KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:24:59 2014 Check: 00 .. Name: bmy_01653T0/1-581 Len: 682 Check: 6637 Weight: 1.00 Name: ENSTTRP00000005774/1-677 Len: 682 Check: 5317 Weight: 1.00 Name: BACU019115/1-662 Len: 682 Check: 8250 Weight: 1.00 Name: ENSP00000307491/1-677 Len: 682 Check: 4639 Weight: 1.00 Name: ENSBTAP00000004876/1-677 Len: 682 Check: 4531 Weight: 1.00 // 1 50 bmy_01653T0/1-581 MKNEHMSYHL QLLRRLEVSY VIRDEVEKYN RNGVNALQLD PALNRLFTAG ENSTTRP00000005774/1-677 -MAAHHRQNT AGRRKVQVSY VIRDEVEKYN RNGVNALQLD PALNRLFTAG BACU019115/1-662 ---------- ------QVSY VIRDEVEKYN RNGVNALQLD PALNRLFTAG ENSP00000307491/1-677 -MAAHHRQNT AGRRKVQVSY VIRDEVEKYN RNGVNALQLD PALNRLFTAG ENSBTAP00000004876/1-677 -MAAHHRQNT AGRRKVQVSY VIRDEVEKYN RNGVNALQLD PALNRLFTAG 51 100 bmy_01653T0/1-581 RDSIIRIWSV NQHKQDPYIA SMEHHTDW-- ---------- ---------- ENSTTRP00000005774/1-677 RDSIIRIWSV NQHKQDPYIA SMEHHTDWVN DIVLCCNGKT LISASSDTTV BACU019115/1-662 RDSIIRIWSV NQHKQDPYIA SMEHHTDWVN DIVLCCNGKT LISASSDTTV ENSP00000307491/1-677 RDSIIRIWSV NQHKQDPYIA SMEHHTDWVN DIVLCCNGKT LISASSDTTV ENSBTAP00000004876/1-677 RDSIIRIWSV NQHKQDPYIA SMEHHTDWVN DIVLCCNGKT LISASSDTTV 101 150 bmy_01653T0/1-581 ---------- --------DY VKALAYAKDK ELVASAGLDR QIFLWDVNTL ENSTTRP00000005774/1-677 KVWNAHKGFC MSTLRTHKDY VKALAYAKDK ELVASAGLDR QIFLWDVNTL BACU019115/1-662 KVWNAHKGFC MSTLRTHKDY VKALAYAKDK ELVASAGLDR QIFLWDVNTL ENSP00000307491/1-677 KVWNAHKGFC MSTLRTHKDY VKALAYAKDK ELVASAGLDR QIFLWDVNTL ENSBTAP00000004876/1-677 KVWNAHKGFC MSTLRTHKDY VKALAYAKDK ELVASAGLDR QIFLWDVNTL 151 200 bmy_01653T0/1-581 TALTASNNTV TTSSLSGNKD SIYSLAMNQL GTIIVSGSTE KVLRVWDPRT ENSTTRP00000005774/1-677 TALTASNNTV TTSSLSGNKD SIYSLAMNQL GTIIVSGSTE KVLRVWDPRT BACU019115/1-662 TALTASNNTV TTSSLSGNKD SIYSLAMNQL GTIIVSGSTE KVLRVWDPRT ENSP00000307491/1-677 TALTASNNTV TTSSLSGNKD SIYSLAMNQL GTIIVSGSTE KVLRVWDPRT ENSBTAP00000004876/1-677 TALTASNNTV TTSSLSGNKD SIYSLAMNQL GTIIVSGSTE KVLRVWDPRT 201 250 bmy_01653T0/1-581 CAKLMKLKGH TDNVKALLLN RDGTQCLSGS SDGTIRLWSL GQQRCIATYR ENSTTRP00000005774/1-677 CAKLMKLKGH TDNVKALLLN RDGTQCLSGS SDGTIRLWSL GQQRCIATYR BACU019115/1-662 CAKLMKLKGH TDNVKALLLN RDGTQCLSGS SDGTIRLWSL GQQRCIATYR ENSP00000307491/1-677 CAKLMKLKGH TDNVKALLLN RDGTQCLSGS SDGTIRLWSL GQQRCIATYR ENSBTAP00000004876/1-677 CAKLMKLKGH TDNVKALLLN RDGTQCLSGS SDGTIRLWSL GQQRCIATYR 251 300 bmy_01653T0/1-581 VHDEGVWALQ VNDTFTHVYS GGRDRKIYCT DLRNPDIRVL ICEEKAPVLK ENSTTRP00000005774/1-677 VHDEGVWALQ VNDTFTHVYS GGRDRKIYCT DLRNPDIRVL ICEEKAPVLK BACU019115/1-662 VHDEGVWALQ VNDTFTHVYS GGRDRKIYCT DLRNPDIRVL ICEEKAPVLK ENSP00000307491/1-677 VHDEGVWALQ VNDAFTHVYS GGRDRKIYCT DLRNPDIRVL ICEEKAPVLK ENSBTAP00000004876/1-677 VHDEGVWALQ VNDAFTHVYS GGRDRKIYCT DLRNPDIRVL ICEEKAPVLK 301 350 bmy_01653T0/1-581 MELDRSADPP PAIWVATTKS TVNKWHEEQT LKGIHNFRAS GDYDNDCTNP ENSTTRP00000005774/1-677 MELDRSADPP PAIWVATTKS TVNKW----T LKGIHNFRAS GDYDNDCTNP BACU019115/1-662 MELDRSADPP PAIWVATTKS TVNKW----T LKGIHNFRAS GDYDNDCTNP ENSP00000307491/1-677 MELDRSADPP PAIWVATTKS TVNKW----T LKGIHNFRAS GDYDNDCTNP ENSBTAP00000004876/1-677 MELDRSADPP PAIWVATTKS TVNKW----T LKGIHNFRAS GDYDNDCTNP 351 400 bmy_01653T0/1-581 ITPLCTQPDQ VIKGGASIIQ CHILNDKRHI LTKDTNNNVA YWDVLK---- ENSTTRP00000005774/1-677 ITPLCTQPDQ VIKGGASIIQ CHILNDKRHI LTKDTNNNVA YWDVLKACKV BACU019115/1-662 ITPLCTQPDQ VIKGGASIIQ CHILNDKRHI LTKDTNNNVA YWDVLKACKV ENSP00000307491/1-677 ITPLCTQPDQ VIKGGASIIQ CHILNDKRHI LTKDTNNNVA YWDVLKACKV ENSBTAP00000004876/1-677 ITPLCTQPDQ VIKGGASIIQ CHILNDKRHI LTKDTNNNVA YWDVLKACKV 401 450 bmy_01653T0/1-581 ---------- ---------- ---------- --MLTITLDE SDCFAAWVSA ENSTTRP00000005774/1-677 EDLGKVDFED EIKKRFKMVY VPNWFSVDLK TGMLTITLDE SDCFAAWVSA BACU019115/1-662 EDLGKVDFED EIKKRFKMVY VPNWFSVDLK TGMLTITLDE SDCFAAWVSA ENSP00000307491/1-677 EDLGKVDFED EIKKRFKMVY VPNWFSVDLK TGMLTITLDE SDCFAAWVSA ENSBTAP00000004876/1-677 EDLGKVDFED EIKKRFKMVY VPNWFSVDLK TGMLTITLDE SDCFAAWVSA 451 500 bmy_01653T0/1-581 KDAGFSSPDG SDPKLNLGGL LLQALLEYWP RTHVNPIDEE ENEVNHVNGE ENSTTRP00000005774/1-677 KDAGFSSPDG SDPKLNLGGL LLQALLEYWP RTHVNPIDEE EKKVNHVNGE BACU019115/1-662 KDAGFSSPDG SDPKLNLGGL LLQALLEYWP RTHVNPIDEE ENEVNHVNGE ENSP00000307491/1-677 KDAGFSSPDG SDPKLNLGGL LLQALLEYWP RTHVNPMDEE ENEVNHVNGE ENSBTAP00000004876/1-677 KDAGFSSPDG SDPKLNLGGL LLQALLEYWP RTHVNPIDEE ENEVNHVNGE 501 550 bmy_01653T0/1-581 QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FR-------- ---------- ENSTTRP00000005774/1-677 QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FRLLCRDSGG ETESMLLNET BACU019115/1-662 QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FRLLCRDSGG ETESMLLNET ENSP00000307491/1-677 QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FRLLCRDSGG ETESMLLNET ENSBTAP00000004876/1-677 QENRVQKGNG YFQVPPHTPV IFGEAGGRTL FRLLCRDSGG ETESMLLNET 551 600 bmy_01653T0/1-581 -------IQI LKNMPKFNKI PFYLQPHASS GAKTLKKDRL SASDMLQVRK ENSTTRP00000005774/1-677 VPQWVIDITV DKNMPKFNKI PFYLQPHASS GAKTLKKDRL SASDMLQVRK BACU019115/1-662 VPQWVIDITV DKNMPKFNKI PFYLQPHASS GAKTLKKDRL SASDMLQVRK ENSP00000307491/1-677 VPQWVIDITV DKNMPKFNKI PFYLQPHASS GAKTLKKDRL SASDMLQVRK ENSBTAP00000004876/1-677 VPQWVIDITV DKNMPKFNKI PFYLQPHASS GAKTLKKDRL SASDMLQVRK 601 650 bmy_01653T0/1-581 VMEHVYEKII NLDNESQTTS SSNNEKPGEQ EKEEDIAVLA EEKIELLCQD ENSTTRP00000005774/1-677 VMEHVYEKII NLDNESQTTS SSNNEKPGEQ EKEEDIAVLA EEKIELLCQD BACU019115/1-662 VMEHVYEKII NLDNESQTTS SSNNEKPGEQ EKEEDIAVLA EEKIELLCQD ENSP00000307491/1-677 VMEHVYEKII NLDNESQTTS SSNNEKPGEQ EKEEDIAVLA EEKIELLCQD ENSBTAP00000004876/1-677 VMEHVYEKII NLDNESQTTS SSNNEKPGEQ EKEEDIAVLA EEKIELLCQD 651 700 bmy_01653T0/1-581 QVLDPNMDLR TVKHFIWKSG GDLTLHYRQK ST ENSTTRP00000005774/1-677 QVLDPNMDLR TVKHFIWKSG GDLTLHYRQK ST BACU019115/1-662 QVLDPNMDLR TVKHFIWKSG GDLTLHYRQK ST ENSP00000307491/1-677 QVLDPNMDLR TVKHFIWKSG GDLTLHYRQK ST ENSBTAP00000004876/1-677 QVLDPNMDLR TVKHFIWKSG GDLTLHYRQK ST