KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:24:40 2014  Check: 00 ..

 Name: ENSBTAP00000004729/1-199  Len:    200  Check:  6561  Weight:  1.00
 Name: ENSP00000355370/1-200     Len:    200  Check:  1179  Weight:  1.00
 Name: bmy_21027T0/1-200         Len:    200  Check:  2155  Weight:  1.00
 Name: BACU017266/1-200          Len:    200  Check:  2173  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000004729/1-199  MAFAEHSLLP PHRRDLCSRS IWLARKIRSD LTALVDSYMK HQGLNGNMNL 
ENSP00000355370/1-200     MAFTEHSPLT PHRRDLCSRS IWLARKIRSD LTALTESYVK HQGLNKNINL 
bmy_21027T0/1-200         MAFTEHSPLT PHRRDLCSRS VWLARKIRSD LTALMESYVK HQGLNENINL 
BACU017266/1-200          MAFTEHSPLT PHRRDLCSRS VWLARKIRSD LTALMESYVK HQGLNENINL 


                          51                                                 100
ENSBTAP00000004729/1-199  DTLEGVPTAS SSRWSELTEA ERLQENLQAY RAFHGMLARL LEDQRAHFTP 
ENSP00000355370/1-200     DSADGMPVAS TDQWSELTEA ERLQENLQAY RTFHVLLARL LEDQQVHFTP 
bmy_21027T0/1-200         DSVRGVPVAS TDRWSELSEA ERLQENLQAY RTFHVMLARL LEDQRVHFTP 
BACU017266/1-200          DSVRGVPAAS TDRWSELSEA ARLQESLQAY RTFHVMLARL LEDQRVHFTP 


                          101                                                150
ENSBTAP00000004729/1-199  AEEDFHQAIH AVLLQVAAFA YQLEELMALL EHRVPPREAG GPPLLPGDAG 
ENSP00000355370/1-200     TEGDFHQAIH TLLLQVAAFA YQIEELMILL EYKIPRNEAD GMPINVGDGG 
bmy_21027T0/1-200         AEDDFHQAIH TILLQVAAFA YQLEELMVLL EHKIPSSEAD GMPLIVGDGG 
BACU017266/1-200          AEDDFHQAIH TILLQVAAFA YQLEELMVLL EHKIPSSEAD GMPLIVGDGG 


                          151                                                200
ENSBTAP00000004729/1-199  LFEKKLWGLK VLQELSRWTV RSVHDLRTI- SRQSGVPACG SRCATKDKRM 
ENSP00000355370/1-200     LFEKKLWGLK VLQELSQWTV RSIHDLRFIS SHQTGIPARG SHYIANNKKM 
bmy_21027T0/1-200         LFEKKLWGLK VLQELSQWTV RSVRDLRVIS SCQTGIPGHG SHYTAKDKKM 
BACU017266/1-200          LFEKKLWGLK VLQELSQWTV RSVRDLRVIS SCQTGIPGHG SHYTAKDKKM