KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:20 2014 Check: 00 .. Name: ENSTTRP00000010962/1-401 Len: 595 Check: 2956 Weight: 1.00 Name: ENSP00000361929/1-595 Len: 595 Check: 7948 Weight: 1.00 Name: BACU016248/1-595 Len: 595 Check: 339 Weight: 1.00 Name: ENSBTAP00000004595/1-529 Len: 595 Check: 6420 Weight: 1.00 Name: bmy_04091T0/1-474 Len: 595 Check: 4461 Weight: 1.00 // 1 50 ENSTTRP00000010962/1-401 MRAAPAAPLL QLLLLLGPRL EAAGVAEPPL PAVVLAILAR NAEHSLPHYL ENSP00000361929/1-595 MRAARAAPLL QLLLLLGPWL EAAGVAESPL PAVVLAILAR NAEHSLPHYL BACU016248/1-595 MRAAPAAPLL QLLLLLGPRL EAAGVAEPPL PAVVLAILAR NAEHSLPHYL ENSBTAP00000004595/1-529 ---------- ---------- ---------- ---------- ---------- bmy_04091T0/1-474 --MAPAVP-- ---------- STSRAEGTPR CSAQGQSSAG AGDGGEDDDA 51 100 ENSTTRP00000010962/1-401 GALERLDYPR ARMALWCATD HNVDNTTEML QEWLAAVGDD YAAVVWRPEG ENSP00000361929/1-595 GALERLDYPR ARMALWCATD HNVDNTTEML QEWLAAVGDD YAAVVWRPEG BACU016248/1-595 GALERLDYPR ARLALWCATD HNVDNTTEML QEWLAAVGDD YAAVVWRPEG ENSBTAP00000004595/1-529 ---------- ------CATD HNVDNTTAML REWLAAVGDN YAAVVWRPEG bmy_04091T0/1-474 RGTPGSDHG- ---GMTCATD HNVDNTTEML QEWLAAVGDD YAAVVWRPEG 101 150 ENSTTRP00000010962/1-401 EPRSYPDEEG PKHWTKERHQ FLMELKQEAL TFARDWGADY ILFADTDNIL ENSP00000361929/1-595 EPRFYPDEEG PKHWTKERHQ FLMELKQEAL TFARNWGADY ILFADTDNIL BACU016248/1-595 EPRSYPDEEG PKHWTKERHQ FLMELKQEAL TFARDWGADY ILFADTDNIL ENSBTAP00000004595/1-529 EPRSYPDEEG PKHWTKERHQ FLMELKQEAL TFARDWGADY ILFADTDNIL bmy_04091T0/1-474 EPRSYPDEEG PKHWTKERHQ FLMELKQEAL TFARDWGADY ILFADTDNIL 151 200 ENSTTRP00000010962/1-401 TNNQTLRLLI EQGLPVVAPM LDSQTYYSNF WCGITPQGYY RRTADYFPTK ENSP00000361929/1-595 TNNQTLRLLM GQGLPVVAPM LDSQTYYSNF WCGITPQGYY RRTAEYFPTK BACU016248/1-595 TNNQTLRFLI EQGLPVVAPM LDSQTYYSNF WCGITPQGYY RRTADYFPTK ENSBTAP00000004595/1-529 TNNQTLRLLI EPGLPVVAPM LDSQTYYSNF WCGITPQGYY RRTADYFPTK bmy_04091T0/1-474 TNNQTLRLLI EQGLPVVAPM LDSQTYYSNF WCGITPQGYY RRTADYFPTK 201 250 ENSTTRP00000010962/1-401 NRQRRGCFRV PMVHSTFLVS LRAEGTEQLC FYPPHPNYTW PFDDIIVFAY ENSP00000361929/1-595 NRQRRGCFRV PMVHSTFLAS LRAEGADQLA FYPPHPNYTW PFDDIIVFAY BACU016248/1-595 NRQRRGCFHV PMVHSTFLVS LRAEGTERLG FYPPHPNYTW PFDDIIIFAY ENSBTAP00000004595/1-529 NRQRRGCFRV PMVHSTFLVS LRAEGTGQLA FYPPHPNYTW PFDDIIVFAY bmy_04091T0/1-474 NRQRRGCFRV PMVHSTFL-- ---------- ---------- ---------- 251 300 ENSTTRP00000010962/1-401 ACQAAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXHGPP ENSP00000361929/1-595 ACQAAGVSVH VCNEHRYGYM NVPVKSHQGL EDERVNFIHL ILEALVDGPR BACU016248/1-595 ACQAAGVSAH VCNEHRYGYM NVPVKSHQGL EDERVNFIHL ILEALVDGPP ENSBTAP00000004595/1-529 ACQAAGVAVH VCNEQRYGYL NVPVKSHQGL EDERVNFIHL ILEALVDGPP bmy_04091T0/1-474 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000010962/1-401 MWASAHVSRP PKRPSKMGFD EVFVISLARR PNRRERMLSS LWEMEISGRL ENSP00000361929/1-595 MQASAHVTRP SKRPSKIGFD EVFVISLARR PDRRERMLAS LWEMEISGRV BACU016248/1-595 MWASAHVSRP PKRPSKMGFD EVFVISLARR PDRRERMLSS LWEMEISGRL ENSBTAP00000004595/1-529 MWASAHVSRP PKRPSKMGFD EVFVISLARR PDRRERMLTS LWEMEISGRV bmy_04091T0/1-474 ---------- ---------- -VFVISLARR PDRRERMLSS LWEMEISGRL 351 400 ENSTTRP00000010962/1-401 VDAVDGRTLN SSVMRSLGVD LLPGYQDPYS GRTLTKGEVG CFLSHYSIWE ENSP00000361929/1-595 VDAVDGWMLN SSAIRNLGVD LLPGYQDPYS GRTLTKGEVG CFLSHYSIWE BACU016248/1-595 VDAVDGRMLN SSVMRNLGVD LLPGYQDPYS GRTLTKGEVG CFLSHYSIWE ENSBTAP00000004595/1-529 VDAVDGRMLN SSVMRTLGVD LLPGYQDPYS GRTLTKGEVG CFLSHYSIWE bmy_04091T0/1-474 VDAVDGRMLN SSVMRRLGVD LLPGYQDPYS GRTLTKGEVG CFLSHYSIWE 401 450 ENSTTRP00000010962/1-401 E--------- ---------- ---------- ---------- ---------- ENSP00000361929/1-595 EVVARGLARV LVFEDDVRFE SNFRGRLERL MEDVEAEKLS WDLIYLGRKQ BACU016248/1-595 EVVARGLAQV VVFEDDVRFE SNFKMRLEQL MKEVEAEKLP WDLIYLGRKQ ENSBTAP00000004595/1-529 EVVTRGLAQV VVFEDDVRFE SNFKGRLEQL MEEVEAEKLP WDLIYLGRKQ bmy_04091T0/1-474 EVVARGLAQV VVFEDDVRFE SNFKMRLEQL MKEVEAEKFP WDLIYLGRKQ 451 500 ENSTTRP00000010962/1-401 ---------- ---------- ---------- ---------- ---------- ENSP00000361929/1-595 VNPEKETAVE GLPGLVVAGY SYWTLAYALR LAGARKLLAS QPLRRMLPVD BACU016248/1-595 VNPEEEAAVE GLPHLVVASY SYWTLAYVLS LAGARKLLAS QPLRRMLPVD ENSBTAP00000004595/1-529 VNPEEEAVVE GLPHLVAAGY SYWTLAYVLS LAGARKLLAS QPLRRMLPVD bmy_04091T0/1-474 VNPEEEAAVE GLPHLVVASY SYWTLAYVLS LAGARKLLAS QPLRRMLPVD 501 550 ENSTTRP00000010962/1-401 ---------- ---------- ---------- ---------- ---------- ENSP00000361929/1-595 EFLPIMFDQH PNEQYKAHFW PRDLVAFSAQ PLLAAPTHYA GDAEWLSDTE BACU016248/1-595 EFLPIMFDQH PNEQYKAHFW PRDLRAFSVR PLLAAPTHYA GDAEWFSDTE ENSBTAP00000004595/1-529 EFLPIMFDQH PNEQYKAHFW PRDLQAFSAR PLLAAPTHYA GDSEWLSDTE bmy_04091T0/1-474 EFLPIMFDQH PNEQYKAHFW PRDLRAFSAR PLLAAPTHYA GDAEWLSDTE 551 600 ENSTTRP00000010962/1-401 ---------- ---------- ---------- ---------- ----- ENSP00000361929/1-595 TSSPWDDDSG RLISWSGSQK TLRSPRLDLT GSSGHSLQPQ PRDEL BACU016248/1-595 TSSPWDDDSG RLISWSGSYK TLRDPRLDLA GSSGHSLHPH PQDEL ENSBTAP00000004595/1-529 TSSPWDDDSG RLISWTGSYK TLRGPRLDLA GGSGHSLRPH PRDEL bmy_04091T0/1-474 TSSPWDDDSG RLISWSGSYK TLRDPRLDLA GSSGHSLHPH PQDEL