KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:42 2014 Check: 00 .. Name: ENSTTRP00000000533/1-289 Len: 359 Check: 7151 Weight: 1.00 Name: ENSP00000255631/1-359 Len: 359 Check: 9282 Weight: 1.00 Name: bmy_16788T0/1-337 Len: 359 Check: 6321 Weight: 1.00 Name: BACU009050/1-357 Len: 359 Check: 6275 Weight: 1.00 Name: ENSBTAP00000004752/1-357 Len: 359 Check: 6533 Weight: 1.00 // 1 50 ENSTTRP00000000533/1-289 ---------- ---------- ---------- ---------- ---------- ENSP00000255631/1-359 MSDEGSRGSR LPLALPPASQ GCSSGGGGGG SSAGGSGNSR PPRNLQGLLQ bmy_16788T0/1-337 MANQGSGSSR LPLALPPASQ GCSS--GGSG SSAGGSGNPP PPRNLQGLLQ BACU009050/1-357 MANQGSGSSR LPLALPPASQ GCSS--GGSG SSAGGSGNPP PPRNLQGLLQ ENSBTAP00000004752/1-357 MANQGSGGSR LPLALPSASQ DCSS--GGSG SSEGGSGHPP PPRNLQGLLQ 51 100 ENSTTRP00000000533/1-289 ---------- ---------- RRQWLQEAMS AAFRGQREEV EQMKNCLRVL ENSP00000255631/1-359 MAITAGSEEP DPPPEPMSEE RRQWLQEAMS AAFRGQREEV EQMKSCLRVL bmy_16788T0/1-337 MAITAGSEEP DPPPEPMSEE RRQWLQEAMS AAFRGQREEV EQMKNCLRVL BACU009050/1-357 MAITAGSEEP DPPPEPMSEE RRQWLQEAMS AAFRGQREEV EQMKNCLRVL ENSBTAP00000004752/1-357 MAITAGSEEP DPPPEPMSEE RRQWLQEAMS AAFRGQREEV EQMKNCLRVL 101 150 ENSTTRP00000000533/1-289 SQPTTPSAGE AELAADQQER EGALELLADL CENMDNAADF CQLSGMHLLV ENSP00000255631/1-359 SQPMPPTAGE AEQAADQQER EGALELLADL CENMDNAADF CQLSGMHLLV bmy_16788T0/1-337 SQPMPPSAGE AELAADQQER ERALELLADL CENMDNAADF CQLSGMHLLV BACU009050/1-357 SQPTPASAGE AELAADQQER EGALELLADL CENMDNAADF CQLSGMHLLV ENSBTAP00000004752/1-357 SQPTPSSAGE AELATDQQER EGALELLADL CENMDNAADF CQLSGMHLLV 151 200 ENSTTRP00000000533/1-289 GRYLEAGPAG LRWRAAQLIG TCSQNVAAIQ EQVLGLGALR KLLRLLDRDP ENSP00000255631/1-359 GRYLEAGAAG LRWRAAQLIG TCSQNVAAIQ EQVLGLGALR KLLRLLDRDA bmy_16788T0/1-337 GRYLEAGPAG LRWRAAQLIG TCSQNVAAIQ EQVLGLGALR KLLRLLDRDP BACU009050/1-357 GRYLETGPAG LRWRAAQLIG TCSQNVAAIQ EQVLGLGALR KLLRLLDRDP ENSBTAP00000004752/1-357 GRYLEAGPAG LRWRAAQLIG TCSQNVAAIQ EQVLGLGALR KLLRLLDRDP 201 250 ENSTTRP00000000533/1-289 CDAVRVKALF AISXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255631/1-359 CDTVRVKALF AISCLVREQE AGLLQFLRLD GFSVLMRAMQ QQVQKLKVKS bmy_16788T0/1-337 CDAVRVKALF AISCLVREQE AGLLQFLRLD GFSVLMRAMQ QQVQKLKVKS BACU009050/1-357 CDAVRVKALF AISCLVREQE AGLLQFLRLD GFSVLMRAMQ QQVQKLKVKS ENSBTAP00000004752/1-357 CDAVRVKALF AISCLVREQE AGLLQFLRLD GFSVLMRAMQ QQVQKLKVKS 251 300 ENSTTRP00000000533/1-289 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000255631/1-359 AFLLQNLLVG HPEHKGTLCS MGMVQQLVAL VRTEHSPFHE HVLGALCSLV bmy_16788T0/1-337 AFLLQNLLVG HPEHKGTLCS MGMVQQLVAL VRTEHSPFHE HVLGALCRCA BACU009050/1-357 AFLLQNLLVG HPEHKGTLCS MGMVQQLVAL VRTEHSPFHE HVLGALCSLV ENSBTAP00000004752/1-357 AFLLQNLLVG HPEHKGTLCA MGMVQQLVAL VRTEHSPFHE HVLGALCSLV 301 350 ENSTTRP00000000533/1-289 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXEELEF CEKLLQTCFS ENSP00000255631/1-359 TDFPQGVREC REPELGLEEL LRHRCQLLQQ HEEYQEELEF CEKLLQTCFS bmy_16788T0/1-337 -----GAQRD RRP-MG---- ---------- AKGFREELEF CEKLLQTCFS BACU009050/1-357 TDFPQGVREG REPELGLEEL LRHRCQLLQQ HEEYQEELEF CEKLLQTCFS ENSBTAP00000004752/1-357 TDFPQGVREC REPELGLEEL LRHRCQLLQQ HEEYQEELEF CEKLLQTCFS 351 400 ENSTTRP00000000533/1-289 TPTDDSMDR ENSP00000255631/1-359 SPADDSMDR bmy_16788T0/1-337 TPTDDIMDR BACU009050/1-357 TPTDDIMDR ENSBTAP00000004752/1-357 TPTDDSMDR