KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:24:29 2014  Check: 00 ..

 Name: ENSP00000359170/1-203     Len:    203  Check:  8695  Weight:  1.00
 Name: ENSBTAP00000004655/1-203  Len:    203  Check:  1594  Weight:  1.00
 Name: ENSTTRP00000014148/1-181  Len:    203  Check:  7523  Weight:  1.00
 Name: BACU020265/1-181          Len:    203  Check:  6913  Weight:  1.00
 Name: bmy_12652T0/1-180         Len:    203  Check:  7486  Weight:  1.00

//


                          1                                                   50
ENSP00000359170/1-203     MAVTGWLESL RTAQKTALLQ DGRRKVHYLF PDGKEMAEEY DEKTSELLVR 
ENSBTAP00000004655/1-203  MAVTGWLESL RAAEKTALLQ DGRRKVHYLF PNGKEMAEEY DEKTNELLVR 
ENSTTRP00000014148/1-181  ---------- ---------- --RRKVHYLF PDGKEMAEEY DEKTSELLVR 
BACU020265/1-181          ---------- ---------- --RRKVHYLF PDGKEMAEEY DEKTSELLVR 
bmy_12652T0/1-180         MAVTGWLESL RAAEKTALLQ DGRRKVHYLF PDGKEMAEEY DEKTSELLVR 


                          51                                                 100
ENSP00000359170/1-203     KWRVKSALGA MGQWQLEVGD PAPLGAGNLG PELIKESNAN PIFMRKDTKM 
ENSBTAP00000004655/1-203  KWRVKSALGA LGQWQIEVGE PALPGAGSLG PELITESNAN PIFVRKDTKM 
ENSTTRP00000014148/1-181  KWRVKSALGA LGQWQIEVGE PALPGAGSLG PELITESNSN PIFMRKDTKM 
BACU020265/1-181          KWRVKSALGA LGQWQIEVGE PALPAAGSLG PELITESNSN PIFMRKDTKM 
bmy_12652T0/1-180         KWRVKSALGA LGQWQIE--- ---------- ---------- PIFMRKDTKM 


                          101                                                150
ENSP00000359170/1-203     SFQWRIRNLP YPKDVYSVSV DQKERCIIVR TTNKKYYKKF SIPDLDRHQL 
ENSBTAP00000004655/1-203  SFQWRIRNLP YPKDVYNVFV DQKERCVVVR TTNKKYYKKF SIPDLERYQL 
ENSTTRP00000014148/1-181  SFQWRIRNLP YPKDVYSVCV DQKERCVVVR TTNKKYYKKF SIPDLDRYQL 
BACU020265/1-181          SFQWRIRNLP YPKDVYSVCV DQKERCVVVR TTNKKYYKKF AIPDLDRYQL 
bmy_12652T0/1-180         SFQWRIRNLP YPKDVYSVCV DQKERCVVVR TTNKKYYKKF AIPDLDRYQL 


                          151                                                200
ENSP00000359170/1-203     PLDDALLSFA HANCTLIISY QKPKEVVVAE SELQKELKKV KTAHSNDGDC 
ENSBTAP00000004655/1-203  PLDESLLSFA HANSTLIISY QKPKEVLVAE SELQKELKKV KTAHSSDGDC 
ENSTTRP00000014148/1-181  PLDDSSLSFA HANCTLIISY QKPKEVLVAE SNLQKELKKV QTAHSSDGDC 
BACU020265/1-181          PLDDSLLSSA HANCTLVISY QKPKEVLVAE SELQKELKKV KTAHSSDGDC 
bmy_12652T0/1-180         PLDDSSLSSA HANCTLVISY QKPKEVLVAE SELQKELKKV KTAHSSDGDC 


                          201                                                250
ENSP00000359170/1-203     KTQ 
ENSBTAP00000004655/1-203  KTQ 
ENSTTRP00000014148/1-181  KTQ 
BACU020265/1-181          KTQ 
bmy_12652T0/1-180         KTQ