KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:14 2014 Check: 00 .. Name: bmy_17566T0/1-224 Len: 342 Check: 32 Weight: 1.00 Name: ENSBTAP00000004550/1-342 Len: 342 Check: 111 Weight: 1.00 Name: ENSTTRP00000001574/1-283 Len: 342 Check: 1350 Weight: 1.00 Name: ENSP00000403920/1-142 Len: 342 Check: 2697 Weight: 1.00 // 1 50 bmy_17566T0/1-224 ---------- ---------- ---------M EYVTLLGSPS L-YSRSVC-- ENSBTAP00000004550/1-342 MSLHGKRKEI YKYEAPWTVY AMNWSVRPDK RFRLALGSFV EEYNNKVQLV ENSTTRP00000001574/1-283 MSLHGKRKEI YKYEAPWTVY AMNWSVRPDK RFRLALGSFV EEYNNKXXXX ENSP00000403920/1-142 MSLHGKRKEI YKYEAPWTVY AMNWSVRPDK RFRLALGSFV EEYNNK---- 51 100 bmy_17566T0/1-224 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004550/1-342 GLDEESSEFI CRNTFDHPYP TTKLMWIPDT KGVYPDLLAT SGDYLRVWRV ENSTTRP00000001574/1-283 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV ENSP00000403920/1-142 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_17566T0/1-224 ---------- ---------- ---------- ------STSS IDTTCTIWGL ENSBTAP00000004550/1-342 GETETRLECL LNNNKNSDFC APLTSFDWNE VDPYLLGTSS IDTTCTIWGL ENSTTRP00000001574/1-283 GETETRLECL LNNNKNSDFC APLTSFDWNE VDPYLLGTSS IDTTCTIWGL ENSP00000403920/1-142 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_17566T0/1-224 ETGQVLGRVN LVSGHVKTQL IAHDKEVYDI AFSRAGGGRD MFASVGADGS ENSBTAP00000004550/1-342 ETGQVLGRVN LVSGHVKTQL IAHDKEVYDI AFSRAGGGRD MFASVGADGS ENSTTRP00000001574/1-283 ETGQVLGRVN LVSGHVKTQL IAHDKEVYDI AFSRE--GRD MFASVGADGS ENSP00000403920/1-142 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_17566T0/1-224 VRMFDLRHLE HSTIIYEDPQ HHPLLRLCWN KQDPNYLATM AMDGMEVVIL ENSBTAP00000004550/1-342 VRMFDLRHLE HSTIIYEDPQ HHPLLRLCWN KQDPNYLATM AMDGMEVVIL ENSTTRP00000001574/1-283 VRMFDLRHLE HSTIIYEDPQ HHPLLRLCWN KQDPNYLATM AMDGMEVVIL ENSP00000403920/1-142 ---------- ---------- ---------- ---------- ------VVIL 251 300 bmy_17566T0/1-224 DVRVPCTPVA RLNNHRACVN GIAWAPHSSC HICTAADDHQ ALIWDIQQMP ENSBTAP00000004550/1-342 DVRVPCTPVA RLNNHRACVN GIAWAPHSSC HICTAADDHQ ALIWDIQQMP ENSTTRP00000001574/1-283 DVRVPCTPVA RLNNHRACVN GIAWAPHSSC HICTA----- ---------- ENSP00000403920/1-142 DVRVPCTPVA RLNNHRACVN GIAWAPHSSC HICTAADDHQ ALIWDIQQMP 301 350 bmy_17566T0/1-224 RAIEDPILAY TAEGEINNVQ WASTQPDWIA ICYNNCLEIL RV ENSBTAP00000004550/1-342 RAIEDPILAY TAEGEINNVQ WASTQPDWIA ICYNNCLEIL RV ENSTTRP00000001574/1-283 ---------- ---------- ---------- ---------- -- ENSP00000403920/1-142 RAIEDPILAY TAEGEINNVQ WASTQPDWIA ICYNNCLEIL RV