KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:33 2014 Check: 00 .. Name: ENSP00000445786/1-139 Len: 183 Check: 8279 Weight: 1.00 Name: ENSBTAP00000004673/1-145 Len: 183 Check: 8385 Weight: 1.00 Name: ENSTTRP00000001340/1-139 Len: 183 Check: 4301 Weight: 1.00 Name: bmy_21396T0/1-147 Len: 183 Check: 1548 Weight: 1.00 Name: BACU018484/1-147 Len: 183 Check: 8162 Weight: 1.00 // 1 50 ENSP00000445786/1-139 --MGQNWKRQ QKLWNVPQLP FIRVPPSIYD TSLLK----- --------AL ENSBTAP00000004673/1-145 --MGEKWKRQ QKLCNVPHIP RIRVPRSASD TPLLK----- --------DL ENSTTRP00000001340/1-139 --MGGKQKRQ QKLWNVPQIP CIRVPHSVSD TSLLK----- --------DL bmy_21396T0/1-147 MKMGGKQKRQ QKLRNVPQIP CIRVPHSVSD SSLLKVQAYY SQMEGPSLSL BACU018484/1-147 MKVGGKQKRQ QKLRNVPQIP CIRVPHSVSD TSLLK----- --------DL 51 100 ENSP00000445786/1-139 NQ-------- ---------- -----GQQRY FYSIMRIYNS RPQWEALQTR ENSBTAP00000004673/1-145 TQ-------- ---------- -----GQQRY FYSIMRIYSP RPQWEALQAR ENSTTRP00000001340/1-139 TQ-------- ---------- -----GQQRY FYSSMRIYNP RAQWVALQTC bmy_21396T0/1-147 LQGLRVSWLF VYPALGKTLG PTEALGQQRY FYSIMRIYNP RAQWVALQTC BACU018484/1-147 TQ-------- ---------- -----GQQRY FYSIMRIYNP RAQLVALQTC 101 150 ENSP00000445786/1-139 YIHSLQHQQL LGYITQREAL SYALVLRDST KRASAKVAPQ RTIPRKTSAM ENSBTAP00000004673/1-145 YLHSLQHQQL LGYITQREAS ACAAVLRDST KRASAKAGPH RTVPQRAAGR ENSTTRP00000001340/1-139 YVHGLQQQQL LGYITQQEAL ACAALLRDST KRALAKAGCH RTISQRASGS bmy_21396T0/1-147 YVHGLQQQQL LAYITQQEAL ACAAILRDST KRASAKAGCH RTISQRA--- BACU018484/1-147 YVHGLQQQQL LGYITQQEAL ACAAILRDST KRASAKAGCH RTVSQRASGG 151 200 ENSP00000445786/1-139 TRRCPSVLPV SVVLPRAQSK RRQVLRN--- --- ENSBTAP00000004673/1-145 TRTQPSARPV CVIPLRARST RLPSLRSRAV HKL ENSTTRP00000001340/1-139 TRTWPSALPV FVVPLRTQST GLRSLRQ--- --- bmy_21396T0/1-147 ---------- ---------- ---------- --- BACU018484/1-147 TRTRPSALPV FVVPLRAQSI GLRSLRTKAL HKL