KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:22 2014 Check: 00 .. Name: ENSP00000410409/1-278 Len: 303 Check: 8198 Weight: 1.00 Name: ENSBTAP00000004611/1-274 Len: 303 Check: 2502 Weight: 1.00 Name: bmy_22035T0/1-291 Len: 303 Check: 4763 Weight: 1.00 Name: BACU018442/1-265 Len: 303 Check: 1103 Weight: 1.00 Name: ENSTTRP00000001069/1-277 Len: 303 Check: 7692 Weight: 1.00 // 1 50 ENSP00000410409/1-278 MDKSGIDSLD HVTS--DAVE LANRSDNSSD -SSLFKTQCI PYSPKGEKRN ENSBTAP00000004611/1-274 -----MDSLN YTTACDSAVE TENQSDNSSS GSSLFKTQCV PVPPKRRQRN bmy_22035T0/1-291 -----MDSLN YATVSDSAVE IENQSDNSSS GSSLFKTQCV PIPPKRRQRN BACU018442/1-265 ---PGMDSLN YATVSDSAVE IENQSDNSSS GSSLFKTQCV PIPPKRRQRN ENSTTRP00000001069/1-277 MEKPGMDSIN YATASDSAVE IENQSDNSSS GSSLFKTQCV PIPRKRRQRN 51 100 ENSP00000410409/1-278 PIRKFVRTPE SVHASDSSSD SSFEPIPLTI KAIFERFKNR KKRYKKKKKR ENSBTAP00000004611/1-274 TIRKFVHIPK NTQATESSSD SSIEPRPLTL KAIFERFKNK K---RKRKKK bmy_22035T0/1-291 PVRKFVHKPE STQARDSSSD SSIEPRPLTL KAIFERFKK- ----KKRKKR BACU018442/1-265 PIRKFVHKPE STQARDSSSD SSIEPRPLTL KAIFERFKK- ----KKRKKR ENSTTRP00000001069/1-277 PIRKFVHTPE STQARDSSSD SSIEPRPLTL KAIFERFKK- ----KKRKKR 101 150 ENSP00000410409/1-278 RYQPTGRPRG RPEGRRNPIY SLIDKKKQFR SRGSGFPFLE SENEKNA-PW ENSBTAP00000004611/1-274 KYKPTGRSVG RPKGRRTTRY SQIT-EKQFK DKRPGFPFLE SENGRKPLPW bmy_22035T0/1-291 KYKPTGRSRG RPKGRRNTRI SQIN-KKQFK DKGPGFPFLE SGNGRKLLPW BACU018442/1-265 KYKPTGRSRG RPKGRRNTRS SQIN-KKQFK DKGPGFPFLE SGNGRKPLPW ENSTTRP00000001069/1-277 KYKPTGRSRG RPKGRRNTRS SQIN-KKQFK DKGSGFPFLE SENGRKPLPW 151 200 ENSP00000410409/1-278 RKILTFEQAV ARGFFNYIEK LKYEHHLKES LKQMNVGEDL ENEDFDSRRY ENSBTAP00000004611/1-274 RKILTFEQAV ARGFFNYLEK LKYEYYLKES LKQMNVAEDL EKDDLDSRRY bmy_22035T0/1-291 RKILTFEQAV ARGFFNYLEK LKYEYHLKES LKQMNVGEDL EKEDFDSRRY BACU018442/1-265 RKILTFEQAV ARGFFNYLEK LKYEYHLKES LKQMNVGEDL EKEDFDSRRY ENSTTRP00000001069/1-277 RKILTFEQAV ARGFFNYLEK LKYEYHLKES LKQMNVGEDL EKEDFDSRRY 201 250 ENSP00000410409/1-278 KFLDDDGSIS PIEESTAED- ---------- ------EDAT HLEDNEC--D ENSBTAP00000004611/1-274 RYLDDDGSLS PIEESAAEE- ---------- ------ETAA NLEHDEC--D bmy_22035T0/1-291 RYLDDDGSLS PIEESAFERF NALGAGNARI KIRILWIIGE NMNYQYCISK BACU018442/1-265 RYLDDDGSIS PIEESAAEE- ---------- ------EIAT NLEHDEC--D ENSTTRP00000001069/1-277 RYLDDDGSIS PIEESAAEE- ---------- ------EIAT NLEHDEC--D 251 300 ENSP00000410409/1-278 IKLAGDS-FI VSSEFPVRL- SVYLEEEDIT EEAALSKKRA TKAKNTGQRG ENSBTAP00000004611/1-274 IKLVENSYFI ISSEFPKKKQ NVHLDQEEYT EETALLKKRT SKSK-HWIED bmy_22035T0/1-291 NNTIEDNYFI ISSELPKKK- NVYLEQEEYT EEAALPKKRA SKSKKHWTED BACU018442/1-265 IKLVEDNYFI ISSELPKKK- NVYLEQEENT EEAALPKKRA SKSK------ ENSTTRP00000001069/1-277 IKLVEDNYFI ISSEIPKKK- NVYLEQEEYT EEAALPKKRA SKSKNTGQRG 301 350 ENSP00000410409/1-278 LKM ENSBTAP00000004611/1-274 KMA bmy_22035T0/1-291 RMA BACU018442/1-265 --- ENSTTRP00000001069/1-277 LKI