KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:49 2014 Check: 00 .. Name: ENSP00000303686/1-410 Len: 432 Check: 8824 Weight: 1.00 Name: ENSTTRP00000012498/1-398 Len: 432 Check: 1625 Weight: 1.00 Name: ENSBTAP00000004808/1-409 Len: 432 Check: 8495 Weight: 1.00 Name: bmy_07132T0/1-424 Len: 432 Check: 5418 Weight: 1.00 Name: BACU016768/1-371 Len: 432 Check: 6125 Weight: 1.00 // 1 50 ENSP00000303686/1-410 METSSPRPPR PSSNPGLSLD ARLGVDTRLW AKVLFTALYA LIWALGAAGN ENSTTRP00000012498/1-398 METSSPRPPG PSPGPALGLD ARLGVDTRLW AKVLFTALYS LIFALGTAGN ENSBTAP00000004808/1-409 METGSPRAPG PSPGPALSLD ARLGVDTHLW AKVLFTALYS LIFALGTAGN bmy_07132T0/1-424 METSSPRPPG PSPGPAPGLD ARLGVDTRLW AKVLFSALYS LIFALGTAGN BACU016768/1-371 METSSPRPPG PSPGPAPGLD ARLGVDTRLW AKVLFSALYS LIFALGTAGN 51 100 ENSP00000303686/1-410 ALSAHVVLKA RAGRAGRLRH HVLSLALAGL LLLLVGVPVE LYSFVWFHYP ENSTTRP00000012498/1-398 ALSAHVVLKA RAGPPGRLRC HVLSLALSAL LLLLVGVPVE LYNFVWFHYP ENSBTAP00000004808/1-409 ALSVHVVLKA RAGPPGRLRC HVLSLALSAL LLLLVGMPME LYNFVWFHYP bmy_07132T0/1-424 ALSVRVVLKA RAGPPGRLRC HVLSLALSAL LLLLVGVPME LYNFVWFHYP BACU016768/1-371 ALSVHVVLKA RAGPPGRLPC HLLSLALSAL LLLLVGVPME LYNFVWFHYP 101 150 ENSP00000303686/1-410 WVFGDLGCRG YYFVHELCAY ATVLSVAGLS AERCLAVCQP LRARSLLTPR ENSTTRP00000012498/1-398 WVFSDLSCRA YYFVRELCAS ATMLSVLSLS AERCLTVCPS LRARFLLTPG ENSBTAP00000004808/1-409 WVFGDLGCRA YYFVRELCAY ATVLSVASLS AERCLAVCQP LRARSLLTPR bmy_07132T0/1-424 WVFGDLGCRA YYFVRELCAC AMVLSVASLS AERCLAVCQP LRARSLLTPR BACU016768/1-371 WVFGDLGCRA YYFVRELCAY AMVLSVASLS AERCLAVCQP LRARSLLTPR 151 200 ENSP00000303686/1-410 RTRWLVALSW AASLGLALPM AVIMGQKHEL ETADGEPEPA SRVCTVLVSR ENSTTRP00000012498/1-398 MTRRLL-LSL VTSLG-ALPM EILL--RRNI VETAGEPRLA -RVCTVLVSR ENSBTAP00000004808/1-409 KTRRLLSVVW AASLGLALPM AVIMGQKHEL ETAGGEPEPA SRVCTVLVSR bmy_07132T0/1-424 RTRRLLSLVW AASLGLALPM AIVMGQKHEL ETAGGQPEPA SRVCTVLVSR BACU016768/1-371 RTRRLLSLVW AAWLGLALPM AIVMGQKHEL ETAGGQPEPA SRVCTVLVSR 201 250 ENSP00000303686/1-410 TALQVFIQVN VLVSFVLPLA LTAFLNGVTV SHLLALCSQV PSTSTPGSST ENSTTRP00000012498/1-398 TTLQVFIQVN VLASFVLPLA LTAFLSGVTV SHLEALCSQG PSPSATGSSA ENSBTAP00000004808/1-409 TTLQVFVQVN VLVSFVLPLA LTAFLNGVTV SHLAALCSQV PSPPAAGSSA bmy_07132T0/1-424 SSLQVFIQVN VLVSFVLPLA LTAFLSGVTV SHLEALCSQR PSPSAPGSSA BACU016768/1-371 TTLQVFIQ-- --RGHCEPPG ------GPVL PEAIPFCPRQ LCPQPPEAN- 251 300 ENSP00000303686/1-410 PSRLELLSEE GLLSFIVWKK TFIQGGQVSL --VRHKDVRR IRSL----QR ENSTTRP00000012498/1-398 PSHLKLMSEE --------RR TLALGGQAAL --VRHKDSRR IRGL----QR ENSBTAP00000004808/1-409 PSRLELMSED --------RK TLALGDQAAL --VRHKDSRR IRGL----RR bmy_07132T0/1-424 PSHLKLMSEE --------RR TLALGGQAAL EQVQGKCSRH LGQLPPQRRR BACU016768/1-371 ---------- ---------- ---------- --ERGEEDTG PGRP----GR 301 350 ENSP00000303686/1-410 SVQVL----- -----RAIVV MYVICWLPYH ARRLMYCYVP DDAWTDPLYN ENSTTRP00000012498/1-398 SIQVL----- -----RAIVA VYVVCWMPYH ARRLMYCYVP DNGWTDKLYD ENSBTAP00000004808/1-409 SIQVL----- ---RTGAIVA VYVVCWMPYH VRRLMYCYVP DERWTDKLYD bmy_07132T0/1-424 NCYVFPVCLS LPGPAGAILA VYVVCWMPYH ARRLMYCYVP DNGWTDKLYD BACU016768/1-371 P--------- -----GAILA VYVVCWMPYH ARRLMYCYVP DNGWTDKLYD 351 400 ENSP00000303686/1-410 FYHYFYMVTN TLFYVSSAVT PLLYNAVSSS FRKLFLEAVS SLCGEHHPMK ENSTTRP00000012498/1-398 FYHYFYMVTN TLFYVSSAVT PVLYNAVSSS FRKLFLEALS SLCREHHPTE ENSBTAP00000004808/1-409 FYHYFYMVTN TLFYVSSAVT PVLYNAVSSS FRKLFLEALG SLCREHHPME bmy_07132T0/1-424 FYHYFYLVTN TLFYVSSAVT PVLYNAVSSS FRKLFLEALS SLCREHQPME BACU016768/1-371 FYHYFYLVTN TLFYVSSAVT PVLYNAVSSS FRKLFLEALS SLCREHQPMK 401 450 ENSP00000303686/1-410 RLPPKPQSPT LMDTASG-FG DP--PETRT- -- ENSTTRP00000012498/1-398 PFPPGPRSPV LVDTASG-PG AP--PGILAW -- ENSBTAP00000004808/1-409 SFPPGTPEPR PSGLSLQLWG SPRTPSLDEI E- bmy_07132T0/1-424 PFPPGAPEPR PSGHGIRLWG SPRNPGLDEI EE BACU016768/1-371 PFPPGAPEPR LSGHSLRLWG SPRNPGLDEI EE