KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:54 2014 Check: 00 .. Name: ENSP00000222573/1-769 Len: 769 Check: 798 Weight: 1.00 Name: ENSBTAP00000004833/1-767 Len: 769 Check: 401 Weight: 1.00 Name: ENSTTRP00000014397/1-765 Len: 769 Check: 4566 Weight: 1.00 Name: bmy_13183T0/1-448 Len: 769 Check: 351 Weight: 1.00 Name: BACU010523/1-695 Len: 769 Check: 8405 Weight: 1.00 // 1 50 ENSP00000222573/1-769 MCGSALAFFT AAFVCLQNDR RGPASFLWAA WVFSLVLGLG QGEDNRCASS ENSBTAP00000004833/1-767 MCRSALVFFT ATLVCLQNCR PGPVPFLRAA WMFSVVLGLG QSEDNRCASS ENSTTRP00000014397/1-765 MCRSALAFFT ATLVCLQNCR PGPAPFLRAA WVFSVVLGLG QSEDNRCASS bmy_13183T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU010523/1-695 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000222573/1-769 NAASCARCLA LGPECGWCVQ EDFISGGSRS ERCDIVSNLI SKGCSVDSIE ENSBTAP00000004833/1-767 NAVSCTKCLA LGPECGWCAQ EDFISGGSKN ERCDTVSNLI HKGCSIDLIE ENSTTRP00000014397/1-765 NAVSCTKCLA LGPECGWCAQ EDFISGGSKN ERCDIVSNLI NKGCSIDLIE bmy_13183T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU010523/1-695 ---------- ---------- --MEGGGSKN ERCDIVSNLI NKGCSIDLIE 101 150 ENSP00000222573/1-769 YPSVHVIIPT ENEINTQVTP GEVSIQLRPG AEANFMLKVH PLKKYPVDLY ENSBTAP00000004833/1-767 YPSVRV-MPS ENEINTQVTP GEVLIQLHQG AEANFMLKIH PLKKYPVDLY ENSTTRP00000014397/1-765 YPSVHV-TPS ENEINTQVTP GEVLIQLRQG AEANFMLKIH PLKKYPVDLY bmy_13183T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU010523/1-695 YPSVHV-TPS ENEINTQVTP GEVLIQLRQG AEANFMLKIH PLKKYPVDLY 151 200 ENSP00000222573/1-769 YLVDVSASMH NNIEKLNSVG NDLSRKMAFF SRDFRLGFGS YVDKTVSPYI ENSBTAP00000004833/1-767 YLVDVSASMH NNIEKLNSVG NDLSRKMAFF SRDFRLGFGS YVDKTVSPYI ENSTTRP00000014397/1-765 YLVDVSASMH NNIEKLNSVG NDLSRKMAFF SHDFRLGFGS YVDKTVSPYI bmy_13183T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU010523/1-695 YLVDVSASMH NNIEKLNSVG NDLSRKMAFF SHDFRLGFGS YVDKTVSPYI 201 250 ENSP00000222573/1-769 SIHPERIHNQ CSDYNLDCMP PHGYIHVLSL TENITEFEKA VHRQKISGNI ENSBTAP00000004833/1-767 SIHPERIHNQ CSDYNLDCMP PHGYIHVLSL TENITEFEKA VHRQKISGNI ENSTTRP00000014397/1-765 SIHPERIHNQ CSDYNLDCMP PHGYIHVLSL TENITEFEKA VHRQKISGNI bmy_13183T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU010523/1-695 SIHPERIHNQ CSDYNLDCMP PHGYIHVLSL TENITEFEKA VHRQKISGNI 251 300 ENSP00000222573/1-769 DTPEGGFDAM LQAAVCESHI GWRKEAKRLL LVMTDQTSHL ALDSKLAGIV ENSBTAP00000004833/1-767 DTPEGGFDAM LQAAVCESHI GWRKEAKRLL LVMTDQTSHL ALDSKLAGIV ENSTTRP00000014397/1-765 DTPEGGFDAM LQAAVCESHI GWRKEAKRLL LVMTDQTSHL ALDSKLA--I bmy_13183T0/1-448 ---------- ---------- ---------- ---------- ---------- BACU010523/1-695 DTPEGGFDAM LQAAVCESHI GWRKEAKRLL LVMTDQTSHL ALDSKLAGIV 301 350 ENSP00000222573/1-769 VPNDGNCHLK NNVYVKSTTM EHPSLGQLSE KLIDNNINVI FAVQGKQFHW ENSBTAP00000004833/1-767 VPNDGNCHLK NNVYVRSTSM EHPSLGQLSE KLIDNNINVI FAVQGKQFHW ENSTTRP00000014397/1-765 VPNDGNCHLK NNVYVRSTSM EHPSLGQLSE KLIDNNINVI FAVQGKQFHW bmy_13183T0/1-448 ---------- ---------- EHPSLGQLSE KLIDNNINVI FAVQGKQFHW BACU010523/1-695 VPNDGNCHLK NNVYVRSTSM EHPSLGQLSE KLIDNNINVI FAVQGKQFHW 351 400 ENSP00000222573/1-769 YKDLLPLLPG TIAGEIESKA ANLNNLVVEA YQKLISEVKV QVENQVQGIY ENSBTAP00000004833/1-767 YKDLLPLLPG TIAGEIESKA ANLNNLVVEA YQKLISEVKV QVENQVKGIY ENSTTRP00000014397/1-765 YKDLLPLLPG TIAGEIESKA ANLNNLVVEA YKKLISEVKV QVENQIKGIY bmy_13183T0/1-448 YKDLLPLLPG TIAGEIESKA ANLNNLVVEA YQKLISEVKV QVENQIKGIY BACU010523/1-695 YKDLLPLLPG TIAGEIESKA ANLNNLVVEA YQKLISEVKV QVENQIKGIY 401 450 ENSP00000222573/1-769 FNITAICPDG SRKPGMEGCR NVTSNDEVLF NVTVTMKKCD VTGGKNYAII ENSBTAP00000004833/1-767 FNITAICPDG TRKPGTDGCG NVTSNDEVLF NVTVTMEKCD VTGGKSYAII ENSTTRP00000014397/1-765 FNITAICPDG SRNPGTDGCG NVTSNDEVLF NVTVTMEKCD VMEGKSYAII bmy_13183T0/1-448 FNITAICPDG SRKPGTDGCG NVTSNDEVLF NVTVTMEKCD VMEGKSYAII BACU010523/1-695 FNITAICPDG SRKPGTDGCG NVTSNDEVLF NVTVTMEKCD VMEGKSYAII 451 500 ENSP00000222573/1-769 KPIGFNETAK IHIHRNCSCQ CEDNRGPKGK CVDETFLDSK CFQCDENKCH ENSBTAP00000004833/1-767 KPIGFNETTK IHIHRNCSCQ CDDSRGPKRK CVEETFLDTK CFQCDENKCH ENSTTRP00000014397/1-765 KPIGFNETTK IHIHRNCSCR CDDSRGPKRK CVEETFLDAK CFQCDENKCH bmy_13183T0/1-448 KPIGFNETTK IHIHRNCRCQ CDDSRGPKRK CVEETFLDAK CFQCDENKCH BACU010523/1-695 KPIGFNETTK IHIHRNCSCQ CDDSRGPKRK CVEETFLDAK CFQCDENQCH 501 550 ENSP00000222573/1-769 FDEDQFSSES CKSHKDQPVC SGRGVCVCGK CSCHKIKLGK VYGKYCEKDD ENSBTAP00000004833/1-767 IDEDTFPSES CKSHKDQPVC SGRGVCICGK CLCHKIKFGK VYGKYCEKDD ENSTTRP00000014397/1-765 FDEDQFPSES CKSHKDQPAC SGRGVCICGK CLCHKIKLGK VYGKYCEKDD bmy_13183T0/1-448 FDEDQFPSES CKSHKDQSAC SGRGVCICGK CLCHKIKLGK VYGKYCEKDD BACU010523/1-695 FDEDQFPSES CKSHKDQPAC SGRGVCICGK CLCHKIKLGK VYGKYCEKDD 551 600 ENSP00000222573/1-769 FSCPYHHGNL CAGHGECEAG RCQCFSGWEG DRCQCPSAAA QHCVNSKGQV ENSBTAP00000004833/1-767 FSCPYHHGNL CAGHGECEAG RCQCFRGWEG DRCQCPSASA QLCVSPKGQV ENSTTRP00000014397/1-765 FSCPYHHGNL CAGHGECEAG KCQCFRGWEG DRCQCPTASA QHCVSPKGQV bmy_13183T0/1-448 FSCPYHHGNL CAGHGECEAG KCQCFRGWEG DRCQCPSASA QHCVNPKGQV BACU010523/1-695 FSCPYHHGNL CAGHGECEAG KCQCFRGWEG DRCQCPSASA QHCVNPKGQV 601 650 ENSP00000222573/1-769 CSGRGTCVCG RCECTDPRSI GRFCEHCPTC YTACKENWNC MQCLHPHNLS ENSBTAP00000004833/1-767 CSGRGTCVCG RCECTDPRSI GRFCEHCPTC HTGCSENWNC VQCLHPHNLS ENSTTRP00000014397/1-765 CSGRGTCVCG RCECTDPRSI GRFCEHCPTC HTACNENWNC MQCLHPHNLS bmy_13183T0/1-448 CSGRGTCVCG RCECTDPRSI GRFCEHCPTC HTACNENWNC VQCLHPHNLS BACU010523/1-695 CSGRGTCVCG RCECTDPRSI GRFCEHCPTC HTACNENWNC VQCLHPHNLS 651 700 ENSP00000222573/1-769 QAILDQCKTS CALMEQQHYV DQTSECFSSP SYLRIFFIIF IVTFLIGLLK ENSBTAP00000004833/1-767 QAILDRCKTS CALKEQ-HYV DQTSECLSSP SYLRIFFIIF IVTFLIGLLK ENSTTRP00000014397/1-765 QAILDRCKTS CTLKEQ-HYV DQTSECFSSP SYLRIFFIIF IVTFLIGLLK bmy_13183T0/1-448 QAILDRCKTS CTLKEQ-HYV DQTSECFSSP SYLRIFFIIF IVTFLIGLLK BACU010523/1-695 QAILDRCKTS CTLKEQ-HYV DQTSECFSSP SYLRIFFIIF IVTFLIGLLK 701 750 ENSP00000222573/1-769 VLIIRQVILQ WNSNKIKSSS DYRVSASKKD KLILQSVCTR AVTYRREKPE ENSBTAP00000004833/1-767 VLIIRQVILQ WNNNKIKSSA DYRVSASKKD KLILQSVCTR AVTYRREKPE ENSTTRP00000014397/1-765 VLIIRQVILQ WNSNKVKSSA DYRVSASKKD KLILQGVCTR AVTYRREKPE bmy_13183T0/1-448 VLIIRQVILQ WNSNKIKSSA DYRVSASKKD KLILQGVCTR AVTYRREKPE BACU010523/1-695 VLIIRQVILQ WNSNKIKSSA DYRVSASKKD KLILQGVCTR AVTYRREKPE 751 800 ENSP00000222573/1-769 EIKMDISKLN AHETFRCNF ENSBTAP00000004833/1-767 EIKMDISKLN AHETFRCNF ENSTTRP00000014397/1-765 EIKMDISKLN THETFRCNF bmy_13183T0/1-448 EIKMDISKLN THETFRCNF BACU010523/1-695 EIKMDISKLN AHETFRCNF