KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:42 2014 Check: 00 .. Name: ENSP00000315070/1-370 Len: 444 Check: 7810 Weight: 1.00 Name: ENSBTAP00000004748/1-358 Len: 444 Check: 5298 Weight: 1.00 Name: bmy_19843T0/1-401 Len: 444 Check: 2101 Weight: 1.00 Name: BACU013804/1-328 Len: 444 Check: 7398 Weight: 1.00 // 1 50 ENSP00000315070/1-370 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004748/1-358 ---------- ---------- ---------- ---------- ---------- bmy_19843T0/1-401 MVGLGKPTTD DVQGPSHERS MDATCAPTKA PTPTSAKEKE IPGNQPERVQ BACU013804/1-328 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000315070/1-370 ---------- ---------- ---MEGVDLL GFLIITLNCN VTMVGKLWFV ENSBTAP00000004748/1-358 ---------- ---------- ---MDQSDLL GFLVITLNCN VTMVGKIWLI bmy_19843T0/1-401 IPAGTHGIGI QSRGQDPLGL ELCMDQLDLL GFLVITLNCN VTMVGKIWLI BACU013804/1-328 ---------- ---------- ---MDQLDLL GFLVITLNCN VTMVGKIWLI 101 150 ENSP00000315070/1-370 LTMLLRMLVI VLAGRPVYQD EQERFVCNTL QPGCANVCYD VFSPVSHLRF ENSBTAP00000004748/1-358 FMVLLRMVVL ILAGSPVYQD EQERFVCNTL QPGCANVCYD IFAPVSHLRF bmy_19843T0/1-401 FMVLLRMVVL ILAGSPVYQD EQERFVCNTL QPGCANVCYD IFAPVSHLRF BACU013804/1-328 FMVLLRMVVL ILAGSPVYQD EQERFVCNTL QPGCANVCYD IFAPVSHLRF 151 200 ENSP00000315070/1-370 WLIQGVCVLL PSAVFSVYVL HRGATLAALG PRRCPDPREP ASGQRRCPRP ENSBTAP00000004748/1-358 WLIQSVSVLL PSAIFGVYVL HKGAELAARR SRGLEDASED HDAPGLTP-- bmy_19843T0/1-401 WLIQSVSVLL PSAVFSVYVL HKGAELAARG SRWLGDDSED HDGPELTP-- BACU013804/1-328 WLIQSVSVLL PSAVFSVYVL HKGAELAARG SRWLGDDSED HDGPELTP-- 201 250 ENSP00000315070/1-370 FGERGGLQVP DFSAGYIIHL LLRTLLEAAF GALHYFLFGF LAPKKFPCTR ENSBTAP00000004748/1-358 -GARRCLTVP DFSSGYVVHL CLRTLTEAAF GALHYLLFGF LVPKRFSCTH bmy_19843T0/1-401 -GARRCLTVP DFSSGYVVHL CLRTLTEAAF GALHYLLFGF LVPKRFSCTH BACU013804/1-328 -GARRCLTVP DFSSGYVVHL CLRTLTEAAF GALHYLLFGF LVPKRFSCTH 251 300 ENSP00000315070/1-370 PPCTGVVDCY VSRPTEKSLL MLFLWAVSAL SFLLGLADLV CSLRRRMRRR ENSBTAP00000004748/1-358 PPCTSVVDCY VSRPTEKSIL MLFVWAMCAL SFLLTVADLV CSVCWKTQGR bmy_19843T0/1-401 PPCTSVVDCY VSRPTEKSIL MLFVWAVCAL SFLLSVADLV CSVRWKTRRR BACU013804/1-328 PPCTSVVDCY VSRPTEKSIL MLFVWAVCAL SFLLSVADLV CSVRWKTRRR 301 350 ENSP00000315070/1-370 PGPPTSPSIR KQSGASGHAE GRRTDEEGGR EEEGAPAPPG ARAGGEGAGS ENSBTAP00000004748/1-358 PGEARRRPCP GARDAAPEGR GAR-EGLGVH EGRGERARTG LGTRGPGAHS bmy_19843T0/1-401 PGGARRRPCQ GAGGAAR--- ----EGHGAH GGRGARARRG LRTGGQGVYS BACU013804/1-328 PGGARRRPCQ GAGGAAR--- ----EGHGAH GGSGARARRG LRTGGQGAYS 351 400 ENSP00000315070/1-370 PRRTSRVSGH TKIPDEDESE VTSSASEKLG RQPRGRPHRE AAQDPRGSGS ENSBTAP00000004748/1-358 PAAESAAPGR LELPGEDESD ALSSASD--- -QPRL----- ARPGAAALGW bmy_19843T0/1-401 PAAEPTEPGH PELPGEDESD ALSSASD--- -QPRG----- AGPGAAAPGW BACU013804/1-328 PAAEPTVPGH PELPGEHESD SLSSASD--- -QPRG----- AGPGAAAPGW 401 450 ENSP00000315070/1-370 EEQPSAAPSR LAAPPSCSSL QPPDPPASSS -GAPHLRARK SEWV ENSBTAP00000004748/1-358 EERPCAPRAQ LSGPDELGRG YPTDTVLSSS RGAPRHRAES WEWM bmy_19843T0/1-401 EERPCAPSAP LPGPS----- ---------- ---------K SEWV BACU013804/1-328 EERPCAPNAP LPGPS----- ---------- ---------K SEWV