KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:41 2014 Check: 00 .. Name: ENSBTAP00000004747/1-720 Len: 776 Check: 5219 Weight: 1.00 Name: ENSP00000290246/1-720 Len: 776 Check: 4581 Weight: 1.00 Name: bmy_06244T0/1-708 Len: 776 Check: 7431 Weight: 1.00 Name: ENSTTRP00000005846/1-720 Len: 776 Check: 6210 Weight: 1.00 Name: BACU011366/1-747 Len: 776 Check: 9068 Weight: 1.00 // 1 50 ENSBTAP00000004747/1-720 ---------- ---------- ---------- --MPPPSDIV KVAIEWPGAN ENSP00000290246/1-720 ---------- ---------- ---------- --MPPPSDIV KVAIEWPGAN bmy_06244T0/1-708 ---------- ---------- ---------- --MPPPSDIV KVAIEWPGAN ENSTTRP00000005846/1-720 ---------- ---------- ---------- --MPPPSDIV KVAIEWPGAN BACU011366/1-747 MFPKRGTTGV TPGAWERQLC LCVLEKQGPL GTMPPPSDIV KVAIEWPGAN 51 100 ENSBTAP00000004747/1-720 AQLLEIDQKR PLASIIKEVC DGWSLPNPEY YTLRYADGPQ LYITEQTRSD ENSP00000290246/1-720 AQLLEIDQKR PLASIIKEVC DGWSLPNPEY YTLRYADGPQ LYITEQTRSD bmy_06244T0/1-708 AQLLEIDQKR PLASIIKEVC DGWSLPNPEY YTLRYADGPQ LYITEQ---- ENSTTRP00000005846/1-720 AQLLEIDQKR PLASIIKEVC DGWSLPNPEY YTLRYADGPQ LYITEQTRSD BACU011366/1-747 AQLLEIDQKR PLASIIKEVC DGWSLPNPEY YTLRYADGPQ LYITEQ---- 101 150 ENSBTAP00000004747/1-720 IKNGTILQLA ISPSRAARQL MERTQSSSME TRLDAMKELA KLSADVTFAT ENSP00000290246/1-720 IKNGTILQLA ISPSRAARQL MERTQSSNME TRLDAMKELA KLSADVTFAT bmy_06244T0/1-708 ---------- ---SRAARQL MERTQSSNME TRLDAMKELA KLSADVTFAT ENSTTRP00000005846/1-720 IKNGTILQLA ISPSRAARQL MERTQSSNME TRLDAMKELA KLSADVTFAT BACU011366/1-747 ---------- ---SRAARQL MERTQSSNME TRLDAMKELA KLSADVTFAT 151 200 ENSBTAP00000004747/1-720 EFINMDGIVV LTRLVESGTK LLSHYSEMLA FTLTAFLELM DHGIVSWDMV ENSP00000290246/1-720 EFINMDGIIV LTRLVESGTK LLSHYSEMLA FTLTAFLELM DHGIVSWDMV bmy_06244T0/1-708 EFINMDGIVV LTRLVESGTK LLSHYSEMLA FTLTAFLELM DHGIVSWDMV ENSTTRP00000005846/1-720 EFINMDGIVV LTRLVESGTK LLSHYSEMLA FTLTAFLELM DHGIVSWDMV BACU011366/1-747 EFINMDGIVV LTRLVESGTK LLSHYSEMLA FTLTAFLELM DHGIVSWDMV 201 250 ENSBTAP00000004747/1-720 SITFIKQIAG YVSQPMVDVS ILQRSLAILE SMVLNSQSLY QKIAEEITVG ENSP00000290246/1-720 SITFIKQIAG YVSQPMVDVS ILQRSLAILE SMVLNSQSLY QKIAEEITVG bmy_06244T0/1-708 SITFIKQIAG YVSQPMVDVS ILQRSLAILE SMVLNSQSLY QKIAEEITVG ENSTTRP00000005846/1-720 SITFIKQIAG YVSQPMVDVS ILQRSLAILE SMVLNSQSLY QKIAEEITVG BACU011366/1-747 SITFIKQIAG YVSQPMVDVS ILQRSLAILE SMVLNSQSLY QKIAEEITVG 251 300 ENSBTAP00000004747/1-720 QLISHLQVSN QEIQTYAIAL INALFLKAPE DKRQ------ ------DMAN ENSP00000290246/1-720 QLISHLQVSN QEIQTYAIAL INALFLKAPE DKRQ------ ------DMAN bmy_06244T0/1-708 QLISHLQVSN QEIQTYAIAL INALFLKAPE DKRQDKHLNP LDLPVTDMAN ENSTTRP00000005846/1-720 QLISHLQVSN QEIQTYAIAL INALFLKAPE DKRQ------ ------DMAN BACU011366/1-747 QLISHLQVSN QEIQTYAIAL INALFLKAPE DKRQDKHLNP LDLPVTDMAN 301 350 ENSBTAP00000004747/1-720 AFAQKHLRSI ILNHVIRGNR PIKTEMAHQL YVLQVLTFNL LEERMMTKMD ENSP00000290246/1-720 AFAQKHLRSI ILNHVIRGNR PIKTEMAHQL YVLQVLTFNL LEERMMTKMD bmy_06244T0/1-708 AFAQKHLRSI ILNHVIRGNR PIKTEMAHQL YVLQVLTFNL LEERMMTKMD ENSTTRP00000005846/1-720 AFAQKHLRSI ILNHVIRGNR PIKTEMAHQL YVLQVLTFNL LEERMMTKMD BACU011366/1-747 AFAQKHLRSI ILNHVIRGNR PIKTEMAHQL YVLQVLTFNL LEERMMTKMD 351 400 ENSBTAP00000004747/1-720 PND------- -----QAQRD IIFELRRIAF DADSDPSNAP GSGTEKRKAM ENSP00000290246/1-720 PND------- -----QAQRD IIFELRRIAF DAESDPSNAP GSGTEKRKAM bmy_06244T0/1-708 PNDQLIHLLT VYFTSQAQRD IIFELRRIAF DAESDPSNVP GSGTEKRKAM ENSTTRP00000005846/1-720 PND------- -----QAQRD IIFELRRIAF DAESDPSNVP GSGTEKRKAM BACU011366/1-747 PND------- -----QAQRD IIFELRRIAF DAESDPSNVP GSGTEKRKAM 401 450 ENSBTAP00000004747/1-720 YTKDYKMLGF TNHINPAMDF TQTPPGMLAL DNMLYLAKVH QDTYIRIVLE ENSP00000290246/1-720 YTKDYKMLGF TNHINPAMDF TQTPPGMLAL DNMLYLAKVH QDTYIRIVLE bmy_06244T0/1-708 YTKDYKMLGF TNHINPAMDF TQTPPGMLAL DNMLYLAKVH QDTYIRIVLE ENSTTRP00000005846/1-720 YTKDYKMLGF TNHINPAMDF TQTPPGMLAL DNMLYLAKVH QDTYIRIVLE BACU011366/1-747 YTKDYKMLGF TNHINPAMDF TQTPPGMLAL DNMLYLAKVH QDTYIRIVLE 451 500 ENSBTAP00000004747/1-720 NSSREDKHEC PFGRSAIELT KMLCEILQVG ELPNEGRNDY HPMFFTHDRA ENSP00000290246/1-720 NSSREDKHEC PFGRSAIELT KMLCEILQVG ELPNEGRNDY HPMFFTHDRA bmy_06244T0/1-708 NSSREDKHEC PFGRSAIELT KMLCEILQVG ELPNEGRNDY HPMFFTHDRA ENSTTRP00000005846/1-720 NSSREDKHEC PFGRSAIELT RMLCEILQVG ELPNEGRNDY HPMFFTHDRA BACU011366/1-747 NSSREDKHEC PFGRSAIELT KMLCEILQVG ELPNEGRNDY HPMFFTHDRA 501 550 ENSBTAP00000004747/1-720 FEELFGICIQ LLNKTWKEMR ATAEDFNKVM QVVREQITRA LPSKPNSLDQ ENSP00000290246/1-720 FEELFGICIQ LLNKTWKEMR ATAEDFNKVM QVVREQITRA LPSKPNSLDQ bmy_06244T0/1-708 FEELFGICIQ LLNKTWKEMR ATAEDFNKVM QVVREQITRA LPSKPNSLDQ ENSTTRP00000005846/1-720 FEELFGICIQ LLNKTWKEMR ATAEDFNKVM QVVREQITRA LPSKPNSLDQ BACU011366/1-747 FEELFGICIQ LLNKTWKEMR ATAEDFNKVM QVVREQITRA LPSKPNSLDQ 551 600 ENSBTAP00000004747/1-720 FKSKLRSLSY SEILRLRQSE RMSQDDFQSP PIVELREKIQ PEILELIKQQ ENSP00000290246/1-720 FKSKLRSLSY SEILRLRQSE RMSQDDFQSP PIVELREKIQ PEILELIKQQ bmy_06244T0/1-708 FKSKLRSLSY SEILRLRQSE RMSQDDFQSP PIVELREKIQ PEILELIKQQ ENSTTRP00000005846/1-720 FKSKLRSLSY SEILRLRQSE RMSQDDFQSP PIVELREKIQ PEILELIKQQ BACU011366/1-747 FKSKLRSLSY SEILRLRQSE RMSQDDFQSP PIVELREKIQ PEILELIKQQ 601 650 ENSBTAP00000004747/1-720 RLNRLCEGSS FRKIGNRRRQ ERFWYCRLAL NHKVLHYGDL DDNPQGEVTF ENSP00000290246/1-720 RLNRLCEGSS FRKIGNRRRQ ERFWYCRLAL NHKVLHYGDL DDNPQGEVTF bmy_06244T0/1-708 RLNRLCEGSS FRKIGNRRRQ ERFWYCRLAL NHKVLHY--- ---------- ENSTTRP00000005846/1-720 RLNRLCEGSS FRKIGNRRRQ ERFWYCRLAL NHKVLHYGDL DDNPQGEVTF BACU011366/1-747 RLNRLCEGSS FRKIGNRRRQ ERFWYCRLAL NHKVLHYGDL DDNPQGEVTF 651 700 ENSBTAP00000004747/1-720 ESLQEKIPVA DIKAIVTGKD CPHMKEKSAL KQNKEVLELA FSILYDPDET ENSP00000290246/1-720 ESLQEKIPVA DIKAIVTGKD CPHMKEKSAL KQNKEVLELA FSILYDPDET bmy_06244T0/1-708 ------VPVA DIKAIVTGKD CPHMKEKSAL KQNKEVLELA FSILYDPDET ENSTTRP00000005846/1-720 ESLQEKIPVA DIKAIVTGKD CPHMKEKSAL KQNKEVLELA FSILYDPDET BACU011366/1-747 ESLQEKIPVA DIKAIVTGKD CPHMKEKSAL KQNKEVLELA FSILYDPDET 701 750 ENSBTAP00000004747/1-720 LNFIAPNKYE YCIWIDGLSA LLGKDMSSEL TKSDLDTLLS MEMKLRLLDL ENSP00000290246/1-720 LNFIAPNKYE YCIWIDGLSA LLGKDMSSEL TKSDLDTLLS MEMKLRLLDL bmy_06244T0/1-708 LNFIAPNKYE YCIWIDGLSA LLGKDMSSEL TKSDLDTLLS MEMKLRLLDL ENSTTRP00000005846/1-720 LNFIAPNKYE YCIWIDGLSA LLGKDMSSEL TKSDLDTLLS MEMKLRLLDL BACU011366/1-747 LNFIAPNKYE YCIWIDGLSA LLGKDMSSEL TKSDLDTLLS MEMKLRLLDL 751 800 ENSBTAP00000004747/1-720 ENIQIPEAPP PVPKEPSSYD FVYHYG ENSP00000290246/1-720 ENIQIPEAPP PIPKEPSSYD FVYHYG bmy_06244T0/1-708 ENIQIPEAPP PVPKEPSSYD FVYHYG ENSTTRP00000005846/1-720 ENIQIPEAPP PVPKEPSSYD FVYHYG BACU011366/1-747 ENIQIPEAPP PVPKEPSSYD FVYHYG