYGKQ VIINLVNQKG SEKPLEQAFA TMVSSLGNGM IRYIAFDFHK BACU002459/1-386 DSQIIIYGKQ VIINLVNQKG SEKPLEQAFA TMVSSLANGM I--------- ENSTTRP00000009824/1-586 DSQIIIYGKQ VIINLVNQKG SEKPLEQAFA TMVSSLANGM IRYIAFDFHK 351 400 ENSP00000373713/1-587 ECKNMRWDRL SILLDQVAEM QDELSYFLVD SAGQVVANQE GVFRSNCMDC bmy_14850T0/1-494 ECKNMRWDRL SILLDQVAEM QDELSYFLVD SDGKVVTNQE GVFRSNCMDC ENSBTAP00000004549/1-587 ECKNMRWDRL SILLDQVAEM QDELSYFLVD PAGVVLSTQE GVFRSNCMDC BACU002459/1-386 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009824/1-586 ECKNMRWDRL SILLDQVAEM QDELSYFLVD SDGKVVTNQE GVFRSNCMDC 401 450 ENSP00000373713/1-587 LDRTNVIQSL LARRSLQAQL QRLGVLHVGQ KLEEQDEFEK IYKNAWADNA bmy_14850T0/1-494 LDRTNVIQSL LARRSLQAQL QRLGVLHVGQ KLEEQDEFEK IYKNG----- ENSBTAP00000004549/1-587 LDRTNVIQSL LARRSLQAQL QRLGVLHVGQ KLEEQDEFEK IYKNAWADNA BACU002459/1-386 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009824/1-586 LDRTNVIQSL LARRSLQAQL QRLGVLHVGQ KLEEQDEFEK IYKNAWADNA 451 500 ENSP00000373713/1-587 NACAKQYAGT GALKTDFTRT GKRTHLGLIM DGWNSMIRYY KNNFSDGFRQ bmy_14850T0/1-494 ---------- --------RT GKRTQLGLIM DGWNSLIRYY KNNFSDGFRQ ENSBTAP00000004549/1-587 NACAKQYAGT GALKTDFTRT GKRTQLGLIM DGWNSLIRYY KNNFSDGFRQ BACU002459/1-386 ---------- --------RT GKRTQLGLIM DGWNSLIRYY KNNFSDGFRQ ENSTTRP00000009824/1-586 NACAKQYAGT GALKTDFTRT GKRTQLGLIM DGWNSLIRYY KNNFSDGFRQ 501 550 ENSP00000373713/1-587 DSIDLFLGNY SVDELESHSP LSVPRDWKFL ALPIIMVVAF SMCIICLLMA bmy_14850T0/1-494 DSIDLFLGNY SVDELESHSP LSVPRDLKFL ALPIIMVVAF SMCIICLLMA ENSBTAP00000004549/1-587 DSIDLFLGNY SVDELESHSP LSVPRDLKFL ALPIIMVVAF SMCIICLLMA BACU002459/1-386 DSIDLFLGNY SVDELESHSP LSVPRDLKFL ALPIIMVVAF SMCIICLLMA ENSTTRP00000009824/1-586 DSIDLFLGNY SVDELESHSP LSVPRDLKFL ALPIIMVVAF SMCIICLLMA 551 600 ENSP00000373713/1-587 GDTWTETLAY VLFWGVASIG TFFIILYNGK DFVDAPRLVQ KEKID bmy_14850T0/1-494 GDTWTETLAY VLFWGVASIG TFFIILYNGK DFVDAPRLVQ KEKID ENSBTAP00000004549/1-587 GDTWTETLAY VLFWGVASIG TFFIILYNGK DFVDAPRLVQ KEKID BACU002459/1-386 GDTWTETLAY VLFWGVASIG TFFIILYNGK DFVDAPRLVQ KEKID ENSTTRP00000009824/1-586 GDTWTETLAY VLFWGVASIG TFFIILYNGK DFVDAPRLVQ KEKID