KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:01 2014 Check: 00 .. Name: ENSTTRP00000011515/1-388 Len: 456 Check: 3908 Weight: 1.00 Name: BACU001893/1-254 Len: 456 Check: 2472 Weight: 1.00 Name: bmy_11963T0/1-454 Len: 456 Check: 6191 Weight: 1.00 Name: ENSP00000314030/1-412 Len: 456 Check: 683 Weight: 1.00 Name: ENSBTAP00000004890/1-412 Len: 456 Check: 1161 Weight: 1.00 // 1 50 ENSTTRP00000011515/1-388 ---------- ---------- ---------- ---------- ---------- BACU001893/1-254 ---------- ---------- ---------- ---------- --MANVADTK bmy_11963T0/1-454 LRFPLAVSLG LRCRCWRYRC RGPGSAPPAP PPSSLSAARP AAMANVADTK ENSP00000314030/1-412 ---------- ---------- ---------- ---------- --MANVADTK ENSBTAP00000004890/1-412 ---------- ---------- ---------- ---------- --MANVADTK 51 100 ENSTTRP00000011515/1-388 ---------- -SENELKKAY RKLAKEYHPD KNPNAGDKFK EISFAYEVLS BACU001893/1-254 LYDILGVPPG ASENELKKAY RKLAKEYHPD KNPNAGDKFK EISFAYEVLS bmy_11963T0/1-454 LYDILGVPPG ASENELKKAY RKLAKEYHPD KNPNAGDKFK EISFAYEVLS ENSP00000314030/1-412 LYDILGVPPG ASENELKKAY RKLAKEYHPD KNPNAGDKFK EISFAYEVLS ENSBTAP00000004890/1-412 LYDILGVPPG ASENELKKAY RKLAKEYHPD KNPNAGDKFK EISFAYEVLS 101 150 ENSTTRP00000011515/1-388 NPEKRELYDR YGEQGLREGS GGGGGMDDIF SHIFGGGLFG FMGNQSRCRN BACU001893/1-254 NPEKRELYDR YGEQGLRE-- ---------- ---------- ---------- bmy_11963T0/1-454 NPEKRELYDR YGEQGLREGS SGGGGMDDIF SHIFGGGLFG FMGNQSRSRN ENSP00000314030/1-412 NPEKRELYDR YGEQGLREGS GGGGGMDDIF SHIFGGGLFG FMGNQSRSRN ENSBTAP00000004890/1-412 NPEKRELYDR YGEQGLREGS GGGGGMDDIF SHIFGGGLFS FMGNQSRSRN 151 200 ENSTTRP00000011515/1-388 G--RGEDMMH PL-VSLEDLY NGKTTKLQLS KNVLCSACSG QGGKSGAVQK BACU001893/1-254 ---------- ---------- ---------- ---------- -------VQV bmy_11963T0/1-454 GRRRGEDMMH PLKVSLEDLY NGKTTKLQLS KNVLCSACSG QGGKSGAVQK ENSP00000314030/1-412 GRRRGEDMMH PLKVSLEDLY NGKTTKLQLS KNVLCSACSG QGGKSGAVQK ENSBTAP00000004890/1-412 GRRRGEDMMH PLKVSLEDLY NGKTTKLQLS KNVLCSACSG QGGKSGAVQK 201 250 ENSTTRP00000011515/1-388 CSACRGRGVR IMIRQLAPGM VQQMQSVCSD CNGEXXXXXX XXXXXXXXXX BACU001893/1-254 C--------- VYFGNLA--- ---------- ---------- ---------- bmy_11963T0/1-454 CSACRGRGVR IMIRQLAPGM VQQMQSVCSD CNGEGEVINE KDRCKKCEGK ENSP00000314030/1-412 CSACRGRGVR IMIRQLAPGM VQQMQSVCSD CNGEGEVINE KDRCKKCEGK ENSBTAP00000004890/1-412 CSACRGRGVR IMIRQLAPGM VQQMQSVCSD CNGEGEVINE KDRCKKCEGK 251 300 ENSTTRP00000011515/1-388 XXXXXXXXXX XXVDKGMKHG QRITFTGEA- QAPGV-SGDI VLLLQEKEHE BACU001893/1-254 ---------- ---------- ---------- ---------I IVHLYSKEPQ bmy_11963T0/1-454 KVIKEVKILE VHVDKGMKHG QRITFTGEAD QAPGVEPGDI VLLLQEKEHE ENSP00000314030/1-412 KVIKEVKILE VHVDKGMKHG QRITFTGEAD QAPGVEPGDI VLLLQEKEHE ENSBTAP00000004890/1-412 KVIKEVKILE VHVDKGMKHG QRITFTGEAD QAPGVEPGDI VLLLQEKEHE 301 350 ENSTTRP00000011515/1-388 --VFQRDGND LHMTYKIGLV EALCGFQFTF KHLDGRQIVV KYPPGKVIEP BACU001893/1-254 WWVFQRDGND LHMTYKIGLV EALCGFQFTF KHLDGRQIVV KYPPGKVIEP bmy_11963T0/1-454 --VFQRDGND LHMTYKIGLV EALCGFQFTF KHLDGRQIVV KYPPGKVIEP ENSP00000314030/1-412 --VFQRDGND LHMTYKIGLV EALCGFQFTF KHLDGRQIVV KYPPGKVIEP ENSBTAP00000004890/1-412 --VFQRDGND LHMTYKIGLV EALCGFQFTF KHLDGRQIVV KYPPGKVIEP 351 400 ENSTTRP00000011515/1-388 GCVRVVRGEG MPQYRNPFEK GDLYIKFDVQ FPENNWINPD KLSELEDLLP BACU001893/1-254 GCVRVVRGEG MPQYRNPFEK GDLYIKFDVQ FPENNWINPD KLSELEDLLP bmy_11963T0/1-454 GCVRVVRGEG MPQYRNPFEK GDLYIKFDVQ FPENNWINPD KLSELEDLLP ENSP00000314030/1-412 GCVRVVRGEG MPQYRNPFEK GDLYIKFDVQ FPENNWINPD KLSELEDLLP ENSBTAP00000004890/1-412 GCVRVVRGEG MPQYRNPFEK GDLYIKFDVQ FPENNWINPD KLSELEDLLP 401 450 ENSTTRP00000011515/1-388 SRPEVPNIIG DTEEVELQEF DSTRGSGGGQ RREAYNDSSD EESSSHHGPG BACU001893/1-254 SRPEVPNIIG DTEEVELQEF DSTRGSGGGQ RREAYNDSSD EESSSHHGPG bmy_11963T0/1-454 SRPEVPNIIG DTEEVELQEF DSTRGSGGGQ RREAYNDSSD EESSSHHGPG ENSP00000314030/1-412 SRPEVPNIIG ETEEVELQEF DSTRGSGGGQ RREAYNDSSD EESSSHHGPG ENSBTAP00000004890/1-412 SRPEVPNIIG DTEEVELQEF DSTRGSGGGQ RREAYNDSSD EESSSHHGPG 451 500 ENSTTRP00000011515/1-388 VQCAHQ BACU001893/1-254 VQCAHQ bmy_11963T0/1-454 VQCAHQ ENSP00000314030/1-412 VQCAHQ ENSBTAP00000004890/1-412 VQCAHQ