KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:00 2014 Check: 00 .. Name: ENSP00000258111/1-210 Len: 227 Check: 8569 Weight: 1.00 Name: ENSTTRP00000004555/1-206 Len: 227 Check: 144 Weight: 1.00 Name: ENSBTAP00000004881/1-210 Len: 227 Check: 8287 Weight: 1.00 Name: bmy_07954T0/1-121 Len: 227 Check: 3573 Weight: 1.00 Name: BACU016428/1-211 Len: 227 Check: 3860 Weight: 1.00 // 1 50 ENSP00000258111/1-210 MAKLRVAYEY TEAEDKSIRL GLFLIISGVV SLFIFGFCWL SPALQDLQAT ENSTTRP00000004555/1-206 ----RVAYEY TEAEDKSIRL GLFLIISGVV SLFIFGFCWL SPALQDLQAT ENSBTAP00000004881/1-210 MAKLRVAYEY TEAEDKSIRL GLFLIISGVV SLFIFGFCWL SPALQDLQAT bmy_07954T0/1-121 MAKLRVAYEY TEAEDKSIRL GLFLIISGVV SLFIFGFCWL SPALQDLQAT BACU016428/1-211 MAKLRVAYEY TEAEDKSIRL GLFLIISGVV SLFIFGFCWL SPALQDLQAT 51 100 ENSP00000258111/1-210 EANCTVLSVQ QIGEVFECTF TCGADCRGTS QYPCVQVYVN NSESNSRALL ENSTTRP00000004555/1-206 AANCTVLSVQ QIGEVFECTF TCGADCRGTS QYPCVQVYVN NSESNSRALL ENSBTAP00000004881/1-210 AANCTVLSVQ QIGEVFECTF TCGADCRGTS QYPCVQVYVN NSESNSRALL bmy_07954T0/1-121 AANCTVLSVQ QIGEVFECTF TCGADCRGTS QYPCVQVYVN NSESNSRALL BACU016428/1-211 AANCTVLSVQ QIGEVFECTF TCGADCRGTS QYPCVQVYVN NSESNSRALL 101 150 ENSP00000258111/1-210 HSDEHQLLTN PKC-----SY IPPCK----R ENQKNLESVM NWQQYWKDEI ENSTTRP00000004555/1-206 HSDEHQLLTN PKC-----SY IPPCK----R ENQKNLESVM NWQQYWKDEI ENSBTAP00000004881/1-210 HSDEHQLLTN PKC-----SY IPPCK----R ENQKNLESVM NWQQYWKDEI bmy_07954T0/1-121 HSDEHQLLTN PK-------- ---------- ---------- ---------- BACU016428/1-211 HSDEHQLLTN PKVRTPREGC LAPAEILRFA GGASVLDPAR GGSEYARVTR 151 200 ENSP00000258111/1-210 GSQPFTCYFN QHQR------ -PDDVLLHRT HDEIVLLHCF LWPLVTFVVG ENSTTRP00000004555/1-206 GSQPFTCYFN QFQR------ -PDDVLLHRT HDEIVLLHCF LWPLVTFVVG ENSBTAP00000004881/1-210 GSQPFTCYFN QFQR------ -PDDVLLHRT HDEIVLLHCF LWPLVTFVVG bmy_07954T0/1-121 ---------- ---------- ---------- --------DF YF-------- BACU016428/1-211 RRRGFAGYTQ TRSKYIGRPG SPGPSGGFVN GDPCVVPGGF LYTPVLLVPD 201 250 ENSP00000258111/1-210 VLIVVLTICA KSLAVKAEAM KKRKFS- ENSTTRP00000004555/1-206 VLIVVLTICA KSLAVKAEAM KKRKFS- ENSBTAP00000004881/1-210 VLIVVLTICA KSLAVKAEAM KKRKFS- bmy_07954T0/1-121 ---------- -------EDF KK----- BACU016428/1-211 F--------- -------EAL AQLRLGP