KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:31 2014 Check: 00 .. Name: ENSP00000444196/1-377 Len: 381 Check: 5111 Weight: 1.00 Name: ENSBTAP00000004671/1-377 Len: 381 Check: 8799 Weight: 1.00 Name: BACU013472/1-322 Len: 381 Check: 203 Weight: 1.00 Name: bmy_04238T0/1-309 Len: 381 Check: 9771 Weight: 1.00 Name: ENSTTRP00000000914/1-311 Len: 381 Check: 7811 Weight: 1.00 // 1 50 ENSP00000444196/1-377 MAVALPRDLR QDANLAKRRH AELCRQKRVF NARNRIIGGD TEAWDVQVHD ENSBTAP00000004671/1-377 MEVAQPKDLK EDFVLAKRRH AELVRQKRIF NARNRIIGGD TTAWDAQVCD BACU013472/1-322 MEVAQPKDLE EDFGLAKRRY AELRRQKRIF NARNRIIGGD TEAWDVQVCD bmy_04238T0/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000914/1-311 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000444196/1-377 QKIKEATEKA RHETLAAEMR QNDKIMCILE NRKKRDRKNL CRAINDFQQS ENSBTAP00000004671/1-377 QNIKAATEKA RDEAFAAEMR QNDKIACLSE NRERRDRKNL CKAINDFQQS BACU013472/1-322 QKIKEATEKA RQETFAAEMR QNDKITCISE NRERRDRKNL CKAINDFQQS bmy_04238T0/1-309 ---------- --------MR QNDKIACISE DRERRDRKNL CKAINDFQQS ENSTTRP00000000914/1-311 ---------- --------MR QNDKIACISE DRERRDRKNL CKAISDFQQS 101 150 ENSP00000444196/1-377 FQKPETRREF DLSDPLALKK DLPARQSDND VRNTISGMQK FMGEDLNFHE ENSBTAP00000004671/1-377 FQRPETRREF DLSDPLALKK DRPARQSDYD ARNTISGMQK FMGEDLNFHL BACU013472/1-322 FQKPETRREF DLSDPLALKK DLPARQSDND ARNTISGMQK FMGEDLNFYQ bmy_04238T0/1-309 FQKPETRREF DLSDPLALKK DLPARQSDND ARNTTSGMQK FMGEDLSFYQ ENSTTRP00000000914/1-311 FQKPETRREF DLSDPLALKK DLPARQSDND ARNTVSGMQK FMGEDLNFYQ 151 200 ENSP00000444196/1-377 RKKFQEEQNR EWSLQQQREW KNARAEQKCA EALYTETRLQ FDETAKHLQK ENSBTAP00000004671/1-377 RKKFQEEQNR EWSLQQQKEQ MIGRENQKCA EDLYLKTRLQ FDETAKHLQN BACU013472/1-322 RKKFQEEQNR EWSLQQQREW KIARANQKCA EDLYLKTRLQ FDETAKHLQN bmy_04238T0/1-309 RKKFQEEQNR EWSLQQQREW KIARANQKCA EDLYLKTRLQ FDETAKHLQN ENSTTRP00000000914/1-311 RKKFQEEQNR EWSLQQQREW KMARANQKCA EELYLKTRLQ FDETAK-LQN 201 250 ENSP00000444196/1-377 ----LESTTR KAVCASVKDF NKSQAIESVE RKKQEKKQEQ EDNLAEITNL ENSBTAP00000004671/1-377 ----LETATR KAVCATVKEF NKNQALESAE KKIQERKQEQ EDNLAEISNM BACU013472/1-322 ----LESTTR KAVCAAVKEF NKKQALESAE KKIQAKKQDQ EDNLAEISHL bmy_04238T0/1-309 ----LESTTR KAVCAAVKEF NKKQALESAE KKIQEKKQDQ EDNLAEISHL ENSTTRP00000000914/1-311 RKAXLESTTR RAVCTAVKEF NKNQALESAE KKIQQKKQDQ EDNLAEISNL 251 300 ENSP00000444196/1-377 LRGDLLSENP QQAASSFGPH RVVPDRWKGM TQEQLEQIRL VQKQQIQEKL ENSBTAP00000004671/1-377 LRGDLLSENP QQAASSFGPH RVVPDRWKGM SQEQLEEIRL VQRQQVQEKL BACU013472/1-322 LRGDLLSENP QQAASSFGPH RVVPDRWKGM SREQLEFIRL VQEQQVQEKL bmy_04238T0/1-309 LRGDLLSENP QQAASSFGPH RVVPDRWKGV SREQLGLIRL GQKQQVQEKL ENSTTRP00000000914/1-311 LRGDLLSENP QQAASSFGPH RVVPNRWKGM SREQLEHIRL VQKQQVQEKL 301 350 ENSP00000444196/1-377 RLQEEKRQRD LDWDRRRIQG ARATLLFERQ QWRRQRDLRR ALDSSNLSLA ENSBTAP00000004671/1-377 RLQEEERQRD MDWDRRRIQK ARATLLFEQQ QQRLQRGLRR ALDCSNLSLA BACU013472/1-322 ---------- ---------- ---------- ---------- ------VPVP bmy_04238T0/1-309 RLQEEERQRD MHWDRQRVQR ARAALLCDRQ QQCQQHDLRR ALDCSNLSLA ENSTTRP00000000914/1-311 RLQEEERQRD MDWDRQRVQR ARTALLLERQ QQRQRRGLRR ALDC-NLSLA 351 400 ENSP00000444196/1-377 KEQHLQKKYM NEVYTNQPTG DYFTQFNTGS R ENSBTAP00000004671/1-377 REQLLQKKHM KELCTNHATE DYFTQFNTGS R BACU013472/1-322 PTPPPPEPSD GALCSLPPSS SI-------- - bmy_04238T0/1-309 KEQLSQKKYM KEICTNHPTE DYFAQFNTRS R ENSTTRP00000000914/1-311 KEQLLQKKYM KEICTNHLTE AYFAQFNTRS R