KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:26 2014 Check: 00 .. Name: bmy_17141T0/1-317 Len: 545 Check: 4833 Weight: 1.00 Name: BACU010686/1-393 Len: 545 Check: 3401 Weight: 1.00 Name: ENSP00000370891/1-534 Len: 545 Check: 3420 Weight: 1.00 Name: ENSTTRP00000010224/1-402 Len: 545 Check: 7896 Weight: 1.00 Name: ENSBTAP00000004632/1-402 Len: 545 Check: 7057 Weight: 1.00 // 1 50 bmy_17141T0/1-317 MGHQEPPLAR VRAGRAAYIK RLRKGLSWRE HVESRGSPDA QLSPESTAAV BACU010686/1-393 MGHQEPPLAR VRAGRAAYIK RLRKGFSWRE HVESRGSPDA QLSPESTAAV ENSP00000370891/1-534 MGHQESPLAR APAGGAAYVK RLCKGLSWRE HVESHGSLGA QASPASAA-- ENSTTRP00000010224/1-402 ---------- ---------- --------ME TGEEDGARRG TQSPE----- ENSBTAP00000004632/1-402 ---------- ---------- --------ME TGEEDGARRG TQSPE----- 51 100 bmy_17141T0/1-317 TRAAAGSVAR PTRATVSRAA RYPKQPWPGA DHPQLGALGG KRAARKWKGA BACU010686/1-393 TRAVAGSVAR PTRATVSRAA ---------- ---------- ---------- ENSP00000370891/1-534 --AAEGSATR RARAATSRAA RSRRQPGPGA DHPQAGAPGG KRAARKWRCA ENSTTRP00000010224/1-402 ---------R KRRSPVPRAL SA-------- ---------- ---------- ENSBTAP00000004632/1-402 ---------R KRRSPVPRAL SA-------- ---------- ---------- 101 150 bmy_17141T0/1-317 GQVTIQGPAP PRPGTGRRDE AGGSRAAPLL LPPPPAAMET GEEDGARRAE BACU010686/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000370891/1-534 GQVTIQGPAP PRPRAGRRDE AGGARAAPLL LPPPPAAMET GK-DGARRGT ENSTTRP00000010224/1-402 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004632/1-402 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_17141T0/1-317 ---------- -------KAK PSAAGAQREA EAGGGGPGHG SGGGRGPGRG BACU010686/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000370891/1-534 QSPERKRRSP VPRAPSTKLR PAAAARAMDP VA-AEAPGEA FLARRRPEGG ENSTTRP00000010224/1-402 ---------- -------KLR PAAVAQAMDP VA-AEAPGEA YLARRRPEGG ENSBTAP00000004632/1-402 ---------- -------KLR PAAAAQAMDP VA-AEAPGEA YLARRRPEGG 201 250 bmy_17141T0/1-317 LPGAAAAGGR RRVGLLAEIG RGSYGVVYEA VAGRSGARVA VKKIRCDAPE BACU010686/1-393 ---------- ---------- --SYGVVYEA VAGRSGARVA VKKIRCDAPE ENSP00000370891/1-534 -----GGSAR PRYSLLAEIG RGSYGVVYEA VAGRSGARVA VKKIRCDAPE ENSTTRP00000010224/1-402 -----GGSAR PRYSLLAEIG RGSYGVVYEA VAGRSGARVA VKKIRCDAPE ENSBTAP00000004632/1-402 -----GGSAR PRYSLLAEIG RGSYGVVYEA VAGRSGARVA VKKIRCDAPE 251 300 bmy_17141T0/1-317 NVELALAEFW ALTSLKRRHQ NVVQFEECVL QRNGLAQRMS HGNKSSQLYL BACU010686/1-393 NVELALAEFW ALTSLKRRHQ NVVQFEECVL QRNGLAQRMS HGNKSSQLYL ENSP00000370891/1-534 NVELALAEFW ALTSLKRRHQ NVVQFEECVL QRNGLAQRMS HGNKSSQLYL ENSTTRP00000010224/1-402 NVELALAEFW ALTSLKRRHQ NVVQFEECVL QRNGLAQRMS HGNKSSQLYL ENSBTAP00000004632/1-402 NVELALAEFW ALTSLKRRHQ NVVQFEECVL QRNGLAQRMS HGNKSSQLYL 301 350 bmy_17141T0/1-317 RLVETSLKG- ---------- ---------- ---------- ---------- BACU010686/1-393 RLVETSLKGE RILGYAEEPC YLWFVMEFCE GGDLNQYVLS RRPDPATNKS ENSP00000370891/1-534 RLVETSLKGE RILGYAEEPC YLWFVMEFCE GGDLNQYVLS RRPDPATNKS ENSTTRP00000010224/1-402 RLVETSLKGE RILGYAEEPC YLWFVMEFCE GGDLNQYVLS RRPDPATNKS ENSBTAP00000004632/1-402 RLVETSLKGE RILGYAEEPC YLWFVMEFCE GGDLNQYVLS RRPDPATNKS 351 400 bmy_17141T0/1-317 ---------- ---------- ---------- ---------- ---------- BACU010686/1-393 FMLQLTSAIA FLHKNHIVHR DLKPDNILIT ERSGTPILKV ADFGLSKVCA ENSP00000370891/1-534 FMLQLTSAIA FLHKNHIVHR DLKPDNILIT ERSGTPILKV ADFGLSKVCA ENSTTRP00000010224/1-402 FMLQLTSAIA FLHKNHIVHR DLKPDNILIT ERSGTPILKV ADFGLSKVCA ENSBTAP00000004632/1-402 FMLQLTSAIA FLHKNHIVHR DLKPDNILIT ERSGTPILKV ADFGLSKVCA 401 450 bmy_17141T0/1-317 ----RNAEGR PGHA------ ---------- -------WPG ---------- BACU010686/1-393 GLAPRGKEGN QDNKNVNVNK YWLSSACGSD FYMAPEVWEG HYTAKADIFA ENSP00000370891/1-534 GLAPRGKEGN QDNKNVNVNK YWLSSACGSD FYMAPEVWEG HYTAKADIFA ENSTTRP00000010224/1-402 GLAPRGKEGN QDNKNVNVNK YWLSSACGSD FYMAPEVWEG HYTAKADIFA ENSBTAP00000004632/1-402 GLAPRGKEGN PDNKNVNVNK YWLSSACGSD FYMAPEVWEG HYTAKADIFA 451 500 bmy_17141T0/1-317 ---------- ---------P TNLLGS---- ---------- ---------- BACU010686/1-393 LGIIIWAMIE RITFIDSETK KELLGTYIKQ GTEIVPVGEA LLENPKMELH ENSP00000370891/1-534 LGIIIWAMIE RITFIDSETK KELLGTYIKQ GTEIVPVGEA LLENPKMELH ENSTTRP00000010224/1-402 LGIIIWAMIE RITFIDSETK KELLGTYIKQ GTEIVPVGEA LLENPKMELH ENSBTAP00000004632/1-402 LGIIIWAMIE RITFIDSETK KELLGTYIKQ GTEIVPVGEA LLENPKMELH 501 550 bmy_17141T0/1-317 ---------- ---------- ----AQTDP- ---------- ----- BACU010686/1-393 IPQKRRTSMS EGIKQLLKDM LAANPQDRPD AFELETRMDQ VTCAA ENSP00000370891/1-534 IPQKRRTSMS EGIKQLLKDM LAANPQDRPD AFELETRMDQ VTCAA ENSTTRP00000010224/1-402 IPQKRRTSMS EGIKQLLKDM LAANPQDRPD AFELETRMDQ VTCAA ENSBTAP00000004632/1-402 IPQKRRTSMS EGIKQLLKDM LAANPQDRPD AFELETRMDQ VTCAA