KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:16 2014 Check: 00 .. Name: ENSP00000052754/1-359 Len: 383 Check: 835 Weight: 1.00 Name: ENSBTAP00000004562/1-360 Len: 383 Check: 893 Weight: 1.00 Name: ENSTTRP00000001260/1-359 Len: 383 Check: 912 Weight: 1.00 Name: bmy_04652T0/1-355 Len: 383 Check: 7981 Weight: 1.00 Name: BACU000983/1-382 Len: 383 Check: 5830 Weight: 1.00 // 1 50 ENSP00000052754/1-359 MKATIILLLL AQVSWAGPFQ QRGLFDFMLE DEASGIGPE- -VPDDRDFEP ENSBTAP00000004562/1-360 MKATIIFLLV AQVSWAGPFQ QKGLFDFMLE DEASGIGPEE HFPEVPEIEP ENSTTRP00000001260/1-359 MKATFIFLLL AQVSWAGPFQ QKGLFDFMLE DEASGIGPDD RFHEVPELES bmy_04652T0/1-355 ---------- ---------- -------MLE DEASGIGPDD RFHEVPEFEP BACU000983/1-382 MKATFIFLLL AQVSWAGPFQ QKGLFDFMLE DEASGIGPDD RFHEVPEFEP 51 100 ENSP00000052754/1-359 SLGPVCPFRC QCHLRVVQCS DLGLDKVPKD LPPDTTLLDL QNNKITEIKD ENSBTAP00000004562/1-360 -MGPVCPFRC QCHLRVVQCS DLGLEKVPKD LPPDTALLDL QNNKITEIKD ENSTTRP00000001260/1-359 --VPVCPFRC QCHLRVVQCS DLGLEKVPKD LPPDTALLDV QNNKITEIKD bmy_04652T0/1-355 -QAPVCPFRC QCHLRVVQCS DLGLDKVPKD LPPDTALLDL QNNKITEIKD BACU000983/1-382 -QAPVCPFRC QCHLRVVQCS DLGLDKVPKD LPPDTALLDL QNNKITEIKD 101 150 ENSP00000052754/1-359 GDFKNLKNLH ALILVNNKIS KVSPGAFTPL VKLERLYLSK NQLKELPEKM ENSBTAP00000004562/1-360 GDFKNLKNLH TLILINNKIS KISPGAFAPL VKLERLYLSK NQLKELPEKM ENSTTRP00000001260/1-359 GDFKNLKNLH TLILINNKIS KISPGAFAPL VKLERLYLSK NQLKELPEKM bmy_04652T0/1-355 GDFKNLKNLH TLILINNKIS KISPGAFAPL VKLERLYLSK NQLKELPEKM BACU000983/1-382 GDFKNLKNLH TLILINNKIS KISPGAFAPL VKLERLYLSK NQLKELPEKM 151 200 ENSP00000052754/1-359 PKTLQELRAH ENEITKVRKV TFNGLNQMIV ---------- ---------- ENSBTAP00000004562/1-360 PKTLQELRVH ENEITKVRKS VFNGLNQMIV ---------- ---------- ENSTTRP00000001260/1-359 PKTLQELRVH ENEITKVRKS VLNGLNQLIV ---------- ---------- bmy_04652T0/1-355 PKTLQELRVH ENEITKVRKS VLNGLNQLIV VDTTLTCNIL KLSSKSFALI BACU000983/1-382 PKTLQELRVH ENEITKVRKS VLTGLNQLIV VDTTLTCNIL KLSSKSFALI 201 250 ENSP00000052754/1-359 --IELGTNPL KSSGIENGAF QGMKKLSYIR IADTNITSIP QGLPPSLTEL ENSBTAP00000004562/1-360 --VELGTNPL KSSGIENGAF QGMKKLSYIR IADTNITTIP QGLPPSLTEL ENSTTRP00000001260/1-359 --VELGTNPL KSSGIENGAF QGMKKLSYIR IADTNITTIP QGLPPSLTEL bmy_04652T0/1-355 AFVELGTNPL KSSGIENGAF QGMKKLSYIR IADTNITTIP QGLPPSLTEL BACU000983/1-382 AFVELGTNPL KSSGIENGAF QGMKKLSYIR IADTNITTIP QGLPPSLTEL 251 300 ENSP00000052754/1-359 HLDGNKISRV DAASLKGLNN LAKLGLSFNS ISAVDNGSLA NTPHLRELHL ENSBTAP00000004562/1-360 HLDGNKITKV DAASLKGLNN LAKLGLSFNS ISAVDNGSLA NTPHLRELHL ENSTTRP00000001260/1-359 HLDGNKITKV DAASLKGLNN LAKLGLGFNS ISAVDNDSLA NTPHLRELHL bmy_04652T0/1-355 HLDGNKITKV DAASLKGLNN LAKLGLSFNS ISGVDNDSLA NTPHLRELHL BACU000983/1-382 HLDGNKIAKV DAASLKGLNN LAKLGLSFNS ISAVDNDSLA NTPHLRELHL 301 350 ENSP00000052754/1-359 DNNKLTRVPG GLAEHKYIQV VYLHNNNISV VGSSDFCPPG HNTKKASYSG ENSBTAP00000004562/1-360 NNNKLVKVPG GLADHKYIQV VYLHNNNISA IGSNDFCPPG YNTKKASYSG ENSTTRP00000001260/1-359 NNNKLIKVPG GLADHKYIQV VYLHNNNISA IGPNDFCPPG YNTKKASYSG bmy_04652T0/1-355 NNNKLIKVPG GLADHKYIQV VYLHNNNISA IGPNDFCPPG YNTKKASYSG BACU000983/1-382 NNNKLIKVPG GLADHKYIQV VYLHNNNISA IGPNDFCPPG YNTKKASYSG 351 400 ENSP00000052754/1-359 VSLFSNPVQY WEIQPSTFRC VYVRSAIQLG NYK ENSBTAP00000004562/1-360 VSLFSNPVQY WEIQPSTFRC VYVRAAVQLG NYK ENSTTRP00000001260/1-359 VSLFSNPVQY WEIQPSTFRC VYVRSAIQLG NYK bmy_04652T0/1-355 VSLFSNPVQY WEIQPSTFRC VYVRSAIQLG NYK BACU000983/1-382 VSLFSNPVQY WEIQPSTFRC VYVRSAIQLG NYK