KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:24:53 2014 Check: 00 .. Name: ENSBTAP00000004832/1-1153 Len: 1232 Check: 5240 Weight: 1.00 Name: ENSTTRP00000014778/1-1152 Len: 1232 Check: 5473 Weight: 1.00 Name: bmy_09222T0/1-810 Len: 1232 Check: 648 Weight: 1.00 Name: BACU000164/1-843 Len: 1232 Check: 4583 Weight: 1.00 // 1 50 ENSBTAP00000004832/1-1153 -RIAVVEASL LNKCALCLCL TLKAPPSMVN TEQRQHAEHI FLSFRKSKSP ENSTTRP00000014778/1-1152 MMAAALGPPE VIAQLENAAK VLMAPPSMVN TEQRQHAEHI FLSFRKSKSP bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000004832/1-1153 FAVCKHILET SKVDYVLFQA ATAIMEAVVR EWILLEKASI ESLRTFLLTY ENSTTRP00000014778/1-1152 FAVCKHILET SKVDYVLFQA ATAVMEAVVR EWILLERGSV ESLRTFLLTY bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000004832/1-1153 VLQRPHLQKY VREQILLAVA VIVKRGSLDK SIDCKSIFHE VSQLISSGNP ENSTTRP00000014778/1-1152 VLQRPHLQKY VREQILLAVA VIVKRGSLDK SIDCKSIFHE VSQLISSGNP bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000004832/1-1153 TVQTLACSIL TALLSEFSSS SKTSNIGLSM EFHGNCKRVF QEEDLRQIFL ENSTTRP00000014778/1-1152 TVQTLACSIL TALLSEFSSS SKTSNIGLSM EFHGNCKRVF QEEDLRQIFL bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000004832/1-1153 LTVEVLRNFS LQEHLSAQMS SVFQRYLALA NHVLSWNFLP PNLGRHYIAM ENSTTRP00000014778/1-1152 LTVEVLQEFS RREHLSAQMS SVFQRYLALA NQVLSWNFLP PNLGRHYIAM bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 ---------- ---------- ---------- ---------- ---------M 251 300 ENSBTAP00000004832/1-1153 FESSQNVLLK PTESWREALL DSRVMELFFT VHRKIREDSD MAQDSLQCLA ENSTTRP00000014778/1-1152 FESSQNVLLK PTESWREALL DSRVMELFFT VHRKIREDSD MAQDSLQCLA bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 FESSQNVLLK PTESWREALL DSRVMELFFT VHRKIREDSD MAQDSLQCLA 301 350 ENSBTAP00000004832/1-1153 QLASLHGPVF PDEGAQVDYL AHFIEGLLGT INGIEIEDSE AVGISSIISN ENSTTRP00000014778/1-1152 QLASLHGPIF PDEGSQVDYL AHFIEGLLNT INGIEIEDSE AVGISSIISN bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU000164/1-843 QLASLHGPVF PDEGSQVDYL AHFIEGLLNT INGIEIEDSE AVGISSIVSN 351 400 ENSBTAP00000004832/1-1153 LITVFPRNVL TAIPRELFSS FVNCLTHLTC SFGRSAALEE VLDKDDMVYM ENSTTRP00000014778/1-1152 LITVFPRNVL TAIPSELFSS FVSCLTHLTC SFGRSAALEE VLDKDDMVYM bmy_09222T0/1-810 ---------- ---------- ---------- ---------- ------MVYM BACU000164/1-843 LITVFPRNVL TAIPRELFSS FVSCLTHLTC SFGRSAALEE VLDKDDMVYM 401 450 ENSBTAP00000004832/1-1153 EAYDRLLESW LTLVQDDKHF HKGFFTQHAV QVFNSYIQCH LAAPDGTRNL ENSTTRP00000014778/1-1152 EAYDRLLESW LTLVQDDKHF HKGFFTQHAV QVFNSYIQCH LAAPDGTRNL bmy_09222T0/1-810 EAYDRLLESW LTLVQDDKHF HKGFFTQHAV QVFNSYIQCH LAAPDGTRNL BACU000164/1-843 EAYDRLLESW LTLVQDDKHF HKGFFTQHAV QVFNSYIQCH LAAPDGTRNL 451 500 ENSBTAP00000004832/1-1153 TANGVASREE EEISELQEDD RDQFSDQLAS VGMLGRIAAE HCIPLLTSLL ENSTTRP00000014778/1-1152 TANGVASREE EEISELQEDD RDQFSDQLAS VGMLGRIAAE HCIPLLTSLL bmy_09222T0/1-810 TANGVASREE EEISELQEDD RDQFSDQLAS VGMLGRIAAE HCIPLLTSLL BACU000164/1-843 TANGVASREE EEISELQEDD RDQFSDQLAS VGMLGRIAAE HCIPLLTSLL 501 550 ENSBTAP00000004832/1-1153 EERVTRLHGQ LQRQQQQQLL ASPTSGSADS KTLDDLYEDI HWLILVTAEG ENSTTRP00000014778/1-1152 EERVTRLHGQ LQR-RQQQLL ASPASGSADS KVLDDLYEDI HWLILVT--G bmy_09222T0/1-810 EERVTRLHGQ LQR-RQQHLL ASPASGSVDS KVLDDLYEDI HWLILVT--G BACU000164/1-843 EERVTRLHGQ LQR-RQQHLL ASPASGSVDG KVLDDLYEDI HWLILVT--G 551 600 ENSBTAP00000004832/1-1153 YLLADDTQGE TPLIPPEIME YSIKHSSEVD INTTLQILGS PGEKASSIPG ENSTTRP00000014778/1-1152 YLLADDTQGE TPLIPPEIME YSIKHSSEVD INTTLQILGS PGEKASSIPG bmy_09222T0/1-810 YLLADDTQGE TPLIPPEIME YSIKHSSEVD INTTLQILGS PGEKASSIPG BACU000164/1-843 YLLADDTQGE TPLIPPEIME YSIKHSSEVD INTTLQILGS PGEKASSIPG 601 650 ENSBTAP00000004832/1-1153 YNRTDSVIRL LSAILRVSEV ESRAIRADLT HLLSPQMGKD IVWFLKRWAK ENSTTRP00000014778/1-1152 YNRTDSVIRL LSAVLRVSEV ESRAIRADLT HLLSPQMGKD IVWFLKRWAK bmy_09222T0/1-810 YNRTDSVIRL LSAVLRVSEV ESRAIRADLT HLLSPQMGKD IVWFLKRWAK BACU000164/1-843 YNRTDSVIRL LSAVLRVSEV ESRAIRADLT HLLSPQMGKD IVWFLKRWAK 651 700 ENSBTAP00000004832/1-1153 TYLLVDEKLY DQISVPFSTA FGADTEGSQW IVGYLLQKVL SNLSVCSSEQ ENSTTRP00000014778/1-1152 TYLLVDEKLY DQISVPFSTA FGADTEGSQW IVGYLLQKVL SNLSVCSSEQ bmy_09222T0/1-810 TYLLVDEKLY DQISVPFSTA FGADTEGSQW IVGYLLQKVL SNLSVCSSEQ BACU000164/1-843 TYLLVDEKLY DQISVPFSTA FGADTEGSQW IVGYLLQKVL SNLSVCSSEQ 701 750 ENSBTAP00000004832/1-1153 GLADDTVQLL VTLVERRERA NLVIQCENWW NLAKQFASRS PPLNFLSSPV ENSTTRP00000014778/1-1152 DLANDTVQLL VTLVERRERA NLVIQCESWW NLAKQFASRS PPLNFLSSPV bmy_09222T0/1-810 DLANDTVQLL VTLVERRERA NLVIQCESWW NLAKQFASRR PPLNFLSSPV BACU000164/1-843 DLANDTVQLL VTLVERRERA NLVIQCESWW NLAKQFASRR PPLNFLSSPV 751 800 ENSBTAP00000004832/1-1153 QRTLMKALVL GGFAHMDTET KQQYWTEVLQ PLQQRFLRVI NQENFPQTCQ ENSTTRP00000014778/1-1152 QRTLMKALVL GGFAHMDAET KQQYWTEVLQ PLQQRFLRVI NQENFPQMCQ bmy_09222T0/1-810 QRTLMKALVL GGFAHMDAET KQQYWTEVLQ PLQQRFLRVI NQENFPQMCQ BACU000164/1-843 QRTLMKALVL GGFAHMDAET KQQYWTEVLQ PLQQRFLRVI NQENFAQVCQ 801 850 ENSBTAP00000004832/1-1153 QEEVKQEITA TLEALCGIAE ATQVDNVAIL FNFLMDFLTN CIGLMEVYKN ENSTTRP00000014778/1-1152 QEEVKQEITA TLEALCGIAE ATQVDNVAIL FNFLMDFLTN CIGLMEVYKN bmy_09222T0/1-810 QEEVKQEITA TLEALCGIAE ATQVDNVAIL FNFLMDFLTN CIGLMEVYKN BACU000164/1-843 QEEVKQEITA TLEALCGIAE ATQVDNVAIL FSFLMDFLTN CIGLMEVYKN 851 900 ENSBTAP00000004832/1-1153 TPETVNLIIE VFVEVAHKQI CYLGESKAMN LYEACLTLLQ VYSKNNLGRQ ENSTTRP00000014778/1-1152 TPETVNLIIE VFVEVAHKQI CYLGESKAMN LYEACLTLLR VYSRNNVGRQ bmy_09222T0/1-810 TPETVNLIIE VFVEVAHKQI CYLGESKAMN LYEACLTLLR VYSKNNVGRQ BACU000164/1-843 TPETVNLIIE VFVEVAHKQI CYLGESKAMN LYEACLTLLR VYSKNNVGRQ 901 950 ENSBTAP00000004832/1-1153 RIDVTA-EEE QYQDLLLIME LLTNLLSKEF IDFSDT---- ---------- ENSTTRP00000014778/1-1152 RADAPAEEEE QYQDLLLIME LLTNLLSKEF IDFSDT---- ---------- bmy_09222T0/1-810 RVDVAVEEEE QYQDLLLIME LLTNLLSKEF IDFSDT---- ---------- BACU000164/1-843 RVDVTVEEEE QYQDLLLIME LLTNLLSKEF IDFSDTGEHT NLRRFMDVTA 951 1000 ENSBTAP00000004832/1-1153 ---------D EVFRGQEPGP AASRSVSAAD VVLYGVNLIL PLMSQDLLKF ENSTTRP00000014778/1-1152 ---------D EVFRGQEPGP AANRSVSAAD VVLYGVNLIL PLMSQDLLKF bmy_09222T0/1-810 ---------D EVFRGQEPGP AANRSVSAAD VVLYGVNLIL PLMSQDLLKF BACU000164/1-843 VRLRCSHFID EVFRGQEPGP AANRSVSAAD VVLYGVNLIL PLMSQDL--- 1001 1050 ENSBTAP00000004832/1-1153 PTLCNQYYKL ITFICEIFPE KIPQLPEDLF KSLMYSLELG MTS------- ENSTTRP00000014778/1-1152 PTLCNQYYKL ITFICEIFPE KIPQLPEDLF KSLMYSLELG MTS------- bmy_09222T0/1-810 PTLCNQYYKL ITFICEIFPE KIPQLPEDLF KSLMYSLELG MTSYPLSEHR BACU000164/1-843 ---------- ---------- ---------- ---------- ---------- 1051 1100 ENSBTAP00000004832/1-1153 ---------- ---------- ---------- ---------- -------MSS ENSTTRP00000014778/1-1152 ---------- ---------- ---------- ---------- -------MSS bmy_09222T0/1-810 DHLSLGEKRL LEEKFSEFTQ RRSAPGPKVT VSRSPVSLVC SLTSVIRMSP BACU000164/1-843 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSBTAP00000004832/1-1153 EVCQLCLEAL TPLAEQCAKA QETDAPLFLA TRHFLKLVFD MLVLQKHSTE ENSTTRP00000014778/1-1152 EVCQLCLEAL TPLAEQCAKA QETDSPLFLA TRHFLKLVFD MLVLQKHNTE bmy_09222T0/1-810 EVCQLCLEAL TPLAEQCAKA QETDSPLFLA TRHFLKLVFD MLVLQKHNTE BACU000164/1-843 ---------- ---------- ---------- ----LKLVFD MLVLQKHNAE 1151 1200 ENSBTAP00000004832/1-1153 MTTAAGEAFY TLVCLHQAEY SELVETLLSS QQDPVIYQRL ADAFNKLTAS ENSTTRP00000014778/1-1152 MTTAAGEAFY TLVCLHQAEY SELVETLLSS QQDPVIYQRL ADAFNKLTAS bmy_09222T0/1-810 MTTAAGEAFY TLVCLHQAEY SELVETLLSS QQDPVIYQRL ADAFNKLTAS BACU000164/1-843 MTTAAGEAFY TLVCLHQAEY SELVETLLSS QQDPVIYQRL ADAFNKLTAS 1201 1250 ENSBTAP00000004832/1-1153 STPPALDRKQ KMAFLKSLEE FMANVGGLLC VK ENSTTRP00000014778/1-1152 STPPVLDRKQ KMAFLKSLEE FMANVGGLLC VK bmy_09222T0/1-810 STPPVLDRKQ KMAFLKSLEE FMANVGGLLC VK BACU000164/1-843 STPPVLDRKQ KMAFLKSLEE FMANVGGLLC VK