KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:46 2014 Check: 00 .. Name: bmy_15058T0/1-671 Len: 1099 Check: 9234 Weight: 1.00 Name: ENSP00000370047/1-1099 Len: 1099 Check: 7196 Weight: 1.00 Name: ENSBTAP00000004780/1-878 Len: 1099 Check: 6672 Weight: 1.00 Name: BACU006594/1-864 Len: 1099 Check: 2713 Weight: 1.00 Name: ENSTTRP00000012973/1-1096 Len: 1099 Check: 1646 Weight: 1.00 // 1 50 bmy_15058T0/1-671 ---------- ---------- ---------- ---------- ---------- ENSP00000370047/1-1099 MAHLGPTPPP HSLNYKSEDR LSEQDWPAYF KVPCCGVDTS QIESEEAEVD ENSBTAP00000004780/1-878 ---------- ---------- ---------- ---------- ---------- BACU006594/1-864 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012973/1-1096 ---ACLAPTP NGPSHKSEDR LNEQGGQAAF RIPCCGVDAA QVESKEAEVD 51 100 bmy_15058T0/1-671 ---------- ---------- ---------- ---------- ---------- ENSP00000370047/1-1099 VRERETQRDR EPKRARDLTL RDSCTDNSMQ FGTRTTTAEP GFMGTWQNAD ENSBTAP00000004780/1-878 ---------- ---------- ---------- ---------- ---------- BACU006594/1-864 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012973/1-1096 VRERETQRDR EPKRARDLTL RDCCTDNSMQ FGTRTTPAEP GFMGTWQNAD 101 150 bmy_15058T0/1-671 ---------- ---------- ---------- ---------- ---------- ENSP00000370047/1-1099 TNLLFRMSQQ AIRCTLVNCT CECFQPGKIN LRTCDQCKHG WVAHALDKLS ENSBTAP00000004780/1-878 ---------- ---------- ---------- ---------- ---------- BACU006594/1-864 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012973/1-1096 TNLLFRMSQQ AIRCTLVNCT CECFQPGKIN LRTCDQCKHG WVAHALDKLS 151 200 bmy_15058T0/1-671 ---------- ---------- ---------- ---------- ---------- ENSP00000370047/1-1099 TQHLYHPTQV EIVQSNVVFD ISSLMLYGTQ AVPVRLKILL DRLFSVLKQE ENSBTAP00000004780/1-878 ---------- ---------- ---------- ---------- ---------- BACU006594/1-864 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012973/1-1096 TQHLYHPTQV EIVQSNVVFD ISSLMLYGTQ AVPVRLKILL DRLFSVLKQE 201 250 bmy_15058T0/1-671 ---------- ---------- ---------- -----MSREE EIITLQQFLR ENSP00000370047/1-1099 EVLHILHGLG WTLRDYVRGY ILQDAAGKVL DRWAIMSREE EIITLQQFLR ENSBTAP00000004780/1-878 ---------- ---------- -LQDAAGKVL DRWAIMSREE EIITLQQFLR BACU006594/1-864 ---------- ---------- ---------- -----MSREE EIITLQQFLR ENSTTRP00000012973/1-1096 EVLHILHGLG WTLRDYVRGY ILQDAAGKVL DRWAIMSREE EIITLQQFLR 251 300 bmy_15058T0/1-671 FGETKSIVEL MAIQEKEGQA VAVPSSKTDS DIRTFIESNN RTRSPSLLAH ENSP00000370047/1-1099 FGETKSIVEL MAIQEKEGQA VAVPSSKTDS DIRTFIESNN RTRSPSLLAH ENSBTAP00000004780/1-878 FGETKSIVEL MAIQEKEGQA VAVPSSKTDS DIRTFIESNN RTRSPSLLAH BACU006594/1-864 FGETKSIVEL MAIQEKEGQA VAVPSSKTDS DIRTFIESNN RTRSPSLLAH ENSTTRP00000012973/1-1096 FGETKSIVEL MAIQEKEGQA VAVPSSKTDS DIRTFIESNN RTRSPSLLAH 301 350 bmy_15058T0/1-671 LENSNPSSIH HFENIPNSLA FLLPFQYINP VSAPLLGLPP NGLLLEQPGL ENSP00000370047/1-1099 LENSNPSSIH HFENIPNSLA FLLPFQYINP VSAPLLGLPP NGLLLEQPGL ENSBTAP00000004780/1-878 LENSNPSSIH HFENIPNSLA FLLPFQYINP VSAPLLGLPP NGLLLEQPGL BACU006594/1-864 LENSNPSSIH HFENIPNSLA FLLPFQYINP VSAPLLGLPP NGLLLEQPGL ENSTTRP00000012973/1-1096 LENSNPSSIH HFENIPNSLA FLLPFQYINP VSAPLLGLPP NGLLLEQPGL 351 400 bmy_15058T0/1-671 RLREPSLSTQ NEYNESSESE VSPTPYKNDQ TPNRNALTSI TNVEPKTEPA ENSP00000370047/1-1099 RLREPSLSTQ NEYNESSESE VSPTPYKNDQ TPNRNALTSI TNVEPKTEPA ENSBTAP00000004780/1-878 RLREPSLSTQ NEYNESSESE VSPTPYKNDQ TPNRNALTSI TNVEPKTEPA BACU006594/1-864 RLREPSLSTQ NEYNESSESE VSPTPYKNDQ TPNRNALTSI TNVEPKTEPA ENSTTRP00000012973/1-1096 RLREPSLSTQ NEYNESSESE VSPTPYKNDQ TPNRNALTSI TNVEPKTEPA 401 450 bmy_15058T0/1-671 CVSPIQNSAP VSDLSKTEHP KSSFRIHRMR RMGSASRKGR VFCNACGKTF ENSP00000370047/1-1099 CVSPIQNSAP VSDLTKTEHP KSSFRIHRMR RMGSASRKGR VFCNACGKTF ENSBTAP00000004780/1-878 CVSPIQNSAP VSDLSKTEHP KSSFRIHRMR RMGSASRKGR VFCNACGKTF BACU006594/1-864 CVSPIQNSAP VSDLSKTEHP KSSFRIHRMR RMGSASRKGR VFCNACGKTF ENSTTRP00000012973/1-1096 CVSPIQNSAP VSDLSKTEHP KSSFRIHRMR RMGSASRKGR VFCNACGKTF 451 500 bmy_15058T0/1-671 YDKGTLKIHY NAVHLKIKHR CTIEGCNMVF SSLRSRNRHS ANPNPRLHMP ENSP00000370047/1-1099 YDKGTLKIHY NAVHLKIKHR CTIEGCNMVF SSLRSRNRHS ANPNPRLHMP ENSBTAP00000004780/1-878 YDKGTLKIHY NAVHLKIKHR CTIEGCNMVF SSLRSRNRHS ANPNPRLHMP BACU006594/1-864 YDKGTLKIHY NAVHLKIKHR CTIEGCNMVF SSLRSRNRHS ANPNPRLHMP ENSTTRP00000012973/1-1096 YDKGTLKIHY NAVHLKIKHR CTIEGCNMVF SSLRSRNRHS ANPNPRLHMP 501 550 bmy_15058T0/1-671 MLRNNRDKDL IRATSGAATP VIASTKSNLT LTSPGRPPMG FTTPPLDPVL ENSP00000370047/1-1099 MLRNNRDKDL IRATSGAATP VIASTKSNLA LTSPGRPPMG FTTPPLDPVL ENSBTAP00000004780/1-878 MLRNNRDKDL IRATSGAATP VIASTKSNLT LTSPGRPPMG FTTPPLDPVL BACU006594/1-864 MLRNNRDKDL IRATSGAATP VIASTKSNLT LTSPGRPPMG FTTPPLDPVL ENSTTRP00000012973/1-1096 MLRNNRDKDL IRATSGAATP VIASTKSNLT LTSPGRPPMG FTTPPLDPVL 551 600 bmy_15058T0/1-671 QNPLPSQLVF SGLKTVQPVP PFYRSLLTPG EMVSPPTSLP TSPIIPTSGT ENSP00000370047/1-1099 QNPLPSQLVF SGLKTVQPVP PFYRSLLTPG EMVSPPTSLP TSPIIPTSGT ENSBTAP00000004780/1-878 QNPLPSQLVF SGLKTVQPVP PFYRSLLTPG EMVSPPTSLP TSPIIPTSGT BACU006594/1-864 QNPLPSQLVF SGLKTVQPVP PFYRSLLTPG EMVSPPTSLP TSPIIPTSGT ENSTTRP00000012973/1-1096 QNPLPSQLVF SGLKTVQPVP PFYRSLLTPG EMVSPPTSLP TSPIIPTSGT 601 650 bmy_15058T0/1-671 IEQLPPLPSE PAAPVVMMAT HEPSADLAPK KKPRKSSMPV KIEKEIIDTA ENSP00000370047/1-1099 IEQHPPPPSE PVVPAVMMAT HEPSADLAPK KKPRKSSMPV KIEKEIIDTA ENSBTAP00000004780/1-878 IEQHPPPPSE PAAPVVMMAT HEPSADLAPK KKPRKSSMPV KIEKEIIDTA BACU006594/1-864 IEQLPPLPSE PAAPVVMMAT HEPSADLVPK KKPRKSSMPV KIEKEIIDTA ENSTTRP00000012973/1-1096 VEQLPPLPSE PAAPVVMMAT HEPSADLAPK KKPRKSSMPV KIEKEIIDTA 651 700 bmy_15058T0/1-671 DEFDDEDDDP NDGGAVVNDG SHDNHCHSQE EMSPGMSVKD FSKHSRTRCI ENSP00000370047/1-1099 DEFDDEDDDP NDGGAVVNDM SHDNHCHSQE EMSPGMSVKD FSKHNRTRCI ENSBTAP00000004780/1-878 DEFDDEDDDP NDSGAVVNDG SHDNHCHSQE EMSPGMSVKD FSKHSRTRCL BACU006594/1-864 DEFDDEDDDP NDGGAVVNDG SHDNHCHSQE EMSPGMSVKD FSKHSRTRCI ENSTTRP00000012973/1-1096 DEFDDEDDDP NDGGAVVNDG SHDNHCHSQE EMSPGMSVKD FSKHSRTRCI 701 750 bmy_15058T0/1-671 SRTEIRRADS MTSEDQEPER DYENESESSE PKLGEESMEG DEHMHGEVSE ENSP00000370047/1-1099 SRTEIRRADS MTSEDQEPER DYENESESSE PKLGEESMEG DEHIHSEVSE ENSBTAP00000004780/1-878 SRTEIRRADS MTSEDQEPER DYENESESSE PKLGEESMEG DEHMHGEVSE BACU006594/1-864 SRTEIRRADS MTSEDQEPER DYENESESSE PKLGEESMEG DEHMHGEVSE ENSTTRP00000012973/1-1096 SRTEIRRADS MTSEDQEPER DYENESESSE PKLGEESMEG DEHMHGEVSE 751 800 bmy_15058T0/1-671 KVLMNSERPD ENHSEPSHQD VIKVKEEFTD PTYDMFYMSQ YGLYN-GGAS ENSP00000370047/1-1099 KVLMNSERPD ENHSEPSHQD VIKVKEEFTD PTYDMFYMSQ YGLYNGGGAS ENSBTAP00000004780/1-878 KVLMNSERPD ENHSEPSHQD VIKVKEEFTD PTYDMFYMSQ YGLYNGGGAS BACU006594/1-864 KVLMNSERPD ENHSEPSHQD VIKVKEEFTD PTYDMFYMSQ YGLYNGGGAS ENSTTRP00000012973/1-1096 KVLVNSERPD ENHSEPSHQD VIKVKEEFTD PTYDMFYMSQ YGLYNGGGAS 801 850 bmy_15058T0/1-671 MAALHESFTS SLNYGSPQKF SPEGDLCSSP DPKICYVCKK SFKSSYSVKL ENSP00000370047/1-1099 MAALHESFTS SLNYGSPQKF SPEGDLCSSP DPKICYVCKK SFKSSYSVKL ENSBTAP00000004780/1-878 MAALHESFTS SLNYGSPQKF SPEGDLCSSP DPKICYVCKK SFKSSYSVKL BACU006594/1-864 MAALHESFTS SLNYGSPQKF SPEGDLCSSP DPKICYVCKK SFKSSYSVKL ENSTTRP00000012973/1-1096 MAALHESFAS SLNYGSPQKF SPEGDLCSSP DPKICYVCKK SFKSSYSVKL 851 900 bmy_15058T0/1-671 HYRNVHLKEM HVCTVAGCNA AFPSRRSRDR ---SVNLHWL LL-------- ENSP00000370047/1-1099 HYRNVHLKEM HVCTVAGCNA AFPSRRSRDR HSANINLHRK LLTKELDDMG ENSBTAP00000004780/1-878 HYRNVHLKEM HVCTVAGCNA AFPSRRSRDR HSANINLHRK LLTKELDDMG BACU006594/1-864 HYRNVHLKEM HVCTVAGCNA AFPSRRSRDR HSANINLHRK LLTKELDDMG ENSTTRP00000012973/1-1096 HYRNVHLKEM HVCTVAGCNA AFPSRRSRDR HSANINLHRK LLTKELDDMG 901 950 bmy_15058T0/1-671 ---------- ---------- ------LGVE ---------- ---------- ENSP00000370047/1-1099 LDSSQPSLSK DLRDEFLVKI YGAQHPMGLD VREDASSPAG TEDSHLNGYG ENSBTAP00000004780/1-878 LDSSQPSLSK DLRDEFLMKI YGAQHPLGLD IREDASSPAG TEDSHLNGYG BACU006594/1-864 LDSSQPSLSK DLRDEFLMKI YGAQHPLGLD VREDASSPAG TEDSHLNGYG ENSTTRP00000012973/1-1096 LDSSQPSLSK DLRDEFLMKI YGAQHPLGLD VREDASSPAG TEDSHLNGYG 951 1000 bmy_15058T0/1-671 ---------- ---------- ---------- ---------- ----GASHGG ENSP00000370047/1-1099 RGMAEDYMVL DLSTTSSLQS SSSIHSSRES DAGSDEGILL DDIDGASDSG ENSBTAP00000004780/1-878 RGMAEDYMVL DLSTTSSLQS SSSIHSSRES DAGSDEGILL DDIDGASDSG BACU006594/1-864 RGMAEDYMVL DLSTTSSLQS SSSIHSSRES DAGSDEGILL DDIDGASDSG ENSTTRP00000012973/1-1096 RGMAEDYMVL DLSTTSSLQS SSSIHSSRES DAGSDEGILL DDIDGASDSG 1001 1050 bmy_15058T0/1-671 LETLKNPA-- ---------- ---------- ---------- ---------- ENSP00000370047/1-1099 ESAHKAEAPA LPGSLGAEVS GSLMFSSLSG SNGGIMCNIC HKMYSNKGTL ENSBTAP00000004780/1-878 ESAHKAEAPT LPGGLGADVS GSLMFNSLSG STGGIMCTIC HKMYSNKGTL BACU006594/1-864 ESAHKAEVPT LAGSLGADVS GSLMFNSLSG SNGGIMCNIC HKMYSNKGTL ENSTTRP00000012973/1-1096 ESAHKAEVPT LAGSLGADVS GSLMFNSLSG SNGGIMCNIC HKMYSNKGTL 1051 1100 bmy_15058T0/1-671 ---------- ---------- ---------- ---------- --------- ENSP00000370047/1-1099 RVHYKTVHLR EMHKCKVPGC NMMFSSVRSR NRHSQNPNLH KNIPFTSVD ENSBTAP00000004780/1-878 RVHYKTVHLR EMHKCKVPGC NMMFSSVRSR NRHSQNPNLH KNIPFTAVD BACU006594/1-864 RVHYKTVHLR EMHKCKVPGC NMMFSSVRSR NRHSQNPNLH KNIPFTSVD ENSTTRP00000012973/1-1096 RVHYKTVHLR EMHKCKVPGC NMMFSSVRSR NRHSQNPNLH KNIPFTSVD