KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:19 2014 Check: 00 .. Name: ENSBTAP00000004583/1-687 Len: 839 Check: 3412 Weight: 1.00 Name: ENSTTRP00000015027/1-687 Len: 839 Check: 2658 Weight: 1.00 Name: bmy_01461T0/1-638 Len: 839 Check: 9355 Weight: 1.00 Name: BACU013644/1-829 Len: 839 Check: 3389 Weight: 1.00 // 1 50 ENSBTAP00000004583/1-687 ---------- ----MNPSAS ---------- ---------- ---------- ENSTTRP00000015027/1-687 ---------- ----MNPSAS ---------- ---------- ---------- bmy_01461T0/1-638 ---------- ----MNPSAS ---------- ---------- ---------- BACU013644/1-829 MAADISESGG HDCKGDPRSN TKLDADYPLR VLYCGGNFFF PLQYCEYMPD 51 100 ENSBTAP00000004583/1-687 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015027/1-687 ---------- ---------- ---------- ---------- ---------- bmy_01461T0/1-638 ---------- ---------- ---------- ---------- ---------- BACU013644/1-829 VAKCRQWLEK NFPNEFAKLT VENSPKQEAG ISEGQGTAGE EEEKKKQKRE 101 150 ENSBTAP00000004583/1-687 --------FL AGR------- ---------- ---------- -----QNIGS ENSTTRP00000015027/1-687 --------FL AGR------- ---------- ---------- -----QNIGS bmy_01461T0/1-638 --------FL AGR------- ---------- ---------- -----QNIGS BACU013644/1-829 IDLKEAQRFF AQKFSCGASV TGEDEIIIQG DFTDDIIDVI QEKWPEGIGS 151 200 ENSBTAP00000004583/1-687 EVEISTIEKQ RKELQLLIGE LKDRDRELND MVAVHQRQLL SWEEDRQKVL ENSTTRP00000015027/1-687 EVEISTIEKQ RRELQLLIGE LKDRDRELND MVAVHQRQLL SWEEDRQKVL bmy_01461T0/1-638 EVEISTIEKQ RRELQLLIGE LKDRDRELND MVAVHQRQLL SWEEDRQKVL BACU013644/1-829 EVEISTIEKQ RRELQLLIGE LKDRDRELND MVAVHQRQLL SWEEDRQKVL 201 250 ENSBTAP00000004583/1-687 TLEERCSKLE GELHKRTEII KSLTKKVKSL ESNQIECQST LQKTQLQLQE ENSTTRP00000015027/1-687 TLEERCSKLE GELHKRTEII RSLTKKVKTL ESNQIEYQST LQKTQLQLQE bmy_01461T0/1-638 TLEERCSKLE GELHKRTEII RSLTKKVKTL ESNQIECQST LQKTQLQLQE BACU013644/1-829 TLEERCSKLE GELHKRTEII RSLTKKVKTL ESNHIECQST LQKTQLQLQE 251 300 ENSBTAP00000004583/1-687 MAQKATHSSL LSEDLEARNE NLSNTLVELS AQVGQLQARE QALTTMIKLK ENSTTRP00000015027/1-687 MAQKATHSTL LSEDLEVRNE NLSNTLVELS AQVGQLQARE QALTTMIKLK bmy_01461T0/1-638 MAQKATHSTL LSEDLEARNE NLSNTLVELS AQVGQLQARE QALTTMIKLK BACU013644/1-829 MAQKATHSTL LSEDLEARNE NLSNTLVELS AQVGQLQARE QALTTMIKLK 301 350 ENSBTAP00000004583/1-687 DKDIIEAVNH IADCSGKFKL LEHALRDAKM VETCIVKEKQ DYKQKLKALK ENSTTRP00000015027/1-687 DKDIIEAVNH IADCSGKFKL LEHALRDAKM VETCIVKEKQ DYKQKLKALK bmy_01461T0/1-638 DKDIIEAVSH IADCSGKFKL LEHALRDAKM VEACIVKEKQ DYKQKLKALK BACU013644/1-829 DKDIIEAVNH IADCSGKFKL LEHALRDAKA VETCIVKEKQ DYKQKLKALK 351 400 ENSBTAP00000004583/1-687 IEVNKLKEDL NEKTTENNEQ REEIIRLKQE KSYLHDELVF TAEREKRKDE ENSTTRP00000015027/1-687 IEVNKLKEDL NEKTTENNGQ REEIIRLKQE KSCLHDELVF AVERDKRKDE bmy_01461T0/1-638 IEVNKLKEDL NEKTTENNEQ REEIIRLKQE KSCLHDELVF TVEREKRKDE BACU013644/1-829 IEVNKLKEDL NEKTTENNEQ REEIIRLKQE KSCLHDELVF TVEREKRKDE 401 450 ENSBTAP00000004583/1-687 LLDIAKSKQE RMNAELHNLR QIYVKQQRDL QFLNFNVENS QELIQIYDSK ENSTTRP00000015027/1-687 LLDIAKSKQE RMSAELHNLR QIYIKQQRDL QFLNFNVESS QELIQIYDSK bmy_01461T0/1-638 LLDIAKSKQE RMSAELHNLR Q--------- ---------- ---------- BACU013644/1-829 LLDIAKSKQE RMSAELHNLR QIYIKQQRDL QFLNFNVENS QELIQIYDSK 451 500 ENSBTAP00000004583/1-687 MEESKGMESS RDMCLSDLEN NHLKVDFKRE KNQKSLVKDQ KFETTLVQQT ENSTTRP00000015027/1-687 VEESKALESS REMCLSDLEN NHLKVDFKRE ENQKSLVKDQ KFETTLVQQN bmy_01461T0/1-638 ---------- ---------- --------RE ENQKSLVKDQ KFETTLVQQN BACU013644/1-829 MEESKALESS REMCLSDLEN NHLKVDFKRE EDQKSLVKDQ KFETTLVQQN 501 550 ENSBTAP00000004583/1-687 RSDKSSCDVC KEKKLQVNTS FGGKSVIAIS SLFAKDLVEK QKSWSLGGKI ENSTTRP00000015027/1-687 KSDESSYDVC KEKKLQVNTS FGGKSVIAIS SLLAKDLVEK QKSWSLGGKI bmy_01461T0/1-638 KSDKSPYDVC KEKKLQVNTS FGGKSVIAVS SLFAKDLVEK QKSWSLGGKI BACU013644/1-829 NSDKSSYDVC KEKKLQVNTS FGGKSVIAVS SLFAKDLVEK QKSWSLGGKI 551 600 ENSBTAP00000004583/1-687 QIEPENKSTF CKIHAKSHKG NGIGIQNEEK QPSETSTSVS DDKWHDVNVY ENSTTRP00000015027/1-687 QTEPENKSTF CKIHAKSPKG NGGGIQNEEK QRSETSTSVA DEKWHDISLY bmy_01461T0/1-638 QTEPENKSTF CKIHAKSPKG NGVGIQNEEK QLSETSTSVS GEKWHDXSLY BACU013644/1-829 QTEPENKSTF CKIHAKSPKG DGVGVQNEEK QLSETSTSVS GEKWHDVSLY 601 650 ENSBTAP00000004583/1-687 LGLASCSDSK QPEKLDVDYQ DHLERPGVSC CHRNEACVDE SD-------M ENSTTRP00000015027/1-687 LGLANCSGSK QPEKLDVKCQ DHLERSGVSC CHKSEACLDE SD-------M bmy_01461T0/1-638 LGLANCSGSK QPEKLDVECQ DHLERSGVSC CHKSEACLDE SDAHLDESNM BACU013644/1-829 LGLANCSGSK QPEKLDVECQ DHLERSGVSC CHKSEACLDE SDARLDESDT 651 700 ENSBTAP00000004583/1-687 WESKCCHPSN FVIEAPGHMS DVEWMSIFKP SKVQRVVRHK SVCTCSESAS ENSTTRP00000015027/1-687 WESKCCHPSS FIIEAPGHLS DVEWMSIFKP SRAQRIVRHK SVCTCSESAS bmy_01461T0/1-638 WESKCCHPSN FTIEAPGHMS DVEWMSIFKP SKVQRIVRHX SVCTCSEXAS BACU013644/1-829 WESKCCHPSN FTIEAPGHMS DVEWMSIFKP SKVQRIVRHK SVCTCSESAS 701 750 ENSBTAP00000004583/1-687 GTKYNSSTSE LIAIQQSHCL DSSKSALRED EKLIETESSS AKKNSSKILL ENSTTRP00000015027/1-687 GTKYNSSTSE LIASQQSHCL GSSKSALRED EKLIETESSS DKKNSSKILL bmy_01461T0/1-638 GTKYNSSTSE LIAIQQSHCL GSSKSALRED EKFIETESSS DKKNSSEILL BACU013644/1-829 GTKYNSSTSE LIAIQQSHCL CSSKSALRED EKFIETESSS DKKNSSEILL 751 800 ENSBTAP00000004583/1-687 VNKDAALPSE KVCISLRNTQ DDFSPTSKLQ RLLAESRQMV TDLELSTLLP ENSTTRP00000015027/1-687 VNKDAALPSE KAGIVLL-SQ DDFSPTSKLQ RLLAESRQMV TDLELSTLLP bmy_01461T0/1-638 VNKDAALPSE K--------- DDFSPTSKLQ RLLAESRQMV TDLELSTLLP BACU013644/1-829 VNKDAALPSE K--------- DDFSPTSKLQ RLLAESRQMV TDLELSTLLP 801 850 ENSBTAP00000004583/1-687 ISSENLSTS- KS-------N MEVSEESAE- --KNTPLGN ENSTTRP00000015027/1-687 ISSENLSSTA KN-------N VEVSEESAE- --KNTLLGN bmy_01461T0/1-638 ISSENLSSSA RNVRGSFSFD PICSIQTLQS LCANVPFC- BACU013644/1-829 MSSENLSSSA RNVRGSFSFD PICSIQTLQL LCTNVPFC-