KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:52 2014 Check: 00 .. Name: ENSTTRP00000016231/1-689 Len: 784 Check: 8044 Weight: 1.00 Name: BACU007381/1-715 Len: 784 Check: 7318 Weight: 1.00 Name: ENSBTAP00000004831/1-767 Len: 784 Check: 6099 Weight: 1.00 Name: bmy_18132T0/1-638 Len: 784 Check: 6341 Weight: 1.00 Name: ENSP00000306881/1-765 Len: 784 Check: 2195 Weight: 1.00 // 1 50 ENSTTRP00000016231/1-689 ---------- ---------- ---------- ---------- ---------- BACU007381/1-715 ---------- ---------- ---MAPGRGD RSAMAHPTLA LLFQQVPRPS ENSBTAP00000004831/1-767 MTTYLEFIQQ NEERDGVRFS WNVWPSSRLE ATRMVVPVAA LFTPLKERPD bmy_18132T0/1-638 MTTYLEFIQQ NEERDGVRFS WNVWPSSRLE ATRMVVPVAA LFTPLKERPD ENSP00000306881/1-765 MTTYLEFIQQ NEERDGVRFS WNVWPSSRLE ATRMVVPVAA LFTPLKERPD 51 100 ENSTTRP00000016231/1-689 ---------- ---------- ----QVDYRA KLWACNFCYQ RXXFPPTYAG BACU007381/1-715 -PPL------ --------LS TPASQVDYRA KLWACNFCYQ RNQ------- ENSBTAP00000004831/1-767 LPPIQYEPVL CSRTTCRAVL NPLCQVDYRA KLWACNFCYQ RNQFPPTYAG bmy_18132T0/1-638 LPPIQYEPVL CSRTTCRAVL NPLCQVDYRA KLWACNFCYQ RNQFPPTYAG ENSP00000306881/1-765 LPPIQYEPVL CSRTTCRAVL NPLCQVDYRA KLWACNFCYQ RNQFPPSYAG 101 150 ENSTTRP00000016231/1-689 ISELNQPAEL LPQFSSIEYV VLRGPQMPLI FLYVVDTCME DEDLQALKES BACU007381/1-715 ---------- ---------- --RGPQMPLI FLYVVDTCME DEDLQALKES ENSBTAP00000004831/1-767 ISELNQPAEL LPQFSSIEYV VLRGPQMPLI FLYVVDTCME DEDLQALKES bmy_18132T0/1-638 ISELNQPAEL LPQFSSIEYV VLI------- --YI------ ---------- ENSP00000306881/1-765 ISELNQPAEL LPQFSSIEYV VLRGPQMPLI FLYVVDTCME DEDLQALKES 151 200 ENSTTRP00000016231/1-689 MQMSLSLLPP TALVGLITFG RMVQVHELGC EGISKSYVFR GTKDLSAKQL BACU007381/1-715 MQMSLSLLPP TALVGLITFG RMVQVHELGC EGISKSYVFR GTKDLSAKQL ENSBTAP00000004831/1-767 MQMSLSLLPP TALVGLITFG RMVQVHELGC EGISKSYVFR GTKDLSAKQL bmy_18132T0/1-638 ---------- ---------- ---------- ---------- ---------- ENSP00000306881/1-765 MQMSLSLLPP TALVGLITFG RMVQVHELGC EGISKSYVFR GTKDLSAKQL 201 250 ENSTTRP00000016231/1-689 QEMLGLSKVP VTQATRGPQV QQPPPSNRFL QPVQKIDMNL TDLLGELQRD BACU007381/1-715 QEMLGLSKVP VTQATRGPQV QQPPPSNRFL QPVQKIDMNL TDLLGELQRD ENSBTAP00000004831/1-767 QEMLGLSKVP VTQATRGPQV QQPPPSNRFL QPVQKIDMNL TDLLGELQRD bmy_18132T0/1-638 ---------- ---------- -----SIRFL QPVQKIDMNL TDLLGELQRD ENSP00000306881/1-765 QEMLGLSKVP LTQATRGPQV QQPPPSNRFL QPVQKIDMNL TDLLGELQRD 251 300 ENSTTRP00000016231/1-689 PWPVPQ---- ---------- ---GKRPLRS SGVALSIAVG LLECTFPNTG BACU007381/1-715 PWPVPQGXXX XXXXXXXXXX XXXGKRPLRS SGVALSIAVG LLECTFPNTG ENSBTAP00000004831/1-767 PWPVPQ---- ---------- ---GKRPLRS SGVALSIAVG LLECTFPNTG bmy_18132T0/1-638 PWPVPQ---- ---------- ---GRRPLRS SGVALSIAVG LLECTFPNTG ENSP00000306881/1-765 PWPVPQ---- ---------- ---GKRPLRS SGVALSIAVG LLECTFPNTG 301 350 ENSTTRP00000016231/1-689 ARIMMFIGGP ATQGPGMVVG DELKTPIRSW HDIEKDNAKY VKKGTKHFEA BACU007381/1-715 ARIMMFIGGP ATQGPGMVVG DELKTPIRSW HDIEKDNAKY VKKGTKHFEA ENSBTAP00000004831/1-767 ARIMMFIGGP ATQGPGMVVG DELKTPIRSW HDIEKDNAKY VKKGTKHFEA bmy_18132T0/1-638 ARIMMFIGGP ATQGPGMVVG DELKTPIRSW HDIEKDNAKY VKKGTKHFEA ENSP00000306881/1-765 ARIMMFIGGP ATQGPGMVVG DELKTPIRSW HDIDKDNAKY VKKGTKHFEA 351 400 ENSTTRP00000016231/1-689 LANRAATTGH VIDIYACALD QTGLLEMKCC PNLTGGYMVM GDSFNTSLFK BACU007381/1-715 LANRAATTGH VIDIYACALD QTGLLEMKCC PNLTGGYMVM GDSFNTSLFK ENSBTAP00000004831/1-767 LANRAATTGH VIDIYACALD QTGLLEMKCC PNLTGGYMVM GDSFNTSLFK bmy_18132T0/1-638 LANRAATTGH VIDIYACALD QTGLLEMKCC PNLTGGYMVM GDSFNTSLFK ENSP00000306881/1-765 LANRAATTGH VIDIYACALD QTGLLEMKCC PNLTGGYMVM GDSFNTSLFK 401 450 ENSTTRP00000016231/1-689 QTFQRVFTKD MHGQFKMGFG GTLEIKTSRE IKISGAIGPC VSLNSKGPCV BACU007381/1-715 QTFQRVFTKD MHGQFKMGFG GTLEIKTSRE IKISGAIGPC VSLNSKGPCV ENSBTAP00000004831/1-767 QTFQRVFTKD MHGQFKMGFG GTLEIKTSRE IKISGAIGPC VSLNSKGPCV bmy_18132T0/1-638 QTFQRVFTKD MHGQFKMGFG GTLEIK---- ---------- ---------- ENSP00000306881/1-765 QTFQRVFTKD MHGQFKMGFG GTLEIKTSRE IKISGAIGPC VSLNSKGPCV 451 500 ENSTTRP00000016231/1-689 SENEIGTGGT CQWKICGLSP TTTLAIYFEV VNQHNAPIPQ GGRGAIQFVT BACU007381/1-715 SENEIGTGGT CQWKICGLSP TTTLAIYFEV VNQHNAPIPQ GGRGAIQFVT ENSBTAP00000004831/1-767 SENEIGTGGT CQWKICGLSP TTTLAIYFEV VNQHNAPIPQ GGRGAIQFVT bmy_18132T0/1-638 ---EIGTGGT CQWKICGLSP TTTLAVYFEV VNQHNAPIPQ GGRGAIQFVT ENSP00000306881/1-765 SENEIGTGGT CQWKICGLSP TTTLAIYFEV VNQHNAPIPQ GGRGAIQFVT 501 550 ENSTTRP00000016231/1-689 QYQHSSGQRR IRVTTIARNW ADAQTQIQNI AASFDQEAAA ILMARLAIYR BACU007381/1-715 QYQHSSGQRR IRVTTIARNW ADAQTQIQNI AASFDQEAAA ILMARLAIYR ENSBTAP00000004831/1-767 QYQHSSGQRR IRVTTIARNW ADAQTQIQNI AASFDQEAAA ILMARLAIYR bmy_18132T0/1-638 QYQHSSGQRR IRVTTIARNW ADAQTQIQNI AASFDQEAAA ILMARLAIYR ENSP00000306881/1-765 QYQHSSGQRR IRVTTIARNW ADAQTQIQNI AASFDQEAAA ILMARLAIYR 551 600 ENSTTRP00000016231/1-689 AETEEGPDVL RWLDRQLIRL XXXXXXXXXX XXXXXXXXXX XXXXXXFMFH BACU007381/1-715 AETEEGPDVL RWLDRQLIRL CQKFGEYHKD DPSSFRFSET FSLYPQFMFH ENSBTAP00000004831/1-767 AETEEGPDVL RWLDRQLIRL CQKFGEYHKD DPSSFRFSET FSLYPQFMFH bmy_18132T0/1-638 AETEEGPDVL RWLDRQLIRL CQKFGEYHKD DPSSFRFSET FSLYPQFMFH ENSP00000306881/1-765 AETEEGPDVL RWLDRQLIRL CQKFGEYHKD DPSSFRFSET FSLYPQFMFH 601 650 ENSTTRP00000016231/1-689 LRRSPFLQVF NNSPDESSYY RHHFMRQDLT QSLIMIQPIL YAYSFSGPPE BACU007381/1-715 LRRSPFLQVF NNSPDESSYY RHHFMRQDLT QSLIMIQPIL YAYSFSGPPE ENSBTAP00000004831/1-767 LRRSPFLQVF NNSPDESSYY RHHFMRQDLT QSLIMIQPIL YAYSFSGPPE bmy_18132T0/1-638 LRRSPFLQVF NNSPDESSYY RHHFMRQDLT QSLIMIQPIL YAYSFSGPPE ENSP00000306881/1-765 LRRSSFLQVF NNSPDESSYY RHHFMRQDLT QSLIMIQPIL YAYSFSGPPE 651 700 ENSTTRP00000016231/1-689 PVLLDSSSIL ADRILLMDTF FQILIYHGET IAQWRKSGYQ DMPEYENFRH BACU007381/1-715 PVLLDSSSIL ADRILLMDTF FQILIYHGET IAQWRKSGYQ DMPEYENFRH ENSBTAP00000004831/1-767 PVLLDSSSIL ADRILLMDTF FQILIYHGET IAQWRKSGYQ DMPEYENFRH bmy_18132T0/1-638 PVLLDSSSIL ADRILLMDTF FQILIYHGET IAQWRKSGYQ DMPEYENFRH ENSP00000306881/1-765 PVLLDSSSIL ADRILLMDTF FQILIYHGET IAQWRKSGYQ DMPEYENFRH 701 750 ENSTTRP00000016231/1-689 LLQAPVDDAQ EILHSRFPMP RYIDTH--GS QARFLLSKVN PSQTHNNMYA BACU007381/1-715 LLQAPVDDAQ EILHSRFPMP RYIDTEHGGS QARFLLSKVN PSQTHNNMYA ENSBTAP00000004831/1-767 LLQAPVDDAQ EILHSRFPMP RYIDTEHGGS QARFLLSKVN PSQTHNNMYA bmy_18132T0/1-638 LLQAPVDDAQ EILHSRFPMP RYIDTEHGGS QARFLLSKVN PSQTHNNMYA ENSP00000306881/1-765 LLQAPVDDAQ EILHSRFPMP RYIDTEHGGS QARFLLSKVN PSQTHNNMYA 751 800 ENSTTRP00000016231/1-689 WGQESGAPIL TDDVSLQVFM DHLKKLAVSS AA-- BACU007381/1-715 WGQESGAPIL TDDVSLQVFM DHLKKLAVSS AA-- ENSBTAP00000004831/1-767 WGQESGAPIL TDDVSLQVFM DHLKTCCVKC CLMC bmy_18132T0/1-638 WGQESGAPIL TDDVSLQVFM DHLKKLAVSS AA-- ENSP00000306881/1-765 WGQESGAPIL TDDVSLQVFM DHLKKLAVSS AA--