KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:44 2014 Check: 00 .. Name: ENSP00000338573/1-582 Len: 724 Check: 6085 Weight: 1.00 Name: ENSTTRP00000000831/1-579 Len: 724 Check: 4583 Weight: 1.00 Name: BACU011804/1-718 Len: 724 Check: 8730 Weight: 1.00 Name: ENSBTAP00000004772/1-575 Len: 724 Check: 7688 Weight: 1.00 Name: bmy_19162T0/1-554 Len: 724 Check: 1993 Weight: 1.00 // 1 50 ENSP00000338573/1-582 MMKLRHKNKK PGEGSKGHKK ISWPYPQPAK QNGKKATSKV PSAPHFVHPN ENSTTRP00000000831/1-579 MVKLRHKNKK PGKSSKGCKK VSWFHAQPAK QNGKKAATKV ASAPQFVHSN BACU011804/1-718 ------ENKK PGKSSKGRKK ISWFHTQPAK QNGKKAATKV ASAPQFVHFN ENSBTAP00000004772/1-575 MMKLRHKNKK PGKGSKGCKK -------PAK QNGKKAATKV AYSPQFFHSN bmy_19162T0/1-554 MMKLRHKNKK PGKSSKGRKK ISWFHAQPAK QNGKKAATKV ASAPQFVHSN 51 100 ENSP00000338573/1-582 DHANREAELK KKWVEEMREK QQAAREQERQ KRRTIESYCQ DVLRRQEEFE ENSTTRP00000000831/1-579 DHANREAELK KKRVEEMREK -QAAREQERH -RRTIESYCQ DVLRRQEEFE BACU011804/1-718 DHASREAELK KKRVEDMREK QQAAREQERH RRRTIESYCQ DVLRRQKEFE ENSBTAP00000004772/1-575 DHASREAELK KKRVGEMREK QQAAREQERH RRRTIESYCQ DVLRRQEEFE bmy_19162T0/1-554 DHASREAELK KKRVEDMREK QQAAREQERH RRRTIESYCQ DVLRRQKEFE 101 150 ENSP00000338573/1-582 HKEEVLQELN MFPQLDDEAT RKAYYKEFRK VVEYSDVILE VLDARDPLGC ENSTTRP00000000831/1-579 RKEEVLEELN MFPQLDDEAT RKAYYKEFHK VVEYSDVILE VLDARDPLGC BACU011804/1-718 RKEDVLEELN MFPQLDDEAT RKAYYKEFRK VVEYSDVILE VLDARDPLGC ENSBTAP00000004772/1-575 HKEEVLQELN MFPQLDDEAT RKAYYKEFHK VVEYSDVILE VLDSRDPLGC bmy_19162T0/1-554 ---------- ---------- --------RK VVEYSDVILE VLDARDPLGC 151 200 ENSP00000338573/1-582 RCFQMEEAVL RAQGNKKLVL VLNKIDLVPK EVVEKWLDYL RNELPTVAFK ENSTTRP00000000831/1-579 RCFQMEETVL RAEGNKKLVL VLNKIDLVPK EVVEKWLEYL RNELPIVAFK BACU011804/1-718 RCFQMEETVL QAEGNKKLVL ILNKIDLVPK EVVEKWLEYL RNELPVVAFK ENSBTAP00000004772/1-575 RCFQMEETVL RAEGNKKLVL VLNKIDLVPK EVVEKWLEYL RNELPTVAFK bmy_19162T0/1-554 RCFRMEETVL RAEGNKKLVL ILNKIDLVPK EVVEKWLEYL RNELPVVAFK 201 250 ENSP00000338573/1-582 ASTQHQVKNL NRCSVPVDQA SESLLKSKAC ---------- ---------- ENSTTRP00000000831/1-579 ASTQHQVKNL NRCSVPVDQA SESLLKSK-C ---------- ---------- BACU011804/1-718 ASTQHQVKNL NRCSVPVDQA SESLLKSKAC FGNAFSIVPV DQASESLLKS ENSBTAP00000004772/1-575 ASTQHQVKNL NRCSVPVDQA SESLLKSKAC ---------- ---------- bmy_19162T0/1-554 ASTQHQVKNL NRCSVPVDQA SESLLKSKAC ---------- ---------- 251 300 ENSP00000338573/1-582 ---FGAENLM RVLGNYCRLG EVRTHIRVGV VGLPNVGKSS LINSLKRSRA ENSTTRP00000000831/1-579 ---FGAENLM RVLGNYCRLG EVRTHIRVGV VGLPNVGKSS LINSLKRSRA BACU011804/1-718 KACFGAENLM RVLGNYCRLG EVRTHIRVGV VGLPNVGKSS LINSLKRSRA ENSBTAP00000004772/1-575 ---FGAENLM RVLGNYCRLG EVRTHIRVGV VGLPNVGKSS LINSLKRSRA bmy_19162T0/1-554 ---FGAENLM RVLGNYCRLG EVRTHIRVGV VGLPNVGKSS LINSLKRSRA 301 350 ENSP00000338573/1-582 CSVGAVPGIT KFMQEVYLDK FIRLLDAPGI VPGPNSEVGT ILRNCVHVQK ENSTTRP00000000831/1-579 CSVGAVPGIT KFMQEVYLDK FIRLLDAPGI VPGPNSEVGT ILCNCIHVQK BACU011804/1-718 CSVGAVPGVT KFMQEVYLDK FIRLLDAPGI VPGPNSEVGT ILCNCIRVQK ENSBTAP00000004772/1-575 CSVGAVPGVT KFMQEVYLDK FIRLLDAPGI VPGPNSEVGT ILRNCIHVQK bmy_19162T0/1-554 CSVGAVPGVT KFMQEVYLDK FIRLLDAPGI VPGPNSEVGT ILCNCIHVQK 351 400 ENSP00000338573/1-582 LADPVTPVET ILQRCNLEEI SNYYGVSGFQ TTEHFLTAVA HRLGKKKKGG ENSTTRP00000000831/1-579 LADPVTPVET ILQRCNLEEI SSYYGVSGFQ TTEHFLTAVA HRLGKKKKGG BACU011804/1-718 LADPVTPVET ILQRCNLEEI SSYYGVSGFQ TTEHFLTAVA HRLGKKKKGG ENSBTAP00000004772/1-575 LADPVTPVET ILQRCNLEEI SSYYGVSGFQ TTEHFLTAVA HRLGKKKKGG bmy_19162T0/1-554 LADPVTPVET ILQRCNLEEI SSYYGVSGFQ TTEHFLTAVA HRLGKKKKGG 401 450 ENSP00000338573/1-582 LYSQEQAAKA VLADWVSGKI SF-----YIP PPATHTLPTH L--SAEIVKE ENSTTRP00000000831/1-579 IYSQEQAAKA VLADWVSGKI SF-----YTL PPSTHTLPAH L--SAEIVKE BACU011804/1-718 IYSQEQAAKA VLADWVSAEI VKEMTEVFDI EDTEQANEDT MECNAEIVKE ENSBTAP00000004772/1-575 IYSQEQAAKA VLADWVSGKI SF-----YTL PPSTHTLPTH L--SAEIVKE bmy_19162T0/1-554 IYSQEQAAKA VLADWVSGKI SF-----YTL PPSTHTLPAH L--SAEIVKE 451 500 ENSP00000338573/1-582 MTEVFDIEDT EQANEDTMEC LATGESDELL GDTDPLEMEI KLLHSPMTKI ENSTTRP00000000831/1-579 MTEVFDIEDT EQANEDTMEX XXXXXXXXXX XXXXXXXXXX XXXXXXMVKI BACU011804/1-718 MTEVFDIEDT EQANEDTMEC LATGESDELL GDMDPLEMEI KWLHSPMVKI ENSBTAP00000004772/1-575 MTEVFDIEDT EQANEDTMEC LATGESDELL GDMDPLEMEI KWLHSPMVKI bmy_19162T0/1-554 MTEVFDIEDT EQANEDTMEC LATGESDELL GDMDPLEMEI KWLHSPMVKI 501 550 ENSP00000338573/1-582 ADAIENKTTV YKIGDLTGYC TNPNRHQMGW AKRNVDHRPK SNSMVDVCSV ENSTTRP00000000831/1-579 ADAMENKTTV YKIGDLTGYC TNPNRHQMGW AKRNVDLHPR NNSSVDVCPV BACU011804/1-718 ADAMENKTTV YKIGDLTGYC TNPNRHQMGW AKRNVDLHPR NNSSVDVCPV ENSBTAP00000004772/1-575 ADAMENKTTV YKIGDLTGYC TNPNRHQMGW AKRNVDLHPR NNSMVDVCPV bmy_19162T0/1-554 ADAMENKTTV YKTGDLTGYC TNPNRHQMGW AKRNVDLHPR NNSSVDVCPV 551 600 ENSP00000338573/1-582 DRRSVLQRIM ETDPLQQGQA LASALKNKKK MQKRADKIAS KLSDSMMSAL ENSTTRP00000000831/1-579 DRRPMLQRIM ETDPLQQGQA LASALKNKKK LQKRTDKLAS KLSDSMMSAL BACU011804/1-718 DRRPMLQRIM ETDPLQQGQA LASALKNKKK LQKRTDKLAS KLSDSMMSAL ENSBTAP00000004772/1-575 DRRPVLQRIM ETDPLQQGQA LASALKKKKK IQKRADKLAS KLSDSMMSAL bmy_19162T0/1-554 DRRPMLQRIM ETDPLQQGQA LASALKNKKK LQKRTDKLAS KLSDSMMSAL 601 650 ENSP00000338573/1-582 DLSGNADDGV GD-------- ---------- ---------- ---------- ENSTTRP00000000831/1-579 DLSGNADDSA GD-------- ---------- ---------- ---------- BACU011804/1-718 DLSGNADDSA GDCRQGASFA NQWQIGDLTG YCTNPNRHQM GWAKRNVDLH ENSBTAP00000004772/1-575 DLSGNADDSA GD-------- ---------- ---------- ---------- bmy_19162T0/1-554 DLSGNADDSA GD-------- ---------- ---------- ---------- 651 700 ENSP00000338573/1-582 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000831/1-579 ---------- ---------- ---------- ---------- ---------- BACU011804/1-718 PRNNSSVDVC PVDRRPMLQR IMETDPLQQG QALASALKNK KKLQKRTDKL ENSBTAP00000004772/1-575 ---------- ---------- ---------- ---------- ---------- bmy_19162T0/1-554 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000338573/1-582 ---------- ---------- ---- ENSTTRP00000000831/1-579 ---------- ---------- ---- BACU011804/1-718 ASKLSDSMMS ALDLSGNADD SAGD ENSBTAP00000004772/1-575 ---------- ---------- ---- bmy_19162T0/1-554 ---------- ---------- ----