KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:32 2014 Check: 00 .. Name: ENSTTRP00000014412/1-1027 Len: 1132 Check: 2753 Weight: 1.00 Name: ENSBTAP00000004672/1-1014 Len: 1132 Check: 891 Weight: 1.00 Name: ENSP00000407822/1-1028 Len: 1132 Check: 1386 Weight: 1.00 Name: bmy_12792T0/1-1058 Len: 1132 Check: 1502 Weight: 1.00 Name: BACU015131/1-1089 Len: 1132 Check: 8816 Weight: 1.00 // 1 50 ENSTTRP00000014412/1-1027 ---------- ---------- --MRLLWKLV --------IL LTLINTYAGD ENSBTAP00000004672/1-1014 ---------- ---------- ---------- ---------- --------GD ENSP00000407822/1-1028 ---------- ---------- --MRLLWKLV --------IL LPLINSSAGD bmy_12792T0/1-1058 MGEILTSANG NEVALEIGNS ADTHKCLCRR GAPLGIKALI LFLASKRTGD BACU015131/1-1089 ---------- ---------- -----MWCNS --------FL FP------GD 51 100 ENSTTRP00000014412/1-1027 GRLSHPIFTQ EPQDVIFPLD LSKSEIILNC AANGYPSPHY RWKQNGTDID ENSBTAP00000004672/1-1014 GGLSPPIFTQ EPQDAIFPLD LSKSEIILNC AANGYPLPHY RWKHNGADID ENSP00000407822/1-1028 GLLSRPIFTQ EPHDVIFPLD LSKSEVILNC AANGYPSPHY RWKQNGTDID bmy_12792T0/1-1058 GRLSRPIFTQ EPQDVIFPLD LSKSEIILDC AANGYPSPHY RWKQNGTDID BACU015131/1-1089 GHLSRPIFTQ EPQDVIFPLD LSKSEIILNC AANGYPSPHY RWKQNGTDID 101 150 ENSTTRP00000014412/1-1027 FTMSYHYRLD GGSLAISSPR TDQDTGTYQC LATNLLGTIL SQKAKLQFAY ENSBTAP00000004672/1-1014 FSMSYHYRLD GGSLAISSPR TDQDIGTYQC LATNSLGTIL SQKAKLQFAY ENSP00000407822/1-1028 FTMSYHYRLD GGSLAINSPH TDQDIGMYQC LATNLLGTIL SRKAKLQFAY bmy_12792T0/1-1058 FTMSYHYRLD GGSLAISSPR TDQDIGTYQC LATNPLGTIL SQKAKLQFAY BACU015131/1-1089 FTMSYHYRLD GGSLAISSPR TDQDIGTYQC LATNPLGTIL SQKAKLQFAL 151 200 ENSTTRP00000014412/1-1027 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004672/1-1014 ---------- ---------- ---------- ---------- ---------- ENSP00000407822/1-1028 ---------- ---------- ---------- ---------- ---------- bmy_12792T0/1-1058 ---------- ---------- ---------- ---------- ---------- BACU015131/1-1089 NCSKKLKTVP QGDISPLEKA CLSTKDKLLK RQHCLDLSSF RCFILPMNRS 201 250 ENSTTRP00000014412/1-1027 ---------- ---------- IEDFETKTRS TVSVREGQGV VLLCGPPPHF ENSBTAP00000004672/1-1014 ---------- ---------- IEDFETKTRS TVSVREGQGV VLLCGPPPHF ENSP00000407822/1-1028 ---------- ---------- IEDFETKTRS TVSVREGQGV VLLCGPPPHF bmy_12792T0/1-1058 ---------- ---------- IEDFETKTRS TVSVREGQGV VLLCGPPPHF BACU015131/1-1089 DTKVSKAAIK TKRSIETGEN IEDFETKIRS TVSVREGQGV VLLCGPPPHF 251 300 ENSTTRP00000014412/1-1027 G-LSYAWTFN DNPLYVQEDN RRFVSQETGN LYIAKVEPSD VGNYTCYITN ENSBTAP00000004672/1-1014 GAPCYAPFFN IRKVIFQYHN LRQIMQIVYN IYILYISPCP TGNYTCFITN ENSP00000407822/1-1028 GDLSYAWTFN DNPLYVQEDN RRFVSQETGN LYIAKVEPSD VGNYTCFITN bmy_12792T0/1-1058 GGLSYAWTFN DNPLYVQEDN RRFVSQETGN LYIAKVEPSD VGNYTCYITN BACU015131/1-1089 GGLSYAWTFN DNPLYVQEDN RRFVSQETGN LYIAKVEPSD VGNYTCYITN 301 350 ENSTTRP00000014412/1-1027 KEAQRSVQGP PTPLVQRTDG VMGEYEPKIE VHFPETIQAA KDSSIKLECF ENSBTAP00000004672/1-1014 KEAQRSVQGP PTPLVQRTDG VMGEYEPKIE VRFPETIQAA KDSSVKLECF ENSP00000407822/1-1028 KEAQRSVQGP PTPLVQRTDG VMGEYEPKIE VRFPETIQAA KDSSVKLECF bmy_12792T0/1-1058 KEAQRSVQGP PTPLVQRTDG VMGEYEPKIE VHFPETIQAA KDSSIKLECF BACU015131/1-1089 KEAQRSVQGP PTPLVQRTDG VMGEYEPKIE VHFPETIQAA KDSSIKLECF 351 400 ENSTTRP00000014412/1-1027 ALGNPVPDIS WRRLDGNPLP GKVKYSKSQA ILEIPNFQQE DEGVYECIAS ENSBTAP00000004672/1-1014 ALGNPIPDIS WRRLDGSPLP GKVKYSKSQA ILEIPNFQQE DEGFYECIAS ENSP00000407822/1-1028 ALGNPVPDIS WRRLDGSPLP GKVKYSKSQA ILEIPNFQQE DEGFYECIAS bmy_12792T0/1-1058 ALGNPVPDIS WRRLDGSPLP GKVKYSKSQA ILEIPNFQQE DEGVYECIAS BACU015131/1-1089 ALGNPVPDIS WRRLDGSPLP GKVKYSKSQA ILEIPNFQQE DEGVYECIAS 401 450 ENSTTRP00000014412/1-1027 NLRGRNLAKG QLIFY--APP EWEQKIQNTY LSIYDSLFWE CKASGKPNPW ENSBTAP00000004672/1-1014 NLRGRNLAKG QLIFYETAPP EWEQKIQDTY LSIYDSLFWE CKASGKPDPW ENSP00000407822/1-1028 NLRGRNLAKG QLIFY--APP EWEQKIQNTH LSIYDNLLWE CKASGKPNPW bmy_12792T0/1-1058 NLRGRNLAKG QLIFY--APP EWEQKIQNTY LSIYDSLFWE CKASGKPNPW BACU015131/1-1089 NLRGRNLAKG QLIFY--APP EWEQKIQNTY LSIYDSLFWE CKASGKPNPW 451 500 ENSTTRP00000014412/1-1027 YTWLKNCERL NPEERIQIEN GTLIITMLNV SDSGIYQCAA ENKYQIIYAN ENSBTAP00000004672/1-1014 YTWLKNGERL NLDERIQIEN GTLIITMLNV SDSGIYQCAA ENKYQIIYAN ENSP00000407822/1-1028 YTWLKNGERL NPEERIQIEN GTLIITMLNV SDSGVYQCAA ENKYQIIYAN bmy_12792T0/1-1058 YXWLKNGERL NPEERIQIEN GTLIITMLNV SDSGIYQCAA ENKYQIIYAN BACU015131/1-1089 YTWLKNGERL NPEERIQIEN GTLIITMLNV SDSGIYQCAA ENKYQIIYAN 501 550 ENSTTRP00000014412/1-1027 AELRVLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000004672/1-1014 AELRVLASAP DFSKNPLKKY SVVQVGGDIV IECKPNAFPR ATISWKRGIE ENSP00000407822/1-1028 AELRVLASAP DFSKSPVKKK SFVQVGGDIV IGCKPNAFPR AAISWKRGTE bmy_12792T0/1-1058 AELRVLASAP DFSKNPIKKN SVVQVGGDIV IECKPNAFPR AAISWKRGME BACU015131/1-1089 AELRVLASAP DFSKNPIKKN SVVQVGGDIV IECKPNAFPR AAISWKRGME 551 600 ENSTTRP00000014412/1-1027 XXXXXXXVFI LKDGSLKIHN VTRLDAGSYT CIATNQFGVA KNTGSLVVKE ENSBTAP00000004672/1-1014 SLRQSKRVFL LEDGSLKIYN VTRSDAGLYT CIATNQFGVA KNTGSLIIKE ENSP00000407822/1-1028 TLRQSKRIFL LEDGSLKIYN ITRSDAGSYT CIATNQFGTA KNTGSLIVKE bmy_12792T0/1-1058 SLRQSKRVFI LKDGSLKIHN VTRSDAGSYT CIATNQFGVA KNTGSLVVKE BACU015131/1-1089 SLRQSKRVFI LKDGSLKIHN VTRSDAGSYT CIATNQFGVA KNTGSLVVKE 601 650 ENSTTRP00000014412/1-1027 RTVITVPPSK MDVTVGESIV LPCQVSHDSS IEVVFLWSFN GDVIDLKKGV ENSBTAP00000004672/1-1014 RTVITVPPST MDVTVGESIV LPCQVSRDPS VDVVFVWSFN GDVIDFKKGM ENSP00000407822/1-1028 RTVITVPPSK MDVTVGESIV LPCQVSHDPS IEVVFVWFFN GDVIDLKKGV bmy_12792T0/1-1058 RTVITVPPSK MDVTVGESIV LPCQVSHDPS IEVVFVWSFN GDVIDLKKGV BACU015131/1-1089 RTVITVPPSK MDVTVGESIV LPCQVSHDTS IEVVFVWSFN GDVIDLKKEV 651 700 ENSTTRP00000014412/1-1027 AHFERIGGES VGDLMIRNIQ LNHSGKYLCT VKTTLESLSA EADIIVRGPP ENSBTAP00000004672/1-1014 AHFERIGGES VGDLMIRNIQ LNHSGKYLCT VKTTLESLSA DGDIIVRGPP ENSP00000407822/1-1028 AHFERIGGES VGDLMIRNIQ LHHSGKYLCT VQTTLESLSA VADIIVRGPP bmy_12792T0/1-1058 AHFERIGGES VGDLMIRNIQ LNHSGKYLCT VKTTLESLSA EADIIVRGPP BACU015131/1-1089 AHFERIGGES VGDLMIRNIQ LNHSGKYLCT VKTTLESLSD EADIIVRGPP 701 750 ENSTTRP00000014412/1-1027 GPPEDVRVEH ISSTTSQLSW RPGSDNNSPI QIFSIQARTP FSVGWQAVST ENSBTAP00000004672/1-1014 GPPEDVRVKH ISSTTCQLSW RPGSDNNSPI QIFSIQARTP FSVGWQAVST ENSP00000407822/1-1028 GPPEDVQVED ISSTTSQLSW RAGPDNNSPI QIFTIQTRTP FSVGWQAVAT bmy_12792T0/1-1058 GPPEDVRVEX ISSTTSQLSW RPGSDNNSPI QIFSIQARTP FSVGWQAVST BACU015131/1-1089 GPPEDVRVEH ISSTTSQLSW RPGSDNNSPI QIFSIQARTP FSVGWQAVST 751 800 ENSTTRP00000014412/1-1027 VPEILNGKTY NATVVGLSPW VEYEFRVVAG NSIGIGEPSK PSEVLRTKAS ENSBTAP00000004672/1-1014 VPEILNGKTF NATVVGLNPW VEYEFRVVAG NSIGIGEPSK PSELLRTKSS ENSP00000407822/1-1028 VPEILNGKTY NATVVGLSPW VEYEFRVVAG NSIGIGEPSE PSELLRTKAS bmy_12792T0/1-1058 VPEILNGKTY NATVVGLSPW VEYEFRVVAG NSIGIGEPSK PSEVLRTKAS BACU015131/1-1089 VPEILNGKTY NATVVGLSPW VEYEFRVVAG NSIGIGEPSK PSEVLRTKAS 801 850 ENSTTRP00000014412/1-1027 VPVMAPTNIN GGGGSRSELV ITWESIPEEL QNGEEFGYII MLRPVGSTTW ENSBTAP00000004672/1-1014 VPAVAPTNIN GGGGSRSELI ITWESIPEEL QNGEDFGYIV MLRPVGSTTW ENSP00000407822/1-1028 VPVVAPVNIH GGGGSRSELV ITWESIPEEL QNGEGFGYII MFRPVGSTTW bmy_12792T0/1-1058 VPVVAPTNIN GGGGSRSELV ITWESIPEEL QNGEEFGYII MLRPVGSTTW BACU015131/1-1089 VPVVAPTNIN GGGGSRSELV ITWESIPEEL QNGEEFGYII MLRPVGSTTW 851 900 ENSTTRP00000014412/1-1027 TKERVPFVES SRFVYRNESI TPLSPFEVKV GVYNKKGEGA LSTTSIVYSG ENSBTAP00000004672/1-1014 TKERVPSVES SRFIYRNENI IPLSPFEIKV GVYNKEGEGP LSTASIIYSG ENSP00000407822/1-1028 SKEKVSSVES SRFVYRNESI IPLSPFEVKV GVYNNEGEGS LSTVTIVYSG bmy_12792T0/1-1058 TKERVPFVES SRFVYRNESI TPLSPFEVKV GVYNKKGEGA LSTTSIVYSG BACU015131/1-1089 TKERVPFVES SRFVYRNESI TPLSPFEVKV GVYNKKGEGA LSTTSIVYSG 901 950 ENSTTRP00000014412/1-1027 EDEPQLAPRG TSVQSFSASE MEVSWNAIAW NRNTGRVLGY EVLYWTDDSK ENSBTAP00000004672/1-1014 EDEPQLAPRG TSVQSFSASE MEVSWNAIAW NRNTGRVLGY EVLYWTDDSK ENSP00000407822/1-1028 EDEPQLAPRG TSLQSFSASE MEVSWNAIAW NRNTGRVLGY EVLYWTDDSK bmy_12792T0/1-1058 EDEPQLAPRG TSVQSFSASE MEVSWNAIAW NRNTGRVLGY EVLYWTDDSK BACU015131/1-1089 EDEPQLAPRG TSVQSFSASE MEVSWNAIAW NRNTGRVLGY EVLYWTDDSK 951 1000 ENSTTRP00000014412/1-1027 ESVIGKIRVS GNVTTKNITG LKANTVYFAS VRAYNTAGTG PSSPPANGTT ENSBTAP00000004672/1-1014 ESMIGKIRVS GNITTKNITG LKANTVYFAS VRAYNTAGTG PSSPPVNVTT ENSP00000407822/1-1028 ESMIGKIRVS GNVTTKNITG LKANTIYFAS VRAYNTAGTG PSSPPVNVTT bmy_12792T0/1-1058 ESVIGKIRVS GNVTTKNITG LKANTVYFAS VRAYNTAGTG PSSPPVNGTT BACU015131/1-1089 ESVIGKIRVS GNVTTKNITG LKANTVYFAS VRAYNTAGTG PSSPPVNGTT 1001 1050 ENSTTRP00000014412/1-1027 KKSPPSQPPA NIAWKLTNSK LCLNWEHVKT MENESEVLGY KILYRQNRQS ENSBTAP00000004672/1-1014 KKSPPSQPPA NIAWKLTNSK LCLNWEHVKT MENESEVLGY KILYRQNRQS ENSP00000407822/1-1028 KKSPPSQPPA NIAWKLTNSK LCLNWEHVKT MENESEVLGY KILYRQNRQS bmy_12792T0/1-1058 KKSPPSQPPA NIAWKLTNSK LCLNWEHVKT MENESEVLGY KILYRQNRQS BACU015131/1-1089 KKSPPSQPPA NIAWKLTNSK LCLNWEHVKT MENESEVLGY KILYRQNRQS 1051 1100 ENSTTRP00000014412/1-1027 KTHILETNNT SAELLVPFEE DYLIEIRTVS DGGDGSSSEE IRIPKMSXXX ENSBTAP00000004672/1-1014 KTHILETNNT SAELLVPFEE DYLIEIRTVS DGGDGSSSEE IRIPKMSSLS ENSP00000407822/1-1028 KTHILETNNT SAELLVPFEE DYLIEIRTVS DGGDGSSSEE IRIPKMSSLS bmy_12792T0/1-1058 KTHILETNNT SAELLVPFEE DYLIEIRTVS DGGDGSSSEE IRIPKMSSLS BACU015131/1-1089 KTHILETNNT SAELLVPFEE DYLIEIRTVS DGGDGSSSEE IRIPKMSSLS 1101 1150 ENSTTRP00000014412/1-1027 XXXXXXXXXX XXXXXXXXXX XXCLAIQPPI -- ENSBTAP00000004672/1-1014 SRGISVLEPS IHFLSVVITI FVVLLFSHLY DE ENSP00000407822/1-1028 SRGIQFLEPS THFLSIVIVI FHCFAIQPLI -- bmy_12792T0/1-1058 SRGVSVLEPS IHFLSXVIMI FYCFAIQPLI -- BACU015131/1-1089 SRGVSVLEPS IHFLSIVIMI FYCFAIQPLI --