KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:24:19 2014  Check: 00 ..

 Name: ENSP00000454598/1-219     Len:    251  Check:  2326  Weight:  1.00
 Name: ENSTTRP00000009720/1-206  Len:    251  Check:  7300  Weight:  1.00
 Name: bmy_05278T0/1-233         Len:    251  Check:  7476  Weight:  1.00
 Name: ENSBTAP00000004574/1-206  Len:    251  Check:  228  Weight:  1.00

//


                          1                                                   50
ENSP00000454598/1-219     ---------- ---------- ---------- -MGNAQERPS ETIDRERKRL 
ENSTTRP00000009720/1-206  ---------- ---------- ---------- -MGNTQERPS ETIDRERKRL 
bmy_05278T0/1-233         MGQKRPGRQE DGSCAALWSC LAADCRDRAP TMGNTQERPS ETIDRERKRL 
ENSBTAP00000004574/1-206  ---------- ---------- ---------- -MGNTQERPS ETIDRERKRL 


                          51                                                 100
ENSP00000454598/1-219     VETLQADSGL LLDALLARGV LTGPEYEALD ALPDAERRVR RLLLLVQGKG 
ENSTTRP00000009720/1-206  VETLQSDSGL LLDALLARGV LTGPEYEALD ALPDAERRVR RLLLLVQSKG 
bmy_05278T0/1-233         VETLQSDSGL LLDALLARGV LTGPEYEALD VLPDAERRVR RLLLLVQSKG 
ENSBTAP00000004574/1-206  VETLQADSGL LLDALLARGV LTGPEYEALD ALPDAERRVR RLLLLVQSKG 


                          101                                                150
ENSP00000454598/1-219     EAACQELLRC AQRTAGAPDP AWDWQH-ATG TAAMTLHAQA TGRRRHPARG 
ENSTTRP00000009720/1-206  EAACQELLSC AQRTVRAPDP AWDWQHVGT- YRERSYDPPC PGH-WTPEAA 
bmy_05278T0/1-233         EAACQELLSC AQRTVRAPDP AWDWQHVGTG YRERSYDPPC PGH-WTPEEA 
ENSBTAP00000004574/1-206  EAACQELLSC AQRTVRAPDP TWDWQHVGTG YRERSYDPPC PGH-WTPGAA 


                          151                                                200
ENSP00000454598/1-219     PHAPGCPELQ TLTRPGALRA PRRCNPGPRR SQSQSWKLRP LKRLNRSRSQ 
ENSTTRP00000009720/1-206  GS-TACPWLP RASDCDEARG PGDSEAAQSG TXXXXXX--- --XXXXXXXX 
bmy_05278T0/1-233         GSGTACPWLP RASDCDEARG PEDSEAAQSG TLEET----- --EPELEAET 
ENSBTAP00000004574/1-206  DSGTTCPWLP RAPESDEARG PEDSEAAQSG TLEEA----- --EPELEAET 


                          201                                                250
ENSP00000454598/1-219     SQSWNPRLKQ NQSRNWSQNR TQSPSPTSRK GTSPKIPEGQ SSDRRCPAHA 
ENSTTRP00000009720/1-206  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXS----- 
bmy_05278T0/1-233         SEGAEPELEP QMDPEPEPGT EPEPELE--- -LEPDLEAGD ESEDS----- 
ENSBTAP00000004574/1-206  SEGAEPELDP QMDPEPEPEA EPEPEAEPEP EPEPDFEAGD ESEDS----- 


                          251                                                300
ENSP00000454598/1-219     G 
ENSTTRP00000009720/1-206  - 
bmy_05278T0/1-233         - 
ENSBTAP00000004574/1-206  -