KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:06 2014 Check: 00 .. Name: BACU016371/1-175 Len: 396 Check: 8716 Weight: 1.00 Name: ENSBTAP00000004896/1-353 Len: 396 Check: 908 Weight: 1.00 Name: ENSP00000261837/1-395 Len: 396 Check: 7812 Weight: 1.00 Name: ENSTTRP00000004413/1-395 Len: 396 Check: 4274 Weight: 1.00 Name: bmy_20428T0/1-324 Len: 396 Check: 8379 Weight: 1.00 // 1 50 BACU016371/1-175 MCDQTFLVNV FGSCDKCFKQ RALRPVFKKS QQLSYCSL-- ---------- ENSBTAP00000004896/1-353 ---------- ---------- ---------- ---------- ---MAADGLH ENSP00000261837/1-395 MCDQTFLVNV FGSCDKCFKQ RALRPVFKKS QQLSYCSTCA EI-MATEGLH ENSTTRP00000004413/1-395 MCDQTFLVNV FGSCDKCFKQ RALRPVFKKL XXXXXXXXXX XXXMATDGLH bmy_20428T0/1-324 ---------- ---------- ---------- ---------- ---MATDGLH 51 100 BACU016371/1-175 ---------- ---------- ---------- LHQVAERVEA LGQFVMKTRR ENSBTAP00000004896/1-353 ENETLASLKS EAESLKGKLE EERAKLHDVE LHQVAERVEA LGQFVMKTRR ENSP00000261837/1-395 ENETLASLKS EAESLKGKLE EERAKLHDVE LHQVAERVEA LGQFVMKTRR ENSTTRP00000004413/1-395 ENETLASLKS EAESLKGKLE EERAKLHDVE LHQVAERVEA LGQFVMKTRR bmy_20428T0/1-324 ENETLASLKS EAESLKGKLE EERAKLHDVE LHQVAERVEA LGQFVMKTRR 101 150 BACU016371/1-175 TLKGHGNKVL CMDWCKDKRR IVSSSQ---- ---------- ---------- ENSBTAP00000004896/1-353 TLKGHGNKVL CMDWCKDKRR LVSSSQDGKV IVWDSFTTNK EHAVTMPCTW ENSP00000261837/1-395 TLKGHGNKVL CMDWCKDKRR IVSSSQDGKV IVWDSFTTNK EHAVTMPCTW ENSTTRP00000004413/1-395 TLKGHGNKVL CMDWCKDKRR IVSSSQDGKV IVWDSFTTNK EHAVTMPCTW bmy_20428T0/1-324 TLKGHGNKVL CMDWCKDKRR IVSSSQ---- ---------- EHAVTMPCTW 151 200 BACU016371/1-175 ------VRHT CRVMVGXXXX XXXXXK---- ------SRPF QKTLSECYVS ENSBTAP00000004896/1-353 VMACAYAPSG CAIACGGLDN KCSVYPLTFD KNENMAAKKK SVAMHTNYLS ENSP00000261837/1-395 VMACAYAPSG CAIACGGLDN KCSVYPLTFD KNENMAAKKK SVAMHTNYLS ENSTTRP00000004413/1-395 VMACAYAPSG CAIACGGLDN KCSVYPLTFD KNENMAAKK- SVAMHTNYLS bmy_20428T0/1-324 VMACAYAPSG CAIACGGLDN KCSVYPLTFD KNENMAAKKK SVAMHTNYLS 201 250 BACU016371/1-175 ACAPKDTSYL V--------- ---------- ---------- ---------K ENSBTAP00000004896/1-353 ACSFTNSDMQ ILTASGDGTC ALWDVESGQL LQSFHGHGAD VLCLDLAPSE ENSP00000261837/1-395 ACSFTNSDMQ ILTASGDGTC ALWDVESGQL LQSFHGHGAD VLCLDLAPSE ENSTTRP00000004413/1-395 ACSFTNSDMQ ILTASGDGTC ALWDVESGQL LQSFHGHGAD VLCLDLAPSE bmy_20428T0/1-324 ACSFTNSDMQ ILTASGDGTC ALWDVESGQL LQSFHGHGAD VLCLDLAPSE 251 300 BACU016371/1-175 NSLAYL---- -KTSLIW--- ---------- VDLELVKQKY Y--------- ENSBTAP00000004896/1-353 TGNTFVSGGC DKKAMVWDMR SGQCVQAFET HESDINSVRY YPSGDAFASG ENSP00000261837/1-395 TGNTFVSGGC DKKAMVWDMR SGQCVQAFET HESDINSVRY YPSGDAFASG ENSTTRP00000004413/1-395 TGNTFVSGGC DKKAMVWDMR SGQCVQAFET HESDINSVRY YPKRDAFASG bmy_20428T0/1-324 TGNTFVSGGC DKKAMVWDMR SGQCVQAFET HESDINSVR- ---------- 301 350 BACU016371/1-175 ------KLY- ---------L TDHSKIF--- ---------- -F-------- ENSBTAP00000004896/1-353 SDDATCRLYD LRADREVAIY SKESIIFGAS SVDFSLSGRL LFAGYNDYTI ENSP00000261837/1-395 SDDATCRLYD LRADREVAIY SKESIIFGAS SVDFSLSGRL LFAGYNDYTI ENSTTRP00000004413/1-395 SDDATCRLYD LRADREVAIY SKESIIFGAS SVDFSLSGRL LFAGYNDYTI bmy_20428T0/1-324 ----SCRLYD LRADREVAIY SKESIIFGAS SVDFSLSGRL LFAGYNDYTI 351 400 BACU016371/1-175 ---------- LSIFQGLI-- ---------- ---CK----- ------ ENSBTAP00000004896/1-353 NVWDVLKGSR VSILFGHENR VSTLRVSPDG TAFCSGSWDH TLRVWA ENSP00000261837/1-395 NVWDVLKGSR VSILFGHENR VSTLRVSPDG TAFCSGSWDH TLRVWA ENSTTRP00000004413/1-395 NVWDVLKGSR VSILFGHENR VSTLRVSPDG TAFCSGSWDH TLRVWA bmy_20428T0/1-324 NVWDVLKGSR VSILFGHENR VSTLRVSPDG TAFCSGSWDH TLRVWA