KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:28 2014 Check: 00 .. Name: bmy_14560T0/1-460 Len: 531 Check: 3848 Weight: 1.00 Name: ENSP00000306117/1-478 Len: 531 Check: 7652 Weight: 1.00 Name: BACU018183/1-531 Len: 531 Check: 8103 Weight: 1.00 Name: ENSTTRP00000005486/1-478 Len: 531 Check: 6859 Weight: 1.00 Name: ENSBTAP00000004645/1-478 Len: 531 Check: 6669 Weight: 1.00 // 1 50 bmy_14560T0/1-460 ---------- -----MLGPA WRRADGDVSR RAGTDVTFAH RRFRSARPSS ENSP00000306117/1-478 ---------- ---------- ---------- ---------- ---------- BACU018183/1-531 MVTSRAGREL TSPSRIAASG PRECGSCAGR ELRAGVAVRA VVFFGSRPSS ENSTTRP00000005486/1-478 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004645/1-478 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_14560T0/1-460 SGTMATDSWA LAVDEQEAAV KSMSNLQIKE EKVKPDTNGV IKTDATPEKT ENSP00000306117/1-478 ---MATDSWA LAVDEQEAAV KSMTNLQIKE EKVKADTNGI IKTSTTAEKT BACU018183/1-531 SGTMATDSWA LAVDEQEAAV KSMSNLQIKE EKVKPDTNGV IKTDVTPEKT ENSTTRP00000005486/1-478 ---MATDSWA LAVDKQEAAV KSMSNLQIKE EKVKPDTNGV IKTNATPEKT ENSBTAP00000004645/1-478 ---MATDSWA LAVDEQEAAV KSMSNLQIKE EKVKPDTNGV IKTNATPEKT 101 150 bmy_14560T0/1-460 DEEEKELSIK YWLTGDF--- ---------- ---------- ---------- ENSP00000306117/1-478 DEEEKEDRAA QSLLNKLIRS NLVDNTNQVE VLQRDPNSPL YSVKSFEELR BACU018183/1-531 EEEEKEDRAA QSLLNKLIRS NLVDNTNQVE VLQRDPNSPL YSVKSFEELR ENSTTRP00000005486/1-478 DEEEKEDRAA QSLLNKLIRS NLVDNTNQVE VLQRDPNSPL YSVKSFEELR ENSBTAP00000004645/1-478 DEEEKEDRAA QSLLNKLIRS NLVDNTNQVE VLQRDPNSPL YSVKSFEELR 151 200 bmy_14560T0/1-460 ----WMSGTF LIS------- ---------- --PQNLIAQS QSGTGKTAAF ENSP00000306117/1-478 LKPQLLQGVY AMGFNRPSKI QENALPMMLA EPPQNLIAQS QSGTGKTAAF BACU018183/1-531 LKPQLLQGVY AMGFNRPSKI QENALPMMLA EPPQNLIAQS QSGTGKTAAF ENSTTRP00000005486/1-478 LKPQLLQGVY AMGFNRPSKI QENALPMMLA EPPQNLIAQS QSGTGKTAAF ENSBTAP00000004645/1-478 LKPQLLQGVY AMGFNRPSKI QENALPMMLA EPPQNLIAQS QSGTGKTAAF 201 250 bmy_14560T0/1-460 VLAMLSRVEP AERYPQCLCL SPTYELALQT GKVIEQMGRF HPELKLAYAV ENSP00000306117/1-478 VLAMLSRVEP SDRYPQCLCL SPTYELALQT GKVIEQMGKF YPELKLAYAV BACU018183/1-531 VLAMLSRVEP AERYPQCLCL SPTYELALQT GKVIEQMGRF HPELKLAYAV ENSTTRP00000005486/1-478 VLAMLSRVEP AERYPQCLCL SPTYELALQT GKVIEQMGRF HPELKLAYAV ENSBTAP00000004645/1-478 VLAMLSRVEP AERYPQCLCL SPTYELALQT GKVIEQMGKF HPELKLAYAV 251 300 bmy_14560T0/1-460 RGNKLERGQK ISEHIVIGTP GTVLDWCSKL KFIDPKKIKV FVLDEADVMI ENSP00000306117/1-478 RGNKLERGQK ISEQIVIGTP GTVLDWCSKL KFIDPKKIKV FVLDEADVMI BACU018183/1-531 RGNKLERGQK ISEHIVIGTP GTVLDWCSKL KFIDPKKIKV FVLDEADVMI ENSTTRP00000005486/1-478 RGNKLERGQK ISEHIVIGTP GTVLDWCSKL KFIDPKKIKV FVLDEADVMI ENSBTAP00000004645/1-478 RGNKLERGQK ISEHIVIGTP GTVLDWCSKL KFIDPKKIKV FVLDEADVMI 301 350 bmy_14560T0/1-460 ATQGHQDQSV RIQRMLPRNC QMLLFSATFE DSVWKFAQKV VPDPNIIKLK ENSP00000306117/1-478 ATQGHQDQSI RIQRMLPRNC QMLLFSATFE DSVWKFAQKV VPDPNVIKLK BACU018183/1-531 ATQGHQDQSV RIQRMLPRNC QMLLFSATFE DSVWKFAQKV VPDPNIIKLK ENSTTRP00000005486/1-478 ATQGHQDQSI RIQRMLPRNC QMLLFSATFE DSVWKFAQKV VPDPNIIKLK ENSBTAP00000004645/1-478 ATQGHQDQSI RIQRMLPRNC QMLLFSATFE DSVWKFAQKV VPDPNIIKLK 351 400 bmy_14560T0/1-460 REEETLDTIK QYYVLCNSRD EKFQALCNIY GAITIAQAMI FCHTRKTASW ENSP00000306117/1-478 REEETLDTIK QYYVLCSSRD EKFQALCNLY GAITIAQAMI FCHTRKTASW BACU018183/1-531 REEETLDTIK QYYVLCSSRD EKFQALCNIY GAITIAQAMI FCHTRKTASW ENSTTRP00000005486/1-478 REEETLDTIK QYYVLCNSRD EKFQALCNIY GAITIAQAMI FCHTRKTASW ENSBTAP00000004645/1-478 REEETLDTIK QYYVLCNSRD EKFQALCNIY GAITIAQAMI FCHTRKTASW 401 450 bmy_14560T0/1-460 LAAELSKEGH QVALLSGEMV VEQRAAVIER FREGKEKVLV TTNVCARGID ENSP00000306117/1-478 LAAELSKEGH QVALLSGEMM VEQRAAVIER FREGKEKVLV TTNVCARGID BACU018183/1-531 LAAELSKEGH QVALLSGEMV VEQRAAVIER FREGKEKVLV TTNVCARGID ENSTTRP00000005486/1-478 LAAELSKEGH QVALLSGEMV VEQRAAVIER FREGKEKVLV TTNVCARGID ENSBTAP00000004645/1-478 LAAELSKEGH QVALLSGEMV VEQRAAVIER FREGKEKVLV TTNVCARGID 451 500 bmy_14560T0/1-460 VEQVSVVINF DLPVDKDGNP DNETYLHRIG RTGRFGKRGL AVNMVDSKHS ENSP00000306117/1-478 VEQVSVVINF DLPVDKDGNP DNETYLHRIG RTGRFGKRGL AVNMVDSKHS BACU018183/1-531 VEQVSVVINF DLPVDKDGNP DNETYLHRIG RTGRFGKRGL AVNMVDSKHS ENSTTRP00000005486/1-478 VEQVSVVINF DLPVDKDGNP DNETYLHRIG RTGRFGKRGL AVNMVDSKHS ENSBTAP00000004645/1-478 VEQVSVVINF DLPVDKDGNP DNETYLHRIG RTGRFGKRGL AVNMVDSKHS 501 550 bmy_14560T0/1-460 MNILNRIQEH FNKKIERLDT DDLDEIEKIA N ENSP00000306117/1-478 MNILNRIQEH FNKKIERLDT DDLDEIEKIA N BACU018183/1-531 MNILNRIQEH FNKKIERLDT DDLDEIEKIA N ENSTTRP00000005486/1-478 MNILNRIQEH FNKKIERLDT DDLDEIEKIA N ENSBTAP00000004645/1-478 MNILNRIQEH FNKKIERLDT DDLDEIEKIA N