KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:38 2014 Check: 00 .. Name: ENSTTRP00000011743/1-556 Len: 739 Check: 21 Weight: 1.00 Name: ENSP00000358582/1-739 Len: 739 Check: 3970 Weight: 1.00 Name: ENSBTAP00000004711/1-739 Len: 739 Check: 1310 Weight: 1.00 Name: bmy_17296T0/1-711 Len: 739 Check: 4472 Weight: 1.00 Name: BACU002689/1-739 Len: 739 Check: 3605 Weight: 1.00 // 1 50 ENSTTRP00000011743/1-556 ---------- ---------- ---------- --------HM TQGSDMSGVF ENSP00000358582/1-739 MPYLGSEDVV KELKKALCNP HIQADRLRYR NVIQRVIRYM TQGLDMSGVF ENSBTAP00000004711/1-739 MPYLGSEDVV KELKKALCNP HIQADRLRYR SVIQRVIRHM TQGVDMSGVF bmy_17296T0/1-711 MPYLGSEDVV KELKKALCNP HIQADRLRYR NVIQRVIRHM TQGSDMSGVF BACU002689/1-739 MPYLGSEDVV KELKKALCNP HIQADRLRYR NVIQRVIRHM TQGSDMSGVF 51 100 ENSTTRP00000011743/1-556 MEKVKASATI DIXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358582/1-739 MEMVKASATV DIVQKKLVYL YMCTYAPLKP DLALLAINTL CKDCSDPNPM ENSBTAP00000004711/1-739 MEMVKASATV DIVQKKLVYL YMCTYAPLKP DLALLAINTL CKDCSDPNPM bmy_17296T0/1-711 MEMVKASATI DIVQKKLVYL YMCTYAPLKP DLALLAINTL CKDCSDPNPM BACU002689/1-739 MEMVKASATI DIVQKKLVYL YMCTYAPLKP DLALLAINTL CKDCSDPNPM 101 150 ENSTTRP00000011743/1-556 XXXXXXXXXX XXXLRGVQEY IQQPALNGLH DKASYVRRVA VLGCAKMHTL ENSP00000358582/1-739 VRGLALRSMC SLRMPGVQEY IQQPILNGLR DKASYVRRVA VLGCAKMHNL ENSBTAP00000004711/1-739 VRGLALRSMC SLRMPGVQEY IQQPILNGLR DKASYVRRVA VLGCAKMHNL bmy_17296T0/1-711 VRGLALRSMC SLRLPGVQEY IQQPVLNGLQ DKASYVRRVA VLGCAKMHTL BACU002689/1-739 VRGLALRSMC SLRLPGVQEY IQQPVLNGLQ DKASYVRRVA VLGCAKMHTL 151 200 ENSTTRP00000011743/1-556 HGDSEVYGAL VNELYSLLRD QDPIVVVNCL RSLEEILKQE GGVVINKPIA ENSP00000358582/1-739 HGDSEVDGAL VNELYSLLRD QDPIVVVNCL RSLEEILKQE GGVVINKPIA ENSBTAP00000004711/1-739 HGDSEVDGAL VNELYSLLRD QDPIVVVNCL RSLEEILKQE GGVVINKPIA bmy_17296T0/1-711 HGDSEVDGAL VNELYSLLRD QDPIVVVNCL RSLEEILKQE GGVVINKPIA BACU002689/1-739 HGDSEVDGAL VNELYSLLRD QDPIVVVNCL RSLEEILKQE GGVVINKPIA 201 250 ENSTTRP00000011743/1-556 HHLLNRMSKL DQWGQAXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358582/1-739 HHLLNRMSKL DQWGQAEVLN FLLRYQPRSE EELFDILNLL DSFLKSSSPG ENSBTAP00000004711/1-739 HHLLNRMSKL DQWGQAEVLN FLLRYQPRSE EELFDILNLL DSFLKSSSPG bmy_17296T0/1-711 HHLLNRMSTL DQWGQAEVLN FLLRYQPRSE EELFDILNLL DGFLKSSSPG BACU002689/1-739 HHLLNRMSTL DQWGQAEVLN FLLRYQPRSE EELFDILNLL DGFLKSSSPG 251 300 ENSTTRP00000011743/1-556 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358582/1-739 VVMGATKLFL ILAKMFPHVQ TDVLVRVKGP LLAACSSESR ELCFVALCHV ENSBTAP00000004711/1-739 VVMGATKLFL ILAKKFPHVQ TDVLMQVKGP LLAACSSESR ELCFAALCHV bmy_17296T0/1-711 VVMGATKLFL ILAKNFPHVQ TDVLMQVKGT LLAACSSESR ELCFAALCHV BACU002689/1-739 VVMGATKLFL ILAKNFPHVQ TDVLMQVKGT LLAACSSESR ELCFAALCHV 301 350 ENSTTRP00000011743/1-556 XXVLHSLPGH FSSHYKKFF- SYSEPHYIKL QKVEVLCELV NDENVQQVLE ENSP00000358582/1-739 RQILHSLPGH FSSHYKKFFC SYSEPHYIKL QKVEVLCELV NDENVQQVLE ENSBTAP00000004711/1-739 RQILHSLPGH FSSHYKKFFC SYSEPHYIKL QKVEVLCELV NDENVQQVLE bmy_17296T0/1-711 RQVLHSLPGH FSSHYKKFFC SYSEPHYIKL QKVEVLCELV NDENVQQVLE BACU002689/1-739 RQVLHSLPGH FSSHYKKFFC SYSEPHYIKL QKVEVLCELV NDENVQQVLE 351 400 ENSTTRP00000011743/1-556 ELRGYCTDVS ADFAQAAIFA IXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358582/1-739 ELRGYCTDVS ADFAQAAIFA IGGIARTYTD QCVQILTELL GLRQEHITTV ENSBTAP00000004711/1-739 ELRGYCTDVS ADFAQAAILA IGGIARTYTD QCMQILTELL GLRQEHITTV bmy_17296T0/1-711 ELRGYCTDVS ADFAQAAIFA IGGIARTYTD QCVQILTELL GLQQEHITTV BACU002689/1-739 ELRGYCTDVS ADFAQAAIFA IGGIARTYTD QCVQILTELL GLRQEHITTV 401 450 ENSTTRP00000011743/1-556 VVQTFRDLVW LCPQCTEAVC QALPGCEESI QDSEGKQALI WLLGVHGKRI ENSP00000358582/1-739 VVQTFRDLVW LCPQCTEAVC QALPGCEENI QDSEGKQALI WLLGVHGERI ENSBTAP00000004711/1-739 VVQTFRDLAW LCPQCTEAVC QALPGCEENI QDSEGKQALI WLLGVHGKRI bmy_17296T0/1-711 VVQTFRDLVW LCPQCTEAVC QALPGCEESI QDSEGKQALI WLLGVHGERI BACU002689/1-739 VVQTFRDLVW LCPQCTEAVC QALPGCEESI QDSEGKQALI WLLGVHGERI 451 500 ENSTTRP00000011743/1-556 PNAPYVLEDF VENVKSETFP AVKMELLTAL LRLFLSRPAE CQDTLGRLLY ENSP00000358582/1-739 PNAPYVLEDF VENVKSETFP AVKMELLTAL LRLFLSRPAE CQDMLGRLLY ENSBTAP00000004711/1-739 PNAPYVLEDF IENVKSETFP AVKMELLTAV LRLFFSRPAE CQDMLGRLLH bmy_17296T0/1-711 PNAPYVLEDF VEN------- ---------L SRWSCSR--- ---------L BACU002689/1-739 PNAPYVLEDF VENVKSEIFP AVKMELLTAL LRLFLSRPAE CQDTLGRLLY 501 550 ENSTTRP00000011743/1-556 YCIEEEKDMA VRDRGLFYYR LLLAGIDEVK RILRSPQSDP SLRLLEDQAE ENSP00000358582/1-739 YCIEEEKDMA VRDRGLFYYR LLLVGIDEVK RILCSPKSDP TLGLLEDPAE ENSBTAP00000004711/1-739 YCIEEEKDMA VRDRGLFYYR LLLAGISEAK QILCSPKSDP SLRLLEDQAE bmy_17296T0/1-711 CCAFSSLAPP IRDRGLFYYR LLLAGIDEVK QILCSPKSDP SLRLLEDQAE BACU002689/1-739 YCIEEEKDMA VRDRGLFYYR LLLAGIDEVK RILCSPKSDP SLRLLEDQAE 551 600 ENSTTRP00000011743/1-556 RPVNSWASDF NTLVPVYGKA RWATISKCQ- VERHDPELPN TA-FATS--- ENSP00000358582/1-739 RPVNSWASDF NTLVPVYGKA HWATISKCQG AERCDPELPK TSSFAASGPL ENSBTAP00000004711/1-739 RPVNSWALDF NTLVPVYGKA RWATLSKCQG VEHHGPELPN TAAFPTSGPL bmy_17296T0/1-711 RPVNSWASDF NTLVPVYGKA RWATISKCQG VERRGPELPN TASFATSGPL BACU002689/1-739 RPVNSWASDF NTLVPVYGKA RWATISKCQG VERRGPELPN PAPFATSGPL 601 650 ENSTTRP00000011743/1-556 ---------- ---------- ---------- ---------- ---------- ENSP00000358582/1-739 IPEENKERVQ ELPDSGALML VPNRQLTADY FEKTWLSLKV AHQQVLPWRG ENSBTAP00000004711/1-739 IPEENKESVQ ELPDSGALML IPNHQLTAEC FEKTWLSLKV AHQQVFPWQG bmy_17296T0/1-711 IPEENKERVQ ELPDSRALML VPNHQLTAEC FEKTWLSLKV AHQQVFPWQG BACU002689/1-739 IPEENKERVQ ELPDSRALML VPNHQLTAAC FEKTWLSLKV AHQQVFPWQG 651 700 ENSTTRP00000011743/1-556 ---------- ---------- ---------- ---------- ---------- ENSP00000358582/1-739 EFHPDTLQMA LQVVNIQTIA MSRAGSRPWK AYLSAQDDTG CLFLTELLLE ENSBTAP00000004711/1-739 AVHPDTLQMA LQVVNIQTIA MSRAGTQPWK AYLSAQDDTG CLFLTELLLE bmy_17296T0/1-711 AVHPDTLQMA LQVVNIQTIA MNRAGAQPWK AYLSAQDDTG CLFLTELLLE BACU002689/1-739 AIHPDTLQMA LQVVNIQTIA MNRAGAQPWK AYLSAQDDTG CLFLTELLLE 701 750 ENSTTRP00000011743/1-556 ---------- ---------- ---------- --------- ENSP00000358582/1-739 PGNSEMQISV KQNEARTETL NSFISVLETV IGTIEEIKS ENSBTAP00000004711/1-739 PANLQMQISV KQSEARTETL KSFISVLETV IGTIGDIKS bmy_17296T0/1-711 PENLQMQISV KQNKARTETL NSFISVLETV IGTIGDIKS BACU002689/1-739 PENLQMQISV KQNKARTETL NSFISVLETV IGTIGDIKS