KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:19 2014 Check: 00 .. Name: ENSP00000334308/1-975 Len: 976 Check: 4840 Weight: 1.00 Name: ENSBTAP00000004584/1-976 Len: 976 Check: 1724 Weight: 1.00 Name: bmy_21688T0/1-887 Len: 976 Check: 2186 Weight: 1.00 Name: ENSTTRP00000010683/1-972 Len: 976 Check: 3322 Weight: 1.00 // 1 50 ENSP00000334308/1-975 MTQQPQDDFD RSVEDAQAWM KAVQDQLQVN DNTQGPRAAL EARLWETEKI ENSBTAP00000004584/1-976 MTQQPQEGFD RSVEDARRWM RAVQERLQIN DNTQGPRTAL EARLRETEKI bmy_21688T0/1-887 MTQQPQEGFA RSMEDAQEWM KAVQERLQIN DNTQGPRAAL EARLRETEKI ENSTTRP00000010683/1-972 MTQQPQEGFA RSMGDAQEWM KAVQERLQIN DNTQGPRAAL EARLRETEKI 51 100 ENSP00000334308/1-975 CQLEPEGRVR VDLVLRMAEA LLACCPGDQK PGILARLKDI KAQWEETVTY ENSBTAP00000004584/1-976 CQLEPEGRVK VDVVLQAAEA LLACCHEDQK TEILARLRDI KAQWEETVTH bmy_21688T0/1-887 CQLEPEGRLK VDMVLRAAEA LLACCHEDQK PEILARLRDV KAQWEETVTY ENSTTRP00000010683/1-972 CQLEPEGRVK VDMVLRAAEA LLACCHEDQK PEILTRLRDV KAQWEETVTY 101 150 ENSP00000334308/1-975 MTHCHSRIEW VWLHWSEYLL ARDEFYRWFQ KMMVTLEPHI ELQLGLKEKQ ENSBTAP00000004584/1-976 MVHCHSRIEW VWLHWSEYLL ARDEFYRWFQ KMTVALAPPV ELQSSLKEKQ bmy_21688T0/1-887 MTHCHSRIEW VWLHWSEYLL ARDEFYRWFQ KMAVVLEPPV ELQLGLKEKR ENSTTRP00000010683/1-972 MTHCHSRIEW VWLHWSEYLL ARDEFYRWFQ KMTVVLEPPV ELQLGLKEKR 151 200 ENSP00000334308/1-975 WQLSHAQVLL HNVDNQAVLL DRLLEEAASL FNRIGDPSVD EDAQKRMKAE ENSBTAP00000004584/1-976 WQLSHAQVLL RNADHQAVLL DRLLEEAASL FNRIGDPSVD EDAQQRMKAE bmy_21688T0/1-887 WQLSHAQVLL HSVGHQAMLL DRLLEEAASL FSRIGDPSVD EDAQEKMKAE ENSTTRP00000010683/1-972 WQLSHAQVLL QNVDNQATLL DRLLEEAASL FNRIGDPSVD EAAQKKLKAX 201 250 ENSP00000334308/1-975 YDAVKAKAQK RVDLLEQVAR EHEEYQAGVD EFQLWLKAVV EKVNGCLGRN ENSBTAP00000004584/1-976 YDAVKAKAQD RVDFLEQVTR EHECFQASVD EFQLWLKAVV ERVDGCMGRK bmy_21688T0/1-887 YDAVKTKAQN RVDLLEHVTQ EHEHFQVSVD EFQLWLKVVV ERVHGCMGRK ENSTTRP00000010683/1-972 XXXXXXXXXN RVDLLEQVTQ EHEHFQLSVD EFQLWLKAVV ERVHGCMGRK 251 300 ENSP00000334308/1-975 CKLPITQRLS TLQDIAKDFP RGEESLETLE EQSAGVIRNT SPLGAEKITG ENSBTAP00000004584/1-976 CRLSTQDRLL ALQGIANDFP KGEESLKRLE EQAVGVTQNT SPLGAEKITR bmy_21688T0/1-887 CQLRTKDRLS ALQDIASDFP RGEESLKRLA EQAVGVIQNT SPLGAEKIAK ENSTTRP00000010683/1-972 CRLSTKDRLS ALQDIASDFP RGEESLRRLE EQAGGVIQSS SPLGAEKITR 301 350 ENSP00000334308/1-975 ELEEMRKVLE KLRALWEEEE ERLRGLLRSR GAWEQQIKQL EAELSEFRMV ENSBTAP00000004584/1-976 DLEEMRDVLE KLRGLWEEEQ GRLRDLVKSK GACEQQRGQL EAELTEFRKD bmy_21688T0/1-887 ELEEMRNVLE KLRALWEEEE GRLQGLLKSR GAYEQQRRQL EAELAEFRKG ENSTTRP00000010683/1-972 ELEEMRNVLE KLRALWEGEE GRLRGLLWSR EAYEQQRRQL EAELAEFRKG 351 400 ENSP00000334308/1-975 LQRLAQEGLQ PAAKAGTEDE LVAHWRRYSA TRAALASEEP RVDRLQAQLK ENSBTAP00000004584/1-976 LQRLAEEGLG TTAKAATEDE LVARWRLYLA TREALATEEP RVDRLQAQLK bmy_21688T0/1-887 LQRLAEEDLE PAAKAGTEDE LVARWRLYSA TRAALAAEEP RVDRLQARLK ENSTTRP00000010683/1-972 LQRLAEEDLE PAAKAGTQDE LVARWRLYSA TRAALAAEEP RVDRLQARLK 401 450 ENSP00000334308/1-975 ELIVFPHNLK PLSDSVIATI QEYQSLKVKS ARLRNAAAVE LWQHFQRPLQ ENSBTAP00000004584/1-976 ELIVSLQDPK PLSDSVVAAI QEYQRMKAKS SRLRNAAATE LWQRFQRHPQ bmy_21688T0/1-887 ELIVFPQNPQ PLADSVVAAL QEHQSMKAKT SRLRNAVGTD LWQHFQRPLQ ENSTTRP00000010683/1-972 ELIVFPEDPQ PLAGSVVSAI QEHQXXXXXX XXXXXXXXXX XXXXXXXXXX 451 500 ENSP00000334308/1-975 DLQLWKALAQ RLLEVTASLP DLPSLHTFLP QIEAALMESS RLKELLTMLQ ENSBTAP00000004584/1-976 DLQLWRELAQ RLLDVTASLP DPPSIHTFLP QIEAALTESS RLKEQLTMLQ bmy_21688T0/1-887 ELQLWRALAQ RLLDVTASLP DLPSIHTFLP QIEAALAESS RLKEQLTMLQ ENSTTRP00000010683/1-972 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXAALTE-S RLKEELTMLQ 501 550 ENSP00000334308/1-975 LKKDLLIGIF GQERATALLE QVAGSMRDRD LLHNSLLQRK SKLQSLLAQH ENSBTAP00000004584/1-976 LKKDLLGSIF GQERATALLE EVATSVRDRD LLHNRLLQRK SKLQSLLAQH bmy_21688T0/1-887 LKKDLLGGIF GQERATALLE ---------- ---------- ---QSSLAQH ENSTTRP00000010683/1-972 L-KDLLGGIF GQERATALLE QVATSVRDRD LLHNRLLQRK SKLQSSLAQH 551 600 ENSP00000334308/1-975 KDFGAAFEPL QRKLLDLQVR VQAEKGLQRD LPGKQAQLSR LQGLQEEGLD ENSBTAP00000004584/1-976 KDFGATFEPL QKKLSDLQIR VQAENGLRRD LPEKQAQLLR LQGLQEEEMD bmy_21688T0/1-887 KDFGAAFDPL QRRLSDLQIR VHAENGLQRD LPGKQAQLSR LQGLQEEGLD ENSTTRP00000010683/1-972 KDFGDAFDPL QRRLSDLQIR VRAENGLQRD LPGKQAQLSR LQGLQEEGLD 601 650 ENSP00000334308/1-975 LGAQMEAARP LVQENPNHQH KMDQLSSDFQ ALQRSLEDLV DRCRQSVQEH ENSBTAP00000004584/1-976 LGSQVEAMRP LFQGNPNHQH KMDQLSAAHQ ALQRSLEDLL EGRQQSLREH bmy_21688T0/1-887 LGVQVEAMRP LVRGNSHHQH RLDQLSSDHR TLHQSLEDLV DTCQQSVREH ENSTTRP00000010683/1-972 LGVQMEAMRP LVQGNSHHQH RMDQLSSDHQ TLHRSLED-V DTCRQSVREH 651 700 ENSP00000334308/1-975 CTFSHQLLEL RQWIVVTTQK LEAHRGEAGP GDAESQEAEF ERLVAEFPEK ENSBTAP00000004584/1-976 CTFNHELLKL RHWISVITQK LEAHRGDTGP WDAQSQETEV ERLLAEFPEK bmy_21688T0/1-887 CTFSHELLEL RQWISVLTQK LEAHRGDTGP WDAQSREVDV EKLLDEFPGK ENSTTRP00000010683/1-972 CTFSHEVLEL RQWISMLTQK LEAHRVDTGP WDAQSREVDV EKLLDEFPAK 701 750 ENSP00000334308/1-975 EAQLSLVEAQ GWLVMEKSSP EGAAVVQEEL RELAESWRAL RLLEESLLSL ENSBTAP00000004584/1-976 EAQLLEMEAL GRLVMEASSL EGAALVQGEL EELTESWRAL RQLEESLLSL bmy_21688T0/1-887 EAQLPLIEAH GRLVMEKSSP EGAAVVQKEL QELVESWGAL RLLGESLLSL ENSTTRP00000010683/1-972 EAQLPLIEAR GRLVMEKSSP EGAAVVQKEL QELVESWGAL RLLRGSLLSL 751 800 ENSP00000334308/1-975 IRNWHLQRM- EVDSGKKMVF TNNIPKSGFL INPMDPIPRH RRRANLLQEE ENSBTAP00000004584/1-976 TRNRQLQRMT EVDSGKKMIF TNNIPKTGFL ILPTDLTSRH RRQAGLLQGQ bmy_21688T0/1-887 IRNRQLQRM- EVDSGKKMIF TNNIPKTGFL ITPTDLISRH HRQANVRQEE ENSTTRP00000010683/1-972 IRNRQLQRM- EVDSGKKLIF TNNIPKTGFL ITPMDLIFRH HRQTNVLQEE 801 850 ENSP00000334308/1-975 EGSHEDFSQL LRNFGQWLQV ENSKLVRIIA MRTSTAEDLR TRKSKLQELE ENSBTAP00000004584/1-976 GGSHEDYSQS LRNFEDWLQE ENSKLVRIIA MKTATAEDLR TRATKLQELE bmy_21688T0/1-887 EGSCEDFSQL LRNFEQWLQV DNSKLVRIIA MRTATATDLR TRETKLQELE ENSTTRP00000010683/1-972 EDSCEDFSQL LRSFEHWLQV DNSKLVRIIA MRNATAKDLR TRETKLQELE 851 900 ENSP00000334308/1-975 ARVPEGQHLF ENLLRLGPAR GTSDELEDLR YQWMLYKSKL KDSGHLLTQS ENSBTAP00000004584/1-976 ARIPEGQHLF ENLLRLRPAS ESSDELEDLR YRWMLYKSKL KDSSHLLTQS bmy_21688T0/1-887 ARLPEGQRLF ENLLRLRPAR GSSDKLEDLR YRWMLYKSKL KDSGHLLVGA ENSTTRP00000010683/1-972 ARVPEGQHLF ENLLRLRPAR GSSDKLEDLR YRWMLYKSKL KDSGHLRTQN 901 950 ENSP00000334308/1-975 SPGEPTGFQK TRRWRGLGSL FRRACCVALP LQLLLLLFLL LLFLLPIREE ENSBTAP00000004584/1-976 PLGEPTGFRK AARWRGLSSL CRKVCCVALP LQLLLLLFLL LLFLLPVGEE bmy_21688T0/1-887 KDAQVPG--- ---------- ---------- ---------- ---------- ENSTTRP00000010683/1-972 SPGEPTGFQK TQRWRGLGSL CRKVCCVALP LQLLLLLFLL LLFLLPVREA 951 1000 ENSP00000334308/1-975 DRSCTLANNF ARSFTLMLRY NGPPPT ENSBTAP00000004584/1-976 NRSCFLANNF ARSLTLMLRY DGPPPT bmy_21688T0/1-887 ---------- ---------- --PGET ENSTTRP00000010683/1-972 DRSCTLANNF ARSFTLTLRY DGPPPT