KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:39 2014 Check: 00 .. Name: ENSP00000358576/1-532 Len: 545 Check: 7052 Weight: 1.00 Name: bmy_17297T0/1-495 Len: 545 Check: 191 Weight: 1.00 Name: ENSBTAP00000004713/1-541 Len: 545 Check: 8386 Weight: 1.00 Name: ENSTTRP00000011760/1-468 Len: 545 Check: 1651 Weight: 1.00 Name: BACU019939/1-465 Len: 545 Check: 7834 Weight: 1.00 // 1 50 ENSP00000358576/1-532 MNGVLIPHTP IAVDFWSLRR AGTARLFFLS HMHSDHTVGL SSTWARPLYC bmy_17297T0/1-495 MNGVLIPQTP IAVDFWSLRR AGSARLFFLS HMHSDHTVGL SSTWTRPLYC ENSBTAP00000004713/1-541 MNGVLIPHTP IAVDFWSLRR AGSARLFFLT HMHSDHTVGL TSTWTRPLYC ENSTTRP00000011760/1-468 ---------- ---------- ---------- ---------- ---------- BACU019939/1-465 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000358576/1-532 SPITAHLLHR HLQVSKQWIQ ALEVGESHVL PLDEIGQETM TVTLLDANHC bmy_17297T0/1-495 SPVTAYLLHR HRQVSKQWIR ALEVG----- ---------- ---------- ENSBTAP00000004713/1-541 SPITAYLLHR HLQVSKQWIR ALEVGESHVL PLDEVGRETM TVTLLDANHC ENSTTRP00000011760/1-468 ---------- ---VSKQWIR ALEVGESHVL PLDEVGRETM TVTLIDANHC BACU019939/1-465 ---------- ---VSKQWIR ALEVGESHVL PLDEVGRETM TVTLIDANHC 101 150 ENSP00000358576/1-532 PGSVMFLFEG YFGTILYTGD FRYTPSMLKE PALTLGKQIH TLYLDNTNCN bmy_17297T0/1-495 ---------- ---------D FRYTPSMLKE PALRLGKQIH TLYLDNTNCN ENSBTAP00000004713/1-541 PGSVMFLFEG YFGTILYTGD FRYTPSMLKE PALRLGKQIH TLYLDNTNCN ENSTTRP00000011760/1-468 PGSVMFLFEG YFGTILYTGD FRYTPSMLKE PALRLGKQIH TLYLDNTNCN BACU019939/1-465 PGSVMFLFEG YFGTILYTGD FRYTPSMLKE PALRLGKQIH TLYLDNTNCN 151 200 ENSP00000358576/1-532 PALVLPSRQE AAHQIVQLIR KHPQHNIKIG LYSLGKESLL EQLALEFQTW bmy_17297T0/1-495 PALVLPSKEE AARQIVELIR KHPQHNIKIG LYSLGKESLL EQLALEFQTW ENSBTAP00000004713/1-541 PDLVLPSQEE AARQIVELIR KHPQHNIKIG LYSLGKESLL ERLALEFQTW ENSTTRP00000011760/1-468 PALVLPSQEE AARQIVELIR KHPQHNIKIG LYSLGKESLL EQLALEFRTW BACU019939/1-465 PALVLPSKEE AARQIVELIR KHPQHNIKIG LYSLGKESLL EQLALEFQTW 201 250 ENSP00000358576/1-532 VVLSPRRLEL VQLLGLADVF TVEEKAGRIH AVDHMEICHS NMLRWNQTHP bmy_17297T0/1-495 VVLSPRRLEL VQLLGLADVF TVEEKAGRIH AVDHMEICHS AMLRWNQTHP ENSBTAP00000004713/1-541 VVLSPRRLEL VQLLGLADVF TVEEKAGRIH AVDHMEICHS AMLRWNQTHP ENSTTRP00000011760/1-468 VVLSPRRLEL VQLLGLADVF TVEEKAGRIH AVDHMEICHS AMLRWNQTHP BACU019939/1-465 VVLSPRRLEL VQLLGLADVF TVEEKAGRIH AVDHMEICHS AMLRWNQTHP 251 300 ENSP00000358576/1-532 TIAILPTSRK IHSSHPDIHV IPYSDHSSYS ELRAFVAALK PCQVVPIVSR bmy_17297T0/1-495 TIAILPTSRK IYRSHPDIHI IPYSDHSSYP ELRAFVEALR PCQVVPIVRR ENSBTAP00000004713/1-541 TIAILPTSRK IYRSHPNIHV IPYSDHSSYS ELRVFVAALK PCQVVPIVRR ENSTTRP00000011760/1-468 TIAILPTSRK IYRSHPDIHI IPYSDHSSYP ELCAFVEALR PCQVVPIVRR BACU019939/1-465 TIAILPTSRK IYRSHPDIHI IPYSDHSSYP ELRAFVEALR PCQVVPIVRR 301 350 ENSP00000358576/1-532 RPCGG-FQDS LSPRISVPLI PDSVQQYMSS SSRKPSLLWL -LERRLKRPR bmy_17297T0/1-495 QPCRDYFQDS LSPRLSVPLI PDSVQQYMSS SSRNPSFLWL LLERKLKRLR ENSBTAP00000004713/1-541 QPCRDYFQDS LSPRLSVPLI PDSVQQYMSS SSRNPSFLWL FLERKLKRLR ENSTTRP00000011760/1-468 QPCRDYFQDS LSPRLSVPLI PDSVQQYMSS SSRNPSFLWL LLERKLKRLR BACU019939/1-465 QPCRDYFQDS LSPRLSVPLI PDSVQQYMSS SSRNPSFLWL LLERKLKRLR 351 400 ENSP00000358576/1-532 TQGVVFESPE ESADQSQADR DSKKAKKEKL SPWPADLEKQ PSHHPLRIKK bmy_17297T0/1-495 TQGVVFESLE ENADHSQADR DSKKTKNENL S---GELEKQ PSHHPLKIKQ ENSBTAP00000004713/1-541 TQGVVFESLE EDADHSQADR DSRKTKNENL A---GELEKQ PSHHPLQVKK ENSTTRP00000011760/1-468 TQGVVFESLE ENADHSQADR DLKKTKNENL S---GELEKR PSHHPLKIKK BACU019939/1-465 TQGVVFESLE ENADHSQADR DSKKTKNENL S---GELEKQ PSHHPLKIKK 401 450 ENSP00000358576/1-532 QLFPDLYSKE WNKAVPFCES QKRVTMLTAP LGFSVHLRST DEEFISQKTR bmy_17297T0/1-495 QSFPDICNKE WEGAVPSSES QKMVTVLTAP SGFSVHLRST EKEFPSPETG ENSBTAP00000004713/1-541 QSFPDVCCRE GEGAVPSSES QKMVTVVTTP SGFPVHLRST NEKFLSLETG ENSTTRP00000011760/1-468 QPFPDIRNKE WEGAVPSSES QKMVTVLTAP SGFSVHLGST DKEFSSPETG BACU019939/1-465 QSFPDVCNKE WEGAVPSSES QKMVTVLTAP SGFSVHLRST DKEFPSPETG 451 500 ENSP00000358576/1-532 EEIGLGSPLV PMGDDDGGPE ATGNQSAWMG HGSPLSHSSK GTPLLATEFR bmy_17297T0/1-495 EEIGVGPYLV PRG-DNAGSA ATGNQRAWMS QDSPQSHSSK AAPLLAPEYR ENSBTAP00000004713/1-541 EEIGVGPYLV RMG-DSVASA ATENQRAWIG QDSRLSPSSE AAPLLAPEFR ENSTTRP00000011760/1-468 EEISVGPYLV PRG-DNAGSA ATGNQRAWMG QDSPQSYSSK AAPLLAPEYR BACU019939/1-465 EEIGVGPYLV PRG-DNAGSA ATGNQRAWMG QDSPQSHSSR AAPLLAPEYR 501 550 ENSP00000358576/1-532 GLALKYLLTP VNFFQAGYSS RRFDQQVEKY HKPC------ ----- bmy_17297T0/1-495 GLALKYLLTP VNFLQAGFSS RGFDQQAEKY HQLLLKYRQE SIE-- ENSBTAP00000004713/1-541 GLALKYLLTP VDFIQTGFSS RVFDQQVEKY HKLLSTDGRI QNDNL ENSTTRP00000011760/1-468 GLALKYLLTP VNFLQVGFSS RGFDQQVEKY HQPCS----- ----- BACU019939/1-465 GLALKYLLTP VNFLQAGFSS RGFDQQAEKY HQ-------- -----