KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:24:44 2014 Check: 00 ..
Name: ENSP00000345917/1-379 Len: 387 Check: 5362 Weight: 1.00
Name: ENSBTAP00000004763/1-382 Len: 387 Check: 9441 Weight: 1.00
Name: ENSTTRP00000012155/1-381 Len: 387 Check: 6789 Weight: 1.00
Name: bmy_20494T0/1-378 Len: 387 Check: 9727 Weight: 1.00
Name: BACU014359/1-378 Len: 387 Check: 518 Weight: 1.00
//
1 50
ENSP00000345917/1-379 MVFFTCNACG ESVKKIQVEK HVSVCRNCEC LSCIDCGKDF WGDDYKNHVK
ENSBTAP00000004763/1-382 MVFFTCNACG ESVKKVQVEK HVALCRNCEC LSCIDCGKDF WGDDYKNHVK
ENSTTRP00000012155/1-381 MVFFTCNACG ESVKKIQVEK HVALCRNCEC LSCIDCGKDF WGDDYKNHVK
bmy_20494T0/1-378 MVFFTCNACG ESVKKIQVEK HVALCRNCEC LSCIDCGKDF WGDDYKNHVK
BACU014359/1-378 MVFFTCNACG ESVKKVQVEK HVALCRNCEC LSCIDCGKDF WGDDYKNHVK
51 100
ENSP00000345917/1-379 CISEDQKYGG KGYEGKTHKG DIKQQAWIQK ISELIKRPNV SPKVRELLEQ
ENSBTAP00000004763/1-382 CISEDQKYGG KGYEGKTHKG DVKQQAWIQK IHELIKRPNV SPKVRELLEQ
ENSTTRP00000012155/1-381 CISENQKYGG KGYEGKTHKG DVKQQAWIQK INELIKRPNV GPKVRELLGQ
bmy_20494T0/1-378 CISEDQKYGG KGYEGKTHKG DIKQQAWIQK INELIKRPSV GPKVRELLGQ
BACU014359/1-378 CISEDQKYGG KGYEGKTHKG DVKQQAWIQK INELIKRPSV GPKVRELLGQ
101 150
ENSP00000345917/1-379 ISAFDNVPRK KAKFQNWMKN SLKVHNESIL DQVWNIFSEA SNSEPVNKEQ
ENSBTAP00000004763/1-382 ISGFDNVPRK RAKFQNWMKN SLKVHNESIL EQVWNIFSEA SSSEPVGKGP
ENSTTRP00000012155/1-381 ISGFDNVPRK RAKFQNWMKN SLKVHNESLL EQVWNIFSEA SSNEPVSKGQ
bmy_20494T0/1-378 ISGFDNVPRK RAKFQNWMKN SLKVHNESIL EQVWNIFSEA SSNEPVSKGQ
BACU014359/1-378 ISGFDNVPRK RAKFQNWMKN SLKVHNESIL EQVWNIFSEA SSNEPVSKGQ
151 200
ENSP00000345917/1-379 DQRPLHPVAN PHAEISTKVP ASKVKDAVEQ QGEVKKNKRE RKEERQKKRK
ENSBTAP00000004763/1-382 DQQPPEPVTK PCAENNADVP SSKANSSTEE PAEAKKNKRE RKAERQKNTK
ENSTTRP00000012155/1-381 DQQPLEQAAK PCAENNAKVA SSKANDSVEE PAETKKNKRE RKEERQKKRK
bmy_20494T0/1-378 DQQPLEQVAK PCAENNAKVA SSKANDSMEE PAETKKNKRE RKEERQKKRK
BACU014359/1-378 DQQPLEQVAK PCAENNAKVA SSKANDSMEE PAETKKNKRE RKEERQKKRK
201 250
ENSP00000345917/1-379 REKKELKLEN HQENSRNQKP KKRKKGQEAD LEAGGEEVPE ANGSAGKRS-
ENSBTAP00000004763/1-382 KEKKELRLEN HQEDAKSQKP KKRKAAQEAE QEAADGS--- -SGTKSQRK-
ENSTTRP00000012155/1-381 KEKKELKLEN HQENSKSQKP KKRKAGQEAE QEAAGEAIFE AASSAGKKSQ
bmy_20494T0/1-378 KEKKEQKLEN HQENSKSQKP KKRKAGQEAE QEA------- -AGKKSQRK-
BACU014359/1-378 KEKKEQKLEN HQENSKSQKP KKRKAGQEAE QEA------- -AGKKSQRK-
251 300
ENSP00000345917/1-379 KKKKQRKDSA S-------EE EAHVGAGKRK RRHSEVETDS KKKKMKLPEH
ENSBTAP00000004763/1-382 KSKAERAQDG AVDGGAKVGE QADAGPGKRK RKHSEVEANS KKKKIKPPEN
ENSTTRP00000012155/1-381 RSKAECTQDG A------GEG ETKTSLGKRK QKHSEVEADS KKKKIKLLGH
bmy_20494T0/1-378 RSKAECTQDG AVDGGAEREG ETKTSLGKRK QKHSEVEADS KKKKIKLPGH
BACU014359/1-378 RSKAERTQDG AVDGGAEREG ETKTSLGKRK RKHSEVEADS KKKKIKLPGH
301 350
ENSP00000345917/1-379 PEGGEPEDDE APAKGKFNWK GTIKAILKQA PDNEITIKKL RKKVLAQYYT
ENSBTAP00000004763/1-382 SEDGEPENHE APAKGKFNWK GTIKAVLKQA PDNEITIKKL RKKVLAQYYA
ENSTTRP00000012155/1-381 SEDGEPENHE ASAKGKFNWK GTIKAVLKQA PDNEITIKKL RKKVLAQYYA
bmy_20494T0/1-378 SENGEPENHE APAKGKFNWK GTIKAVLKQA PDNEITIKKL RKKVLAQYYA
BACU014359/1-378 SENGEPENHE APAKGKFNWK GTIKAVLKRA PDNEITIKKL RKKVLAQYYA
351 400
ENSP00000345917/1-379 VTDEHHRSEE ELLVIFNKKI SKNPTFKLLK DKVKLVK
ENSBTAP00000004763/1-382 VTNEHHKSEE ELLVIFNKKI SKNPTLKLLK DKVKLVK
ENSTTRP00000012155/1-381 VTNEHHKSEE ELLVIFNKKI SKNPTLKLLK DKVKLLK
bmy_20494T0/1-378 VTNEHHKSEE ELLVIFNKKI SKNPSLKLLK DKVKLLK
BACU014359/1-378 VTNEHHKSEE ELLVIFNKKI SKNPTLKLLK DKVKLLK