KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:55 2014 Check: 00 .. Name: bmy_00330T0/1-471 Len: 877 Check: 2637 Weight: 1.00 Name: ENSTTRP00000011272/1-870 Len: 877 Check: 9196 Weight: 1.00 Name: ENSP00000263734/1-870 Len: 877 Check: 8956 Weight: 1.00 Name: ENSBTAP00000004836/1-870 Len: 877 Check: 106 Weight: 1.00 Name: BACU013897/1-871 Len: 877 Check: 1805 Weight: 1.00 // 1 50 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 MTADKEKKRS SSERRKEKSR DAARCRRSKE TEVFYELAHE LPLPHSVSSH ENSP00000263734/1-870 MTADKEKKRS SSERRKEKSR DAARCRRSKE TEVFYELAHE LPLPHSVSSH ENSBTAP00000004836/1-870 MTADKEKKRS SSERRKEKSR DAARCRRSKE TEVFYELAHE LPLPHSVSSH BACU013897/1-871 MTADKEKKRS SSERRKEKSR DAARCRRSKE TEVFYELAHE LPLPHSVSSH 51 100 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 LDKASIMRLA ISFLRTHKLL SSVCSESEPE AEADQQMDNL YLKALEGFIA ENSP00000263734/1-870 LDKASIMRLA ISFLRTHKLL SSVCSENESE AEADQQMDNL YLKALEGFIA ENSBTAP00000004836/1-870 LDKASIMRLA ISFLRTHKLL SSVCSENESE ADADQQMDNL YLKALEGFIA BACU013897/1-871 LDKASIMRLA ISFLRTHKLL SSVCSENEPE AEADQQMDNL YLKALEGFIA 101 150 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 VVTQDGDMIF LSENISKFMG LTQVELTGHS IFDFTHPCDH EEIRENLSLK ENSP00000263734/1-870 VVTQDGDMIF LSENISKFMG LTQVELTGHS IFDFTHPCDH EEIRENLSLK ENSBTAP00000004836/1-870 VVTQDGDMIF LSENISKFMG LTQVELTGHS IFDFTHPCDH EEIRENLSLK BACU013897/1-871 VVTQDGDMIF LSENISKFMG LTQVELTGHS IFDFTHPCDH EEIRENLSLK 151 200 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 NGSGFGKKSK DMSTERDFFM RMKCTVTNRG RTVNLKSATW KVLHCTGQVK ENSP00000263734/1-870 NGSGFGKKSK DMSTERDFFM RMKCTVTNRG RTVNLKSATW KVLHCTGQVK ENSBTAP00000004836/1-870 NGSGFGKKSK DMSTERDFFM RMKCTVTNRG RTVNLKSATW KVLHCTGQVK BACU013897/1-871 NGSGFGKKSK DMSTERDFFM RMKCTVTNRG RTVNLKSATW KVLHCTGQVK 201 250 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 VYNNCPPHSS LCGCKEPLLS CLIIMCEPIQ HPSHMDIPLD SKTFLSRHSM ENSP00000263734/1-870 VYNNCPPHNS LCGYKEPLLS CLIIMCEPIQ HPSHMDIPLD SKTFLSRHSM ENSBTAP00000004836/1-870 VYNNCPPHSS LCGCKEPLLS CLIIMCEPIQ HPSHMDIPLD SKTFLSRHSM BACU013897/1-871 VYNNCPPHSS LCGCKEPLLS CLIIMCEPIQ HPSHMDIPLD SKTFLSRHSM 251 300 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 DMKFTYCDDR ITELVGYHPE ELLGRSAYEF YHALDSENMT KSHQNLCTKG ENSP00000263734/1-870 DMKFTYCDDR ITELIGYHPE ELLGRSAYEF YHALDSENMT KSHQNLCTKG ENSBTAP00000004836/1-870 DMKFTYCDDR ITELVGYHPQ ELLGRSAYEF YHALDSENMT KSHQNLCTKG BACU013897/1-871 DMKFTYCDDR ITELVGYHPE ELLGRSAYEF YHALDSENMT KSHQNLCTKG 301 350 bmy_00330T0/1-471 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011272/1-870 QVVSGQYRML AKHGGYVWLE TQGTVIYNPR NLQPQCIMCV NYVLSEIEKN ENSP00000263734/1-870 QVVSGQYRML AKHGGYVWLE TQGTVIYNPR NLQPQCIMCV NYVLSEIEKN ENSBTAP00000004836/1-870 QVVSGQYRML AKHGGYVWLE TQGTVIYNPR NLQPQCIMCV NYVLSEIEKN BACU013897/1-871 QVVSGQYRML AKHGGYVWLE TQGTVIYNPR NLQPQCIMCV NYVLSEIEKN 351 400 bmy_00330T0/1-471 -----MDQTE SPFKPHLMTM NSIFDNSGKV AVSEKSNFLF TKLKEEPEEL ENSTTRP00000011272/1-870 DVVFSMDQTE SPFKPHLMTM NSIFDNSGKV AVSEKSNFLF TKLKEEPEEL ENSP00000263734/1-870 DVVFSMDQTE SLFKPHLMAM NSIFDSSGKG AVSEKSNFLF TKLKEEPEEL ENSBTAP00000004836/1-870 DVVFSMDQTE SPFKPHLLTM NSIFDNSGKV AVSEKSNFLF TKLKEEPEEL BACU013897/1-871 DVVFSMDQTE SPFKPHLMTM NSIFDNSGKV AVSEKSNFLF TKLKEEPEEL 401 450 bmy_00330T0/1-471 AQLAPTAGDA IISLDFGSQN FEESSAYGKA ILPPGQQWAG EPRSHGAHTE ENSTTRP00000011272/1-870 AQLAPTAGDA IISLDFGSQN FEESSAYGKA ILPPGQQWAG EPRSHGAHTE ENSP00000263734/1-870 AQLAPTPGDA IISLDFGNQN FEESSAYGKA ILPPSQPWAT ELRSHSTQSE ENSBTAP00000004836/1-870 AQLAPTAGDT IISLDFGTPN FEESSAYGKG ILPPGQQWTG EVKSHGTHSE BACU013897/1-871 AQLAPTAGDA IISLDFGSQN FEESSVYGKA ILPPGQQWAG EPRSHGAHTE 451 500 bmy_00330T0/1-471 AGSLPAFTVP QAAAPGSTTP SAASSSR-SS SCSTPSSPGD YYTSLDDDLK ENSTTRP00000011272/1-870 AGSLPAFTVP QAAAPGSTTP SAASSSRSSS SCSTPSSPGD YYTSLDDDLK ENSP00000263734/1-870 AGSLPAFTVP QAAAPGSTTP SATSS---SS SCSTPNSPED YYTSLDNDLK ENSBTAP00000004836/1-870 AGSLPAFTVP QAAALGNSTP SASS----SS SCSTPSSPGD YYTSLDDNLK BACU013897/1-871 AGSLPAFTVP QAAAPGSATP SAASSSR-SS SCSTPSSPGD YYTSLDDDLK 501 550 bmy_00330T0/1-471 IEAIEKLFAM DTEAKDPCST QTDFNELDLE TLAPYIPMDG EDFQLSPICP ENSTTRP00000011272/1-870 IEAIEKLFAM DTEAKDQCST QTDFNELDLE TLAPYIPMDG EDFQLSPICP ENSP00000263734/1-870 IEVIEKLFAM DTEAKDQCST QTDFNELDLE TLAPYIPMDG EDFQLSPICP ENSBTAP00000004836/1-870 IEAIEKLFAM DTEAKDQCGT QTDFNELDLE TLAPYIPMDG EDFQLSPICP BACU013897/1-871 IEAIEKLFAM DTETKDPCST QTDFNELDLE TLAPYIPMDG EDFQLSPICP 551 600 bmy_00330T0/1-471 EESLVPETPQ STPQHSFSTM SNIFQPLAPM ASHXPFLLDK Y--QLESKKI ENSTTRP00000011272/1-870 EESLLPETPQ STPQHSFSTM SNIFQPLAPM AAHSPFLLDK Y--QLESKKI ENSP00000263734/1-870 EERLLAENPQ STPQHCFSAM TNIFQPLAPV APHSPFLLDK FQQQLESKKT ENSBTAP00000004836/1-870 EESLLPETPQ SAPQHCFSTM SNIFQPLAPM ASHSTFLLDK YQQQLESKKT BACU013897/1-871 EESLVPETPQ STPQHSFSTM SNIFQPLAPM ASHSPFLLDK Y--QLESKKI 601 650 bmy_00330T0/1-471 EPEQRPVSFI FFDGGSKVSL PQCCGQTCTP LSSMGGRSNT QWPPDPPLHL ENSTTRP00000011272/1-870 EPEQRPVSFI FFDGGSKVSL PQCCGQTCTP LSSMGGRSNT QWPPDPPLHV ENSP00000263734/1-870 EPEHRPMSSI FFDAGSKASL PPCCGQASTP LSSMGGRSNT QWPPDPPLHF ENSBTAP00000004836/1-870 EPEQRRVSFA FFDGGSRVSL LQCCGQTYTP LSSMGGISNT QWPPDPPLQL BACU013897/1-871 EPEQRPVSFI FFDGGSKVSL PQCCGQTCTP LSSMGGRSNT QWPPDPPLHL 651 700 bmy_00330T0/1-471 GPTKWPGEDQ HVESLGASPL GPPITAPHLS MFKKRSAKGF GPQGPDVMSP ENSTTRP00000011272/1-870 GPTKWPGEDP -LESLGASPL GPPVTAPHLS VFKKRSAKGF GPQGPDVMSP ENSP00000263734/1-870 GPTKWAVGDQ RTEFLGAAPL GPPVSPPHVS TFKTRSAKGF GARGPDVLSP ENSBTAP00000004836/1-870 GPTKWPGEDR HAEAVGAAPL GLPPATPHLA MLKKRSAKGF GPQGPDVMSP BACU013897/1-871 GPTKWPGEDQ HVESLGASPL GPPITAPHLS MFKKRSAKGF GPQGPDVMSP 701 750 bmy_00330T0/1-471 AMVALSNKLK LKRQLEYEEQ AFQDMSGVSA APGEAGWGLG LSTEIQAGAE ENSTTRP00000011272/1-870 AMVALSNKLK LKRQLEYEEQ AFQDMSGGXX XXXXXXXXXX XXXXXXXX-X ENSP00000263734/1-870 AMVALSNKLK LKRQLEYEEQ AFQDLSGGDP PGGSTSHLMW KRMKNLRG-G ENSBTAP00000004836/1-870 AMIALSNKLK LKRQLEYEEQ AFQDMSGGDP PGSSTSHLMW KRMKSLRGGG BACU013897/1-871 AMVALSNKLK LKRQLEYEEQ AFQDMSGGDP PGSSASQLMW KRMKSLRGSG 751 800 bmy_00330T0/1-471 GSEGLPGRPV RVSAARPTLT QVEDLGL--- ---WPLPSTS ALPHPGGPTR ENSTTRP00000011272/1-870 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000263734/1-870 SCPLMPDKPL SANVPNDKFT QNPMRGLGHP LRHLPLPQPP SAISPGENSK ENSBTAP00000004836/1-870 TCSLMPDKLP NANVPNDEFI QNPVRGRSQP LRHLSPPQPP SATSPGEPTK BACU013897/1-871 SCPLLPDKLP SANVPSDEFI RNPMRGGSQP LRHLTPPQLP SAVSPGEPAK 801 850 bmy_00330T0/1-471 QQRFTVDVEK DEESQGQWEL PSDAGQAAER KR---PQW-- ---------- ENSTTRP00000011272/1-870 -XXXXXXXXX XXXX--XXXX XXXXXXXXMT SRLLGPSFEP YLLPELTRYD ENSP00000263734/1-870 -SRFPPQCYA TQYQ--DYSL SSAHKVSGMA SRLLGPSFES YLLPELTRYD ENSBTAP00000004836/1-870 -SGFPAQCYA PQYQ--DYSL PAAHKMSGMA SRLLGPSFEP YLLPELTRYD BACU013897/1-871 -SGFPPHCYT PQYQ--DYSL PAAHKVSGMT SRLLGPSFEP YLLPELTRYD 851 900 bmy_00330T0/1-471 ---------- ---------- ------- ENSTTRP00000011272/1-870 CEVNVPVPGS STLLQGGDLL RALDQAT ENSP00000263734/1-870 CEVNVPVLGS STLLQGGDLL RALDQAT ENSBTAP00000004836/1-870 CEVNVPVPGT STLLQGGDLL RALDQAT BACU013897/1-871 CEVNVPVPGS STLLQGGDLL RALDQAT