KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:22 2014 Check: 00 .. Name: ENSP00000416915/1-398 Len: 456 Check: 5285 Weight: 1.00 Name: ENSBTAP00000004608/1-399 Len: 456 Check: 6616 Weight: 1.00 Name: bmy_13742T0/1-455 Len: 456 Check: 7448 Weight: 1.00 Name: BACU002496/1-398 Len: 456 Check: 2400 Weight: 1.00 // 1 50 ENSP00000416915/1-398 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004608/1-399 ---------- ---------- ---------- ---------- ---------- bmy_13742T0/1-455 PRGGGNCLRP PALGLAGPPP RLSAPAPPPE QRPLTQLQAA RLLSAHHLGA BACU002496/1-398 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000416915/1-398 -------MES GLLRPAP-VS EVIVLHYNYT GKLRGARYQP GAGLRADAVV ENSBTAP00000004608/1-399 -------MEP GLLRPAPRVS EVILQHYNYT GKLRGTRYQP GAGLRADAVV bmy_13742T0/1-455 GSWGGQPMEP GLLRPAP-VS EVIVLHYNYT GKLRGARYQP GAGLRADAVV BACU002496/1-398 -------MEP GLLRPAP-VS EVIVLHYNYT GKLRGVRYQP GAGLRADAVV 101 150 ENSP00000416915/1-398 CLAVCAFIVL ENLAVLLVLG RHPRFHAPMF LLLGSLTLSD LLAGAAYAAN ENSBTAP00000004608/1-399 CLAVCALIML ENLAVLVVLG RHPRFHAPMF LLLGSLTLSD LLAGAAYAAN bmy_13742T0/1-455 CLAVCALIVL ENLAVLIVLG RHPRFHAPMF LLLGSLTLSD LLAGAAYAAN BACU002496/1-398 CLAVCALIIL ENLAVLIVLG RHPRFHAPMF LLLGSLTLSD LLAGAAYAAN 151 200 ENSP00000416915/1-398 ILLSGPLTLK LSPALWFARE GGVFVALTAS VLSLLAIALE RSLTMARRGP ENSBTAP00000004608/1-399 ILLSGPFTLR LSPGLWFARE GGVFVALSAS VLSLLAIALE RLLTMERRGP bmy_13742T0/1-455 ILLSGPLTLR LSPALWFARE GGVFVALAAS VLSLLAIALE RLLTMERRGP BACU002496/1-398 ILLSGPLTLR LSPALWFARE GGVFVALAAS VLSLLAIALE RLLTMERRGP 201 250 ENSP00000416915/1-398 APVSSRGRTL AMAAAAWGVS LLLGLLPALG WNCLGRLDAC STVLPLYAKA ENSBTAP00000004608/1-399 APASRRGRTL ALAAAAWGLS LLLGLLPALG WNCLGRLEAC STVLPLYAKA bmy_13742T0/1-455 APAARRGRTL ALAAAAWGVS LLLGLLPALG WNCLGRLDAC STVLPLYAKA BACU002496/1-398 APAARRGRTL ALAAAAWGVS LLLGLLPALG WNCLGRLDAC SPGLPLYAKA 251 300 ENSP00000416915/1-398 YVLFCVLAFV GILAAICALY ARIYCQVRAN ARRLPARPGT AGTTSTRARR ENSBTAP00000004608/1-399 YVLFCVLAFL GILAAICALY ARIYCQVRSK ARRLRAHPRT GEGASMRARH bmy_13742T0/1-455 YVLFCVLAFV GILAAICALY ARIYCQVRSK ARRLGTRPGA GEGASTRARR BACU002496/1-398 YVLFCVLAFV GILAAICALY ARIYCQVRSK ARRLGTPPGA GEGASTRARR 301 350 ENSP00000416915/1-398 KPRSLALLRT LSVVLLAFVA CWGPLFLLLL LDVACPARTC PVLLQADPFL ENSBTAP00000004608/1-399 TPRSLALLRT LSVVLLAFVA CWGPLFLLLL LDVACPARAC PVLLQADPFL bmy_13742T0/1-455 TPRSLALLRT LSVVLLAFVA CWGPLFLLLL LDVACPVRAC PVLLQADPFL BACU002496/1-398 TPRSLALLRT LSVVLLAFVA CWGPLFLLLL LDVACPARAC PVLLQADPFL 351 400 ENSP00000416915/1-398 GLAMANSLLN PIIYTLTNRD LRHALLRLVC CGRHSCGRDP SGSQQSASAA ENSBTAP00000004608/1-399 GLAMANSLLN PIIYTFTNLD LRHALLRLVC CNRGPCCRDP GASRRPGSAP bmy_13742T0/1-455 GLAMANSLLN PIIYTFTNRD MRQALLRLLC CGRRWCSLGP GASQPSGSAP BACU002496/1-398 GLAMANSLLN PIIYTFTNRD MRQALLRLLC CGRRWCSLGP GASQPSGSAP 401 450 ENSP00000416915/1-398 EASGGLRRCL PPGLDGSFSG SERSSPQRDG LDTSGSTGSP GAPTAARTLV ENSBTAP00000004608/1-399 GASGDLHRWL PPGLDGSSSR SERSSPQRDG LETSGSTACP GAPTVAGTLV bmy_13742T0/1-455 GASGGLQRWL PPGLDGSSSH SERSSPQRDG LDTNGSTGSP GALTAAWTLV BACU002496/1-398 GASGGLQRWL PPGLDGSSSH SECSSPQRDG LDASGSTGSP GALTAAWTLV 451 500 ENSP00000416915/1-398 SEPAAD ENSBTAP00000004608/1-399 TPPATD bmy_13742T0/1-455 PPPAAD BACU002496/1-398 PAPAAD