KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:01 2014 Check: 00 .. Name: ENSTTRP00000014385/1-838 Len: 871 Check: 7114 Weight: 1.00 Name: ENSP00000383185/1-852 Len: 871 Check: 9872 Weight: 1.00 Name: ENSBTAP00000004882/1-684 Len: 871 Check: 2790 Weight: 1.00 Name: bmy_13181T0/1-800 Len: 871 Check: 3594 Weight: 1.00 Name: BACU010522/1-546 Len: 871 Check: 1622 Weight: 1.00 // 1 50 ENSTTRP00000014385/1-838 ---------- ----MLTSEK AHFWSGGISQ STSEGNLFDM EAQQASKNCN ENSP00000383185/1-852 ---------- ----MLITER KHFRSGRIAQ SMSEANLIDM EAGKLSKSCN ENSBTAP00000004882/1-684 ---------- ---------- ---------- ---------- ---------- bmy_13181T0/1-800 MFRSVQLVRQ KGGIMLTSEK AHFWSGGISR STSEGNLFDV EAPKSSKNCN BACU010522/1-546 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014385/1-838 IT--PDLGLP LNWPDDFTLH GNSASSAMNP FWNELSASNP FLDDII-LRN ENSP00000383185/1-852 ITECQDPDLL HNWPDAFTLR GNNASKVANP FWNQLSASNP FLDDITQLRN ENSBTAP00000004882/1-684 ---------- ---------- ---------- ---------- ---------- bmy_13181T0/1-800 IT---DPGLP LSWPDDFTLH GNCASNATNP FWNELSASNP FLDDIIQLRN BACU010522/1-546 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000014385/1-838 NQKRDNISNL KEDPFLFFRE VETGNSFGSS GDELDVHQLL RQSSSRKSER ENSP00000383185/1-852 NRKRNNISIL KEDPFLFCRE IENGNSFDSS GDELDVHQLL RQTSSRNSGR ENSBTAP00000004882/1-684 ---------- ---------- ---------- ---------- ---------- bmy_13181T0/1-800 NQKRDNISIL KEDPFLFFRE LETGNSFGSS GDKLDVHQLL RQSSSRKSER BACU010522/1-546 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000014385/1-838 --SVSELLDI LDDTALAHQN IHNSDQILEQ DLEWLQND-- --KMAWLSQH ENSP00000383185/1-852 SKSVSELLDI LDDTAHAHQS IHNSDQILLH DLEWLKNDRE AYKMAWLSQR ENSBTAP00000004882/1-684 ---------- ---------- ---------- -------DRE AYKMAWLSHR bmy_13181T0/1-800 SKSVSELLDI LDDTAHAHQN IHNSDQILEQ DLESLQNDRE AYKMAWLSQR BACU010522/1-546 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000014385/1-838 HLACSCLDLN TINQSPGWAQ TQVAETTIVC KLNYQGGSVQ LPESDITVHV ENSP00000383185/1-852 QLARSCLDLN TISQSPGWAQ TQLAEVTIAC KVNHQGGSVQ LPESDITVHV ENSBTAP00000004882/1-684 HLARSCLDLS TINQSPGWAQ TQVAETTVVC KLNHQGGSVQ LPESDITVHV bmy_13181T0/1-800 HLAHSCLDLN TINQSPGWAQ TQVAETTIVC KLNYQGGSVQ LPESDITVHV BACU010522/1-546 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000014385/1-838 PQGHVAVGEY QQVS-RAFLD PPQMLNHDLS CTVSPLLEIM LGNLNTMEAI ENSP00000383185/1-852 PQGHVAVGEF QEVSLRAFLD PPHMLNHDLS CTVSPLLEIM LGNLNTMEAL ENSBTAP00000004882/1-684 PQGHVAVGEF QEVSLRAFLD PPQKLNHDLS CTISPLLEIM LGNLNTMEAI bmy_13181T0/1-800 PQGHVAVGEY QEVSLRAFLD PPQMLNHDLS CTVSPLLEIM LGNLNTMEAI BACU010522/1-546 ---------- ---------- ---MLNHDLS CTVSPLLEIM LGNHNTMEAI 301 350 ENSTTRP00000014385/1-838 LLEMKIGAEV KEDPFSQVMT EVVCFHSLGK EGPFKVLNNC YIYKDTIQVK ENSP00000383185/1-852 LLEMKIGAEV RKDPFSQVMT EMVCLHSLGK EGPFKVLSNC YIYKDTIQVK ENSBTAP00000004882/1-684 LLEMKIGAEV KRDPFSQVMA EIVCLHSLDK EGPFKALNNC YIYKDTIQVK bmy_13181T0/1-800 LLEMKIGAEV KEDPFSQVMT EVVCFHSLDK EGPFKVLNNC YIYKDTIQVK BACU010522/1-546 LLEMKIGAEV KEDPFSQVMT EVVCFHSLGK EGPFKVLNNC YIYKDTIQVK 351 400 ENSTTRP00000014385/1-838 LVDLSQAMYL VVAAQTKGTQ SPAATIWDYI HKTISVGTYG HKYIHPSFTA ENSP00000383185/1-852 LIDLSQVMYL VVAAQAKALP SPAATIWDYI HKTTSIGIYG PKYIHPSFTV ENSBTAP00000004882/1-684 LVDLSQVMYL VVAAQTKGTQ SPVATIWDYI HRTISVGIYG PKYIHPSFTA bmy_13181T0/1-800 LVELSQAMYL VVAAQTKSTQ SPAATIWDYI HKTTSVGIYG PKYIHPSFTV BACU010522/1-546 LVELSQAMYL VVAAQTKGTQ SPAATIWDYI HKTTSVGIYG PKYIHPSFTV 401 450 ENSTTRP00000014385/1-838 IFTVCGHSYM PGRLTISDIK KGGN-STSPV VFQLW-KHSF LLEKPQDLSI ENSP00000383185/1-852 VLTVCGHNYM PGQLTISDIK KGGK-NISPV VFQLWGKQSF LLDKPQDLSI ENSBTAP00000004882/1-684 VFTVCGHSYM PGKLTISDIK KGGKPNTSPV VFQLWGKHSF LLEKPQDLNI bmy_13181T0/1-800 IFTVCGHSYM PGRLIISDIK KGGKHNTSPV VFQLWGKHSF LLEKPQDLSI BACU010522/1-546 IFTVCGHRYM PGRLIISDIK KGGKHNTSPV VFQLWRKHSV LLEKPQDLSI 451 500 ENSTTRP00000014385/1-838 SVFSCDPDFE VKVEGKGKEI KQKQLQSGQV VHQQFLFSLV DSREMHLFVF ENSP00000383185/1-852 SIFSCDPDFE VKTEGERKEI KQKQLEAGEV VHQQFLFSLV EHREMHLFDF ENSBTAP00000004882/1-684 SVLSCDPDFE VKAERKRKEV KQKHLQSGQA VHQQFFFSLV DSREMHLFVF bmy_13181T0/1-800 SVFSCDPDFE VKXEGKGKEI KQKQLQSGQV VHQQFLFSLV DSREMHLFVF BACU010522/1-546 SVFSCDPNFE VKVEGKGKGI KQKQLQSGQV VHQQFLFSLV DSREMHLLVF 501 550 ENSTTRP00000014385/1-838 RVQVEPPNGR PVTQFFITAP DPAPNLKSLS NLPGDLQKEK EIKSAPLLPT ENSP00000383185/1-852 CVQVEPPNGE PVAQFSITTP DPTPNLKRLS NLPGYLQKKE EIKSAPLSPK ENSBTAP00000004882/1-684 CVQVEPRSGR PVTQFFITSP DPAPNLKSLS NLPSDLQKKK EINSSPLLPT bmy_13181T0/1-800 RVQVEPPNGR PVTQFFITTP DPAPNLKSLS NLPGDLQKEK EIKSAPLLPT BACU010522/1-546 HVQVEPPNGR PVTQFFITTP DPAPNLKSLS NLPGDLQKEK EIKSAPLLPT 551 600 ENSTTRP00000014385/1-838 VRVKYPTFQN KNLNFANCGV TLKTVLRQSK IDYLL-YF-G DTVALLVD-K ENSP00000383185/1-852 ILVKYPTFQD KTLNFSNYGV TLKAVLRQSK IDYFLEYFKG DTIALLGEGK ENSBTAP00000004882/1-684 VHVKYPTFQD KKLNFTSYGI TQKTVIRQNK IEYLLEYFKG DTVALLGEGK bmy_13181T0/1-800 VHVKYPTFQN KNLNFANYGV TLKTVLRQSK IDYLLEYFKG DTIALLGEGK BACU010522/1-546 VHVKYPTFQN KNLNFANYGV TLKTVLRQSK IDYLLQYFKG DTIAFLGEGK 601 650 ENSTTRP00000014385/1-838 VKAIGXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000383185/1-852 VKAIGQSKVK EWYVGVLRGK IGLVHCKNVK VISKEQVMFM SDSVFTTRNL ENSBTAP00000004882/1-684 VKAIGQSKVK EWYVGVLRGK IGLLHCKNIR VIAKEQVMSM SDNVFTTRNL bmy_13181T0/1-800 VKAVGQSKVK EWYVGVLRGR IGLLHCKNVK VIAKEQVMSM SEDVFTTRNL BACU010522/1-546 VKAIGQSKVK EWYVGVLRGR IGLLHCKNVK VIAKEQVMSM SENVFTTRNL 651 700 ENSTTRP00000014385/1-838 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000383185/1-852 LEQIVLPLKK LTYIYSVVLT LVSEKVYDWK VLADVLGYSH LSLEDFDQIQ ENSBTAP00000004882/1-684 LEQITLPLKK LTYIYSVVLT LVSEKVYDWK VLAYVLGYSH LALEDFDQLQ bmy_13181T0/1-800 LEQIALPLKK LTYIYSVVLT LVSEKVYDWK VLADVLGYSH LALEDFDRIQ BACU010522/1-546 LEQVTLPLKK LTYIYSVVLT LVSEKVYDWK VLADVLGYSH LALKDFDRIQ 701 750 ENSTTRP00000014385/1-838 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXALLKTD CQGLVAHLVQ ENSP00000383185/1-852 ADKESEKVSY VIKKLKEDCH TERNTRKFLY ELIVALLKMD CQELVARLIQ ENSBTAP00000004882/1-684 ADKESEKVAY VVKKLKEDCH ADRNARKFLY ELTVALLKID CQGLVVHLVQ bmy_13181T0/1-800 ADKESEKVSY VIKKLKEDCH ADRNTRKFLY ELTVALLKID CQGLVAHLVQ BACU010522/1-546 ADKESEKVSY VVNKLKEDCH ADRNTRKFLY ELTVALLKID CQGSVAHLVQ 751 800 ENSTTRP00000014385/1-838 EAASLTSAVK LGKGWRKLAE KLVRLTKRQM EAYEIPHQGK AGDVAVEMMW ENSP00000383185/1-852 EAAVLTSAVK LGKGWRELAE KLVRLTKQQM EAYEIPHRGN TGDVAVEMMW ENSBTAP00000004882/1-684 EAAILTSAVK LGKGWRELAE KLVRLTKRQM EAYEIPHQGK SGDLAVEMMW bmy_13181T0/1-800 EAAILTSAVR LGKRWRKLAE KLVRLTKRQM EAYEIPHQGK AGDVAVEVR- BACU010522/1-546 EAAIRTSAVR LGKGWRKLAE KLVRLTKRQM EAYEIPHPGK AGDVAVEYY- 801 850 ENSTTRP00000014385/1-838 KPACDFLYTW SAHYGNSYRD VLQDLQSALD RMKNPVTKQR RDLTGALILV ENSP00000383185/1-852 KPAYDFLYTW SAHYGNNYRD VLQDLQSALD RMKNPVTKHW RELTGVLILV ENSBTAP00000004882/1-684 KPAYDFLYTW SAHYGNSYRD VLQDLQSALD RMKNPVTKQW RDLTGALILV bmy_13181T0/1-800 ---------- ---------- ---------- ---------- ------LLFV BACU010522/1-546 ---------- ---------- ---------- ---------- ------NALC 851 900 ENSTTRP00000014385/1-838 NSLEVLRATT FSTSEEV--- - ENSP00000383185/1-852 NSLEVLRVTA FSTSEEV--- - ENSBTAP00000004882/1-684 NSLEVLRATA FSTSEEPDFL L bmy_13181T0/1-800 ---------- ---------- - BACU010522/1-546 YNLEFRKHTP FFEMME---- -