KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:40 2014 Check: 00 .. Name: ENSP00000275016/1-469 Len: 469 Check: 6858 Weight: 1.00 Name: ENSTTRP00000007991/1-468 Len: 469 Check: 7631 Weight: 1.00 Name: ENSBTAP00000004736/1-469 Len: 469 Check: 5837 Weight: 1.00 Name: bmy_00014T0/1-339 Len: 469 Check: 5425 Weight: 1.00 Name: BACU015829/1-469 Len: 469 Check: 8102 Weight: 1.00 // 1 50 ENSP00000275016/1-469 MELISPTVII ILGCLALFLL LQRKNLRRPP CIKGWIPWIG VGFEFGKAPL ENSTTRP00000007991/1-468 MEFISPTVVI ILGCVALLLF LQRKNLRGPP CIGGWIPWIG AGFEFGKTPL ENSBTAP00000004736/1-469 MEFISPTVII ILGCVAVLLF LQWKNLRRPP CIRGWIPWIG AGFEFGKTPL bmy_00014T0/1-339 MEFISPTVVI ILGCVALLLF LQWKNLRGPP CIGGWIPWIG AGFEFGKTPL BACU015829/1-469 MEFISPTVVI ILGCVALLLF LQWKNLRGPP CIGGWIPWIG AGFEFGKTPL 51 100 ENSP00000275016/1-469 EFIEKARIKY GPIFTVFAMG NRMTFVTEEE GINVFLKSKK VDFELAVQNI ENSTTRP00000007991/1-468 EFIEKARIKX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000004736/1-469 EFIEKARIKY GPVFTVIVMG TRMTFVTEEE GINVFLKSKE INFELAVQNP bmy_00014T0/1-339 EFIEKARIKY GPIFTIVALG TRMTFVTEEE GINVFLKSKE VNFELAVQTP BACU015829/1-469 QFIEKARIKY GPIFTIVAMG TRMTFVTEEE GINVFLKSKE VNFELAVQTP 101 150 ENSP00000275016/1-469 VYRTASIPKN VFLALHEKLY IMLKGKMGTV NLHQFTGQLT EELHEQLENL ENSTTRP00000007991/1-468 XXXXXSIPKN IFLKLHEKLY IMVKGKMGTF NLYRFTGQLT EELHKQLENL ENSBTAP00000004736/1-469 VYHTASIAKN IFLKLHEKLY ITVKGKMGIF NLYKFTGQLT EELQEQLQNL bmy_00014T0/1-339 VYRTASIPKN IFLKLHEKLY IMVKGKMGTF NLYRFTGQLT EELHEQLENL BACU015829/1-469 VYRTASIPKN IFLKLHEKLY IMVKGKMGTF NLYRFTGQLT EELHEQLENL 151 200 ENSP00000275016/1-469 GTHGTMDLNN LVRHLLYPVT VNMLFNKSLF STNKKKIKEF HQYFQVYDED ENSTTRP00000007991/1-468 GPHGTMDLNN LVRHFLYPVT VNVLFKKGLF PTNERKIREF HQHFQAYDEG ENSBTAP00000004736/1-469 GTHGTTDLNK FMRHLLYPVT VNILFKKGLF PTDERKIREF HQHFQAYDEG bmy_00014T0/1-339 GPHGTMDLNN LVRHLLYPVT VNVLFKKGLF PTNERKIREF HQHFQAYDEG BACU015829/1-469 GPHGTMDLNN LVRHLLYPVT VNVLFKKGLF PTNERKIREF HQHFQAYDEG 201 250 ENSP00000275016/1-469 FEYGSQLPEC LLRNWSKSKK WFLELFEKNI PDIKACKSAK DNSMTLLQAT ENSTTRP00000007991/1-468 FEYGSQLPEC LLI-WSKSKK WLLALXXXXI PDIKTCRSAK DNSPTVMQAL ENSBTAP00000004736/1-469 FEYGSQLPEC LLRNWSKSKK WLLALFEKNI PDIKTHKSAK ENYPTVMQAV bmy_00014T0/1-339 FEYGSQLPEC LLRNWSKSKN WLLALFEKNI PDIKTSKSAK DNSPTVMQAL BACU015829/1-469 FEYGSQLPEC LLRNWSKSKN WLLALFEKNI PDIKTCKSAK DNSPTVMQAL 251 300 ENSP00000275016/1-469 LDIVETETSK ENSPNYGLLL LWASLSNAVP VAFWTLAYVL SHPDIHKAIM ENSTTRP00000007991/1-468 LDLLEMETNE QKSPNYGLLL LWASLSNAVP VAFWTFAFVL SHPNIHRTIV ENSBTAP00000004736/1-469 LDLLEMEANE QKSPNYGLLL LWASLSNTVP VAFWTFAFVL SHPNIHRTIM bmy_00014T0/1-339 LDLLEMETNE QKSPNYGLLL LWASLSNAVP VAFWTFAFVL SHPNIHRTIM BACU015829/1-469 LDLLEMETNE QKSPNYGLLL LWASLSNAVP VAFWTFAFVL SHPNVHRTIM 301 350 ENSP00000275016/1-469 EGISSVFGKA GKDKIKVSED DLENLLLIKW CVLETIRLKA PGVITRKVVK ENSTTRP00000007991/1-468 EGISSVFGTA XXXXXXXXXX XXXXLPLIKW CILETIRLRA PGVITRKVLK ENSBTAP00000004736/1-469 EGISSVFGTA GKDKIKVSED DLKKLPLIKW CILETIRLRA PGVIARKVLK bmy_00014T0/1-339 EGISSVFGTA G------TKT ELN------- CIIEEI---- ---------- BACU015829/1-469 EGISSVFGTA GKDKIKVSED DLKKLPLIKW CILETIRLRA PGVITRKVLK 351 400 ENSP00000275016/1-469 PVEILNYIIP SGDLLMLSPF WLHRNPKYFP EPELFKPERW KKANLEKHSF ENSTTRP00000007991/1-468 PVKILNYTVP SGDLLMLSPF WLHRNPKYFP EPDLFKPERW KKANLEKHAF ENSBTAP00000004736/1-469 PVKILDYTVP SGDLLMLSPF WLHRNPKYFP EPDLFKPERW KEANLEKHAF bmy_00014T0/1-339 ---------- ---------- ---------- ---------- -----SNNVY BACU015829/1-469 PVKILNYTVP SGDLLMLSPF WLHRNPKYFP EPDLFKPERW KKANLEKHAF 401 450 ENSP00000275016/1-469 LDCFMAFGSG KFQCPARWFA LLEVQMCIIL ILYKYDCSLL DPLPKQSYLH ENSTTRP00000007991/1-468 LDCFMAFGSG KYQCPGRWLA LLEIQIFIIL ILYYYDCSLL DPLPRQSSLH ENSBTAP00000004736/1-469 LDCFMAFGSG KYQCPGRWLA LLEIQICIIL IFYYYDCSLL DPLPKQSSLH bmy_00014T0/1-339 LSHIM----G KVKCP----- ---------- ---------- ---------- BACU015829/1-469 LDCFMAFGSG KYQCPGRWLA LLEIQIFIIL ILYYYDCSLL DPLPRQSSLH 451 500 ENSP00000275016/1-469 LVGVPQPEGQ CRIEYKQRI ENSTTRP00000007991/1-468 LVGVQQPEGQ CRIQFKQRK ENSBTAP00000004736/1-469 LVGVQQPEGR CRIQFKQRK bmy_00014T0/1-339 ---------- --------- BACU015829/1-469 LVGVQQPEGQ CRIQFKQRK