KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:22 2014 Check: 00 .. Name: BACU003543/1-249 Len: 252 Check: 450 Weight: 1.00 Name: ENSP00000381607/1-210 Len: 252 Check: 868 Weight: 1.00 Name: ENSBTAP00000004615/1-210 Len: 252 Check: 1497 Weight: 1.00 Name: ENSTTRP00000003517/1-224 Len: 252 Check: 2691 Weight: 1.00 Name: bmy_07844T0/1-246 Len: 252 Check: 1648 Weight: 1.00 // 1 50 BACU003543/1-249 MLVKPLLCAL LGAGNQSLPE TGHGGARAGK GPTGSREEK- --LPPYTIVY ENSP00000381607/1-210 ---------- ---------- ---------- ---------- --MPPYTVVY ENSBTAP00000004615/1-210 ---------- ---------- ---------- ---------- --MPPYTIVY ENSTTRP00000003517/1-224 ---------- ---------- ------RRSS VAAAAAEVRV AIMPPYTIVY bmy_07844T0/1-246 ----STVGRA GAGRAHPYKA RGRHRGRWSS AAAAVAEVRV VIMPPYTIVY 51 100 BACU003543/1-249 FPTRGRCEAM RMLLADQGQS WKEEVVTKES WLQGPLKASC LYGQLPKFQD ENSP00000381607/1-210 FPVRGRCAAL RMLLADQGQS WKEEVVTVET WQEGSLKASC LYGQLPKFQD ENSBTAP00000004615/1-210 FPVQGRCEAM RMLLADQGQS WKEEVVAMQS WLQGPLKASC LYGQLPKFQD ENSTTRP00000003517/1-224 FPVRGRCEAM RMLLADQDQS WKEEVVTMET WP--SLKASC LYGQLPKFQD bmy_07844T0/1-246 FPVRGRCEAM RMLLADQGQS WKEEVVTMET WP--SLKASC LYGQLPKFQD 101 150 BACU003543/1-249 GDLILYQSNA ILRHLGRSFG LYGKDQQEAA LVDMVNDGVE DLRRHCGHLI ENSP00000381607/1-210 GDLTLYQSNT ILRHLGRTLG LYGKDQQEAA LVDMVNDGVE DLRCKYISLI ENSBTAP00000004615/1-210 GDLTLYQSNA ILRHLGRTLG LYGKDQQEAA LVDMVNDGVE DLRCKYVSLI ENSTTRP00000003517/1-224 GDLTLYQSNA ILRHLGRSLG LYGKDQREAA LVDVVNDGVE DLRCKYVTLI bmy_07844T0/1-246 GDLTLYQSNA ILRHLGRSLG LYGKDQQEAA LVDMVNDGVE DLRCKYGTLI 151 200 BACU003543/1-249 HHRHEEDKAQ YVQELPGHLK PFETLLSQNQ GGQAFIVGDQ ISFADYNLLD ENSP00000381607/1-210 YTNYEAGKDD YVKALPGQLK PFETLLSQNQ GGKTFIVGDQ ISFADYNLLD ENSBTAP00000004615/1-210 YTNYEAGKED YVKALPQHLK PFETLLSQNK GGQAFIVGDQ ISFADYNLLD ENSTTRP00000003517/1-224 YTNYEAGKDD YVKALPQHLK PFETLLSQSQ GGQAFIVGNQ ISFADYNLLD bmy_07844T0/1-246 YTNYEAGKED YVKALPQHLK PFETLLSQNH GGQAFIVGNQ ISFADYNLLD 201 250 BACU003543/1-249 LLRSHQVLVP GCLDSFPLLS AYVARLSARP KLQAFLASPE HVNRPVFASR ENSP00000381607/1-210 LLLIHEVLAP GCLDAFPLLS AYVGRLSARP KLKAFLASPE YVNLPINGNG ENSBTAP00000004615/1-210 LLRIHQVLAP SCLDSFPLLS AYVARLNSRP KLKAFLASPE HMNRPINGNG ENSTTRP00000003517/1-224 LLRIHQVLAP GCLDSFPLLS AYVARLSARP KLQAFLASPE HVNRPINGNR bmy_07844T0/1-246 LLRIHQVLAS SCLDSFPLLS AYVARLSARP KLQAFLASPE HVNRPINGNR 251 300 BACU003543/1-249 KI ENSP00000381607/1-210 KQ ENSBTAP00000004615/1-210 KQ ENSTTRP00000003517/1-224 KQ bmy_07844T0/1-246 KQ