KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:26 2014 Check: 00 .. Name: ENSTTRP00000012183/1-743 Len: 822 Check: 2147 Weight: 1.00 Name: ENSP00000433102/1-744 Len: 822 Check: 2907 Weight: 1.00 Name: ENSBTAP00000004636/1-744 Len: 822 Check: 2433 Weight: 1.00 Name: BACU004493/1-711 Len: 822 Check: 2801 Weight: 1.00 Name: bmy_13091T0/1-787 Len: 822 Check: 8021 Weight: 1.00 // 1 50 ENSTTRP00000012183/1-743 ---------- ---------- ---------- ---------- ---MAKREDS ENSP00000433102/1-744 ---------- ---------- ---------- ---------- ---MAKREDS ENSBTAP00000004636/1-744 ---------- ---------- ---------- ---------- ---MAKREDS BACU004493/1-711 ---------- ---------- ---------- ---------- ---------- bmy_13091T0/1-787 PGGRALAAAA APRAPRSGRS PGLGPPILPR RGWCEWQEPS VGTMAKREDS 51 100 ENSTTRP00000012183/1-743 PGPEVQPMDK QFLVCSICLD RYRCPKVLPC LHTFCERCLQ NYIPAQSLTL ENSP00000433102/1-744 PGPEVQPMDK QFLVCSICLD RYQCPKVLPC LHTFCERCLQ NYIPAQSLTL ENSBTAP00000004636/1-744 PGPEVQPMDK QFLVCSICLD RYRCPKVLPC LHTFCERCLQ NYIPAQSLTL BACU004493/1-711 -------MDK QFLVCSICLD RYRCPKVLPC LHTFCERCLQ NYIPAQSLTL bmy_13091T0/1-787 PGPEVQPMDK QFLVCSICLD RYRCPKVLPC LHTFCERCLQ NYIPAQSLTL 101 150 ENSTTRP00000012183/1-743 SCPVCRQTSI LPEQGVSALQ NNFFISSLME AMQQAPDGAH DPEDPHPLSA ENSP00000433102/1-744 SCPVCRQTSI LPEQGVSALQ NNFFISSLME AMQQAPDGAH DPEDPHPLSV ENSBTAP00000004636/1-744 SCPVCRQTSI LPEQGVSALQ NNFFISSLME AMQQAPDGAH DPEDPHPLSA BACU004493/1-711 SCPVCRQTSI LPEQGVSALQ NNFFISSLME AMQQAPDGAH DPEDPHPLSA bmy_13091T0/1-787 SCPVCRQTSI LPEQGVSALQ NNFFISSLME AMQQAPDGAH DPEDPHPLSA 151 200 ENSTTRP00000012183/1-743 VAGRPLSCPN HEGKTMEFYC EACETAMCGE CRAGEHREHG TVLLRDVVEQ ENSP00000433102/1-744 VAGRPLSCPN HEGKTMEFYC EACETAMCGE CRAGEHREHG TVLLRDVVEQ ENSBTAP00000004636/1-744 VAGRPLSCPN HEGKTMEFYC EACETAMCGE CRAGEHREHG TVLLRDVVEQ BACU004493/1-711 VAGRPLSCPN HEGK------ ---------- ---------- ---------- bmy_13091T0/1-787 VAGRPLSCPN HEGKTMEFYC EACETAMCGE CRAGEHREHG TVLLRDVVEQ 201 250 ENSTTRP00000012183/1-743 HKAALQRQLE AVRGRLPQLS TAIALVGGIN QQLQERKAEA LAQISAAFED ENSP00000433102/1-744 HKAALQRQLE AVRGRLPQLS AAIALVGGIS QQLQERKAEA LAQISAAFED ENSBTAP00000004636/1-744 HKAALQRQLE AVRGRLPQLS AAIALVGGIS QQLQERKAEA LAQISSAFED BACU004493/1-711 ---------- --------LS AAIALVGGIS QQLQERKAEA LAQISAAFED bmy_13091T0/1-787 HKAALQRQLE AVRGRLPQLS AAIALVGGIS QQLQERKAEA LAQISAAFED 251 300 ENSTTRP00000012183/1-743 LEQALQQRKQ ALVSDXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000433102/1-744 LEQALQQRKQ ALVSDLETIC GAKQKVLQSQ LDTLRQGQEH IGSSCSFAEQ ENSBTAP00000004636/1-744 LEQALQQRKQ ALVSDLEAIC GAKQKVLQTQ LDTLRQGQEH IGSSCSFAEQ BACU004493/1-711 LEQALQQRKQ ALVSDLEAIC GAKQKVLQTQ LDTLRQGQEH IGSSCSFAEQ bmy_13091T0/1-787 LEQALQQRKQ ALVSDLEAIC GAKQKVLQTQ LDTLRQGQEH IGSSCSFAEQ 301 350 ENSTTRP00000012183/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000433102/1-744 ALRLGSAPEV LLVRKHMRER LAALAAQAFP ERPHENAQLE LVLEVDGLRR ENSBTAP00000004636/1-744 ALRLGSAPEV LLVRKHMRER LAALASQAFP ERPHENAQLE LVLEVDGLRR BACU004493/1-711 ALRLGSAPEV LLVRKHMRER LAALAAQAFP ERPHENAQLE LVLEVDGLRR bmy_13091T0/1-787 ALRLGSAPEV LLVRKHMRER LAALAAQAFP ERPHENAQLE LALEVDGLRR 351 400 ENSTTRP00000012183/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000433102/1-744 SVLNLGALLT TSATAHETVA TGEGLRQALV GQPASLTVTT KDKDGRLVRT ENSBTAP00000004636/1-744 SVLNLGALLT TSATAHETVA TGEGLRQALV GQPASLTVTT KDKDGRLVRT BACU004493/1-711 SVLNLGALLT TSATAHETVA TGEGLRQALV GQPASLTVTT KDKDGRLVRT bmy_13091T0/1-787 SVLNLGALLT TSATAHETVA TGEGLRQALV GQPASLTVTT KDKDGRLVRT 401 450 ENSTTRP00000012183/1-743 XXXXXXXXXX XXXXTRLPVP VVDHKNGTYE L-YTARSEDE LLLSVLLYEQ ENSP00000433102/1-744 GSAELRAEIT GPDGTRLPVP VVDHKNGTYE LVYTARTEGE LLLSVLLYGQ ENSBTAP00000004636/1-744 GSAELRAEIT GPDGTRLPVP VVDHKNGTYE LVYTARTEGE LLLSVLLYGQ BACU004493/1-711 GSAELRAEIT GPDGTRLPVP VVDHKNGTYE LVYTARTEGE LLLSVLLYGQ bmy_13091T0/1-787 GSAELHAEIT GPDGTRLPVP VVDHKNGTYE LVYTARTEGE LLLSVLLYGQ 451 500 ENSTTRP00000012183/1-743 PVRGSPFRVR ALRPGDVPPS PDDVKRRVKS PGGPGSHVRQ KAVRRPSSMY ENSP00000433102/1-744 PVRGSPFRVR ALRPGDLPPS PDDVKRRVKS PGGPGSHVRQ KAVRRPSSMY ENSBTAP00000004636/1-744 PVRGSPFRVR ALRPGDLPPS PDDVKRRVKS PGGPGSHVRQ KAVRRPSSMY BACU004493/1-711 PVRGSPFRVR ALRPGDLPPS PDDVKRRVKS PGGPGSHVRQ KAVRRPSSMY bmy_13091T0/1-787 PVRGSPFRVR ALRPGDLPPS PDDVKRRVKS PGGPGSHVRQ KAVRRPSSMY 501 550 ENSTTRP00000012183/1-743 STGGKRKDNP IEDELVFRV- ---------- ---------- ---------- ENSP00000433102/1-744 STGGKRKDNP IEDELVFRV- ---------- ---------- ---------- ENSBTAP00000004636/1-744 STGGKRKDNP IEDELVFRV- ---------- ---------- ---------- BACU004493/1-711 STGGKRKDNP IEDELVFRVG TEGRGRSQRG DGEGPETEND LSVNFLLPPR bmy_13091T0/1-787 STGGKRKDNP IEDELVFRV- ---------- ---------- ---------- 551 600 ENSTTRP00000012183/1-743 ----GSRGRE KGEFTNLQGV SAASSGRIVV ADSNNQCIQV FSNEGQFKFR ENSP00000433102/1-744 ----GSRGRE KGEFTNLQGV SAASSGRIVV ADSNNQCIQV FSNEGQFKFR ENSBTAP00000004636/1-744 ----GSRGRE KGEFTNLQGV SAASSGRIVV ADSNNQCIQV FSNEGQFKFR BACU004493/1-711 FFPTGSRGRE KGEFTNLQGV SAASSGRIVV ADSNNQCIQV FSNEGQFKFR bmy_13091T0/1-787 ----GSRGRE KGEFTNLQGV SAASSGRIVV ADSNNQCIQV FSNEGQFKFR 601 650 ENSTTRP00000012183/1-743 FGVRGRSPGQ LQRPTGVAVD TNGDIIVADY DNRWVSIFSP EGKFKTKLGA ENSP00000433102/1-744 FGVRGRSPGQ LQRPTGVAVD TNGDIIVADY DNRWVSIFSP EGKFKTKIGA ENSBTAP00000004636/1-744 FGVRGRSPGQ LQRPTGVAVD TNGDIIVADY DNRWVSIFSP EGKFKTKIGA BACU004493/1-711 FGVRGRSPGQ LQRPTGVAVD TNGDIIVADY DNRWVSIFSP EGKFKTKIGA bmy_13091T0/1-787 FGVRGRSPGQ LQRPTGVAVD TNGDIIVADY DNRWVSIFSP EGKFKTKIGA 651 700 ENSTTRP00000012183/1-743 GRLMGPKGVA VDRNGHIIVV DNKSCCVFTF QPNGKLVGRF GGRGATDRHF ENSP00000433102/1-744 GRLMGPKGVA VDRNGHIIVV DNKSCCVFTF QPNGKLVGRF GGRGATDRHF ENSBTAP00000004636/1-744 GRLMGPKGVA VDRNGHIIVV DNKSCCVFTF QPNGKLVGRF GGRGATDRHF BACU004493/1-711 GRLMGPKGVA VDRNGHIIVV DNKSCCVFTF QPNGKLVGRF GGRGATDRHF bmy_13091T0/1-787 GRLMGPKGVA VDRNGHIIVV DNKSCCVFTF QPNGKLVGRF GGRGATDRHF 701 750 ENSTTRP00000012183/1-743 AGPHFVAVNN KNEIVVTDFH NHSVKVYSAD GEFLFKFGSH GEGNGQFNAP ENSP00000433102/1-744 AGPHFVAVNN KNEIVVTDFH NHSVKVYSAD GEFLFKFGSH GEGNGQFNAP ENSBTAP00000004636/1-744 AGPHFVAVNN KNEIVVTDFH NHSVKVYSAD GEFLFKFGSH GEGNGQFNAP BACU004493/1-711 AGPHFVAVNN KNEIVVTDFH NHSVKVYSAD GEFLFKFGSH GEGNGQFNAP bmy_13091T0/1-787 AGPHFVAVNN KNEIVVTDFH NHSVKVYSAD GEFLFKFGSH GEGNGQFNAP 751 800 ENSTTRP00000012183/1-743 TGVAVDSNGN IIVADWGNSR IQVFDSSGSF LSYINTSAEP LYGPQGLALT ENSP00000433102/1-744 TGVAVDSNGN IIVADWGNSR IQVFDSSGSF LSYINTSAEP LYGPQGLALT ENSBTAP00000004636/1-744 TGVAVDSNGN IIVADWGNSR IQVFDSSGSF LSYINTSAEP LYGPQGLALT BACU004493/1-711 TGVAVDSNGN IIVADWGNSR IQVFDSSGSF LSYINTSAEP LYGPQGLALT bmy_13091T0/1-787 TGVAVDSNGN IIVADWGNSR IQVFDSSGSF LSYINTSAEP LYGPQGLALT 801 850 ENSTTRP00000012183/1-743 SDGHVVVADA GNHCFKAYRY LQ ENSP00000433102/1-744 SDGHVVVADA GNHCFKAYRY LQ ENSBTAP00000004636/1-744 SDGHVVVADA GNHCFKAYRY LQ BACU004493/1-711 SDGHVVVADA GNHCFKAYRY LQ bmy_13091T0/1-787 SDGHVVVADA GNHCFKAYRY LQ