KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:26 2014 Check: 00 .. Name: ENSBTAP00000004635/1-459 Len: 468 Check: 759 Weight: 1.00 Name: ENSP00000265983/1-462 Len: 468 Check: 5322 Weight: 1.00 Name: bmy_13090T0/1-384 Len: 468 Check: 8662 Weight: 1.00 Name: BACU004494/1-455 Len: 468 Check: 4200 Weight: 1.00 // 1 50 ENSBTAP00000004635/1-459 MARALRVPVA LWLLGLCWSL AKAHPLARAP ELGHGVEGGN VAKPDPEVTE ENSP00000265983/1-462 MARVLGAPVA LGLWSLCWSL AIATPLPPTS AHGNVAEGE- -TKPDPDVTE bmy_13090T0/1-384 MAPALGTPVV LWLLGLCWSL ANAHPLSLAN APRHEAEGGN ATKLDPDVIE BACU004494/1-455 MARALGTPVV LWLLGLCWSL ANAHPLSLAN APRHEAEGGN ATKLDPDVME 51 100 ENSBTAP00000004635/1-459 RCSDGWGFDA TTLDEHGNML FLKGEFVWKG HAWARQLISE RWKDAPSPVD ENSP00000265983/1-462 RCSDGWSFDA TTLDDNGTML FFKGEFVWKS HKWDRELISE RWKNFPSPVD bmy_13090T0/1-384 RCSDGWGFDA TTLDEHGTML FFKGEFVWKG HNWTQELISE RWKDVPGPVD BACU004494/1-455 RCSDGWGFDA TTLDEHGTML FFKGEFVWKG HNWTQELISE RWKDVRGPVD 101 150 ENSBTAP00000004635/1-459 AAFRYDRNSV LLIKGDKFWV YPPEKGEE-Y PKLLQEKFPG IPFPLDAAVE ENSP00000265983/1-462 AAFRQGHNSV FLIKGDKVWV YPPEKKEKGY PKLLQDEFPG IPSPLDAAVE bmy_13090T0/1-384 AAFRHGHDRV FLIKGDSIWE YPPEKKDK-Y PKLLQEEFPG IPSPVDAAVE BACU004494/1-455 AAFRHGHDRV FLIKGDKVWE YPPEKESK-Y PKLLQEEFPG IPSPVDAAVE 151 200 ENSBTAP00000004635/1-459 CHRGECSHEG VFFFQGNHTW FWDFSTKTIK KRSWPAVGNC SSAIRWLNRY ENSP00000265983/1-462 CHRGECQAEG VLFFQGDREW FWDLATGTMK ERSWPAVGNC SSALRWLGRY bmy_13090T0/1-384 CHHEECLHEG VLFFQG---- ---------- ---------- ---------- BACU004494/1-455 CHHEECLHEG VLFFQGNHMR FWDFTTKTVK KRSWQAVGNC SSAMRWLSHY 201 250 ENSBTAP00000004635/1-459 YCFRGNKFLR FDPVTGEVNS TYPRDVRDYF MSCPNRGHAH RNATQHMDK- ENSP00000265983/1-462 YCFQGNQFLR FDPVRGEVPP RYPRDVRDYF MPCPGRGHGH RNGTGHGNST bmy_13090T0/1-384 ---------- ---------- ---------- -------HAH RNVTRHGDK- BACU004494/1-455 YCFWGNQFLR FNPVTGDMYP NYPLDVRDYF MPCPGRGHAH RKVTHHRDK- 251 300 ENSBTAP00000004635/1-459 -------RCS PHLVLSALLS DNHSATYAFS ENHYWRLDSS RDGWHSWRIE ENSP00000265983/1-462 HHGPEYMRCS PHLVLSALTS DNHGATYAFS GTHYWRLDTS RDGWHSWPIA bmy_13090T0/1-384 -------RCS PDLVLSALLS DKHGATYAFS GSRYWRLDTS RDGWHSWPIE BACU004494/1-455 -------RCS PDLVLSALLS DKHGATYAFS GSHYWRLDTS RDGWHSWPIE 301 350 ENSBTAP00000004635/1-459 HLWPQGPSTV DAAFLWDKKL YLIQGTQVYI FLTRAGYTLV KDYPKQLEKE ENSP00000265983/1-462 HQWPQGPSAV DAAFSWEEKL YLVQGTQVYV FLTKGGYTLV SGYPKRLEKE bmy_13090T0/1-384 HLWPHGPSTV DTAFSWEDKL YLIQGTEVYI FLTKGGYTLV DGYPKQLEKE BACU004494/1-455 HLWPHGPSTV DTAFSWDDKL YLIQGTEVYI FLTKGGYSLV DGYPKRLEKE 351 400 ENSBTAP00000004635/1-459 FGSPDGVCLH SVDAAFTCPG SSQLYIMAGQ KLWRLDLNLG AQATWTELPW ENSP00000265983/1-462 VGTPHGIILD SVDAAFICPG SSRLHIMAGR RLWWLDLKSG AQATWTELPW bmy_13090T0/1-384 FGSPHGISLD TVDAAFTCPG SSLLHVMAGR QLWWLDLKLG AQATWTELPW BACU004494/1-455 FGSPHGINLD TVDAAFTCPG SSLLHVMAGR QLWWLDLKLG AQATWTELPW 401 450 ENSBTAP00000004635/1-459 LHTKVDGALC TEKSLGPHSC SANGLGLYLV QGPNLYCYKD VEELSKTKDL ENSP00000265983/1-462 PHEKVDGALC MEKSLGPNSC SANGPGLYLI HGPNLYCYSD VEKLNAAKAL bmy_13090T0/1-384 PHEKVDAALC TEKSLGPNSC SANGLGLYLV QGPNLYCYRD VEKLNVTEAL BACU004494/1-455 PHEKVDAALC TEKSLGPNSC SANGLGLYLV QGPNLYCYRD VEKLNVTEAL 451 500 ENSBTAP00000004635/1-459 PQAQRMNSLL GCAPHQHS ENSP00000265983/1-462 PQPQNVTSLL GC-TH--- bmy_13090T0/1-384 PQPQKVNSLL GC-LH--- BACU004494/1-455 PQPQKVNSLL GC-PH---