KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:39 2014 Check: 00 .. Name: ENSP00000292566/1-302 Len: 317 Check: 1587 Weight: 1.00 Name: ENSBTAP00000004717/1-303 Len: 317 Check: 4542 Weight: 1.00 Name: bmy_17485T0/1-284 Len: 317 Check: 8578 Weight: 1.00 Name: BACU012046/1-278 Len: 317 Check: 7534 Weight: 1.00 Name: ENSTTRP00000014077/1-298 Len: 317 Check: 1370 Weight: 1.00 // 1 50 ENSP00000292566/1-302 MAAAAAETPE VLRECGCKGI RTCLICERQR GSDPPWELPP AKTYRFIYCS ENSBTAP00000004717/1-303 MAAAAVAPPE VLRECGCKGI RTCLICERQR GGDPPWQHPS QRTHRFIYYP bmy_17485T0/1-284 MAAAAVAAPE VLRECGCKGI RTCLICERQR GGDPTWQHP- --LQL----- BACU012046/1-278 ---------- ---------- ---------- -----MLQK- --THQFIYYA ENSTTRP00000014077/1-298 MAAAAVAAPE VLRECGCKGI RTCLICERQR GGDQPWQPX- --XXXXXXXX 51 100 ENSP00000292566/1-302 DTGWAVGTEE SDFEGWAFPF PGVMLIEDFV TREEEAELVR LMDRDPWKLS ENSBTAP00000004717/1-303 DTGWAVGAEE SDFEGWAFPF PGVTLIEDFV TPEEEAEMVQ LMDRDPWKLS bmy_17485T0/1-284 --GQGLGKVD DA-------- SGVTLIEDFV TPAEEAEMVR LMDRDPWKLS BACU012046/1-278 DTGWAVGAEE SDFEGWAFPF PGVTLIEDFV TPAEEAEMVR LMDRDPWKLS ENSTTRP00000014077/1-298 DTG-AVRAEE SDFEGWAFPI PGVTLIEDFV TPAEEAEMVR LMDRDPWKLS 101 150 ENSP00000292566/1-302 QSGRRKQ--- ---------- -DYGPKVNFR KQKLKTEGFC GLPSFSREVV ENSBTAP00000004717/1-303 QSGRRKQ--- ---------- -DYGPKVNFR KQKLKRAGFR GLPSFSREVV bmy_17485T0/1-284 QSGRRKQ--- ---------- -DYGPKVNFR KQKLKTAGFR GLPSFSREVV BACU012046/1-278 QSGRRKQTLL TDLSEARPRT SDYGPKVNFR KQKLKTAGFR GLPSFSREVV ENSTTRP00000014077/1-298 QSGRRKQ--- ---------- -DYGPKVNFR KQKLKTAGFR GLPSFSREVV 151 200 ENSP00000292566/1-302 RRMGLYPGLE GFRPVEQCNL DYCPERGSAI DPHLDDAWLW GERLVSLNLL ENSBTAP00000004717/1-303 RRMGLYPILE DFRPVEQCNL DYSPERGSAI DPHLDDAWLW GERLVSLNLL bmy_17485T0/1-284 RRMGLYPVLE DFRPVEQCNL DYCPERGSAI EPHLDDTWLW GERLVSLNLL BACU012046/1-278 RRMGLYPVLE DFRPVEQCNL DYCPERGSAI DPHLDDSWLW GERLVSLNLL ENSTTRP00000014077/1-298 RRMGLYPVLE DFRPVEQCNL DYCPERGSAI DPHLDDTWLW GERLVSLNLL 201 250 ENSP00000292566/1-302 SPTVLSMCRE APGSLLLCSA PSAAPEALVD SVIAPSRSVL CQEVEVAIPL ENSBTAP00000004717/1-303 SPTVLSMSRE APGSLLLCLA PSGFPEALAD SAMAPSRSVP CQEVEVAVPL bmy_17485T0/1-284 APTVLSMSRE APGSLLLCLA PSGLPQAPAE GAPAPGRSVP CREVEVAVPL BACU012046/1-278 APTVLSMSRE APGSLLLCLA PSGLPQAPAE GAPAPGRAVP CREVEVAVPL ENSTTRP00000014077/1-298 SPTVLSMSRE APGSLLLCLA PSGFPQAPVE GATAPGRSVP CREVEVAVPL 251 300 ENSP00000292566/1-302 PARSLLVLTG AARHQWKHAI HRRHIEARRV CVTFRELSAE FGPGGRQQEL ENSBTAP00000004717/1-303 PRRSLVVLRG GARHQWKHAI HRRHIGARRV GVTFRELSAE FGPGGKQQEL bmy_17485T0/1-284 PRRALLVLTR AARHQWKHAI HRRHIGARRV SATFRELSAE FGPGGRQREL BACU012046/1-278 PRRALLVLTR AARHQWKHAI HRRHIGARRV SATFRELSAE FGPGGRQREL ENSTTRP00000014077/1-298 PRRALLVLTR AARHQWKHAI HRRHIGARRV SATFRELSAE FGPSGRQREL 301 350 ENSP00000292566/1-302 GQELLRIALS FQGRPV- ENSBTAP00000004717/1-303 GRELLQMALS FQGRPTT bmy_17485T0/1-284 GQELLQTSLS FQGRPT- BACU012046/1-278 GQELLQTSLS FQGRPT- ENSTTRP00000014077/1-298 GQELLQTSLS FQGRPT-