KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:09 2014 Check: 00 .. Name: ENSP00000411584/1-278 Len: 279 Check: 624 Weight: 1.00 Name: ENSBTAP00000004915/1-277 Len: 279 Check: 9248 Weight: 1.00 Name: ENSTTRP00000013726/1-241 Len: 279 Check: 5596 Weight: 1.00 Name: bmy_05446T0/1-256 Len: 279 Check: 972 Weight: 1.00 Name: BACU004139/1-256 Len: 279 Check: 1032 Weight: 1.00 // 1 50 ENSP00000411584/1-278 -MVRGAGPGP SLSALSHPTG ASGMAAAEGP GYLVSPQAEK HRRARNWTDA ENSBTAP00000004915/1-277 AVCRPRRPAP --SALFNPTG APGMATAEVP GYLVSPQAEK HRRARNWTDA ENSTTRP00000013726/1-241 -VVRRPRPGP --SALFNPAG DPGMAAAEVP GYLVSSQTEK HRRARNWTDA bmy_05446T0/1-256 ---------- ---------- ---MAAAEVP GYLVSPQTEK HRRARNWTDA BACU004139/1-256 ---------- ---------- ---MAAAEVP GYLVSPQTEK HRRARNWTDA 51 100 ENSP00000411584/1-278 EMRGLMLVWE EFFDELKQTK RNAKVYEKMA SKLFEMTGER RLGEEIKIKI ENSBTAP00000004915/1-277 EMRGLMLVWE EFFDELKQTK RNAKVYEKMA SKLLEMTGER RLGEEIKIKI ENSTTRP00000013726/1-241 EMRGLMLVWE EFFDELKQTK RNAKVYEKMA SKLLEMTGER RLGEEIKIKI bmy_05446T0/1-256 EMRGLMLVWE EFFDELKQTK RNAKVYEKMA SKLLEMTGER RLGEEIKIKI BACU004139/1-256 EMRGLMLVWE EFFDELKQTK RNAKVYEKMA SKLLEMTGER RLGEEIKIKI 101 150 ENSP00000411584/1-278 TNMTFQYRKL KCMTDSESAP PDWPYYLAID GILAKVPESC DGKLPDSQPP ENSBTAP00000004915/1-277 TNMTFQYRKL KCMTDSESVP PDWPYYLAID RILAKVPESC DGKLPDGQQP ENSTTRP00000013726/1-241 TNMTFQYRKL KCMTDSESVP PDWPYYLAID RILAKVPESC DGKLPDGQQP bmy_05446T0/1-256 TNMTFQYRKL KCMTDSESVP PDWPYYLAID RILAKVPESC DGKLPDGQQP BACU004139/1-256 TNMTFQYRKL KCMTDSESVP PDWPYYLAID RILAKVPESC DGKLPDGQQP 151 200 ENSP00000411584/1-278 GPSTSQTEAS LSPPAKSTPL YFPYNQCSYE GRFEDDRSDS SSSLLSLKFR ENSBTAP00000004915/1-277 GPSTSQTEAS LSPSAKSAPL YLPYNHCSYE GRFQDDGSDS ASSLLSLKFR ENSTTRP00000013726/1-241 GPSTSQTEAS LSPSAKSTPL YLPYKQCSYE GRFQDDGSAS SSSLLSLKFR bmy_05446T0/1-256 GPSTSQTEAS LSPSAKSTPL YLPYNQCSYE GRFQDDGSAS SSSLLSLKFR BACU004139/1-256 GPSTSQTEAS LSPSAKSTPL YLPYNQCSYE GRFQDDGSAS SSSLLSLKFR 201 250 ENSP00000411584/1-278 SEERPVKKRK VQSCHLQKKQ LRLLEAMVEE QRRLSRAVEE TCREVRRVLD ENSBTAP00000004915/1-277 SEERPVKKRK GQGGHLQRKK LRLLEALLEE QRRLSRALEE TCREVRRALD ENSTTRP00000013726/1-241 SDERPVKKRK GQGGHLQRKK LRLLETMLEE QRRLSRALEE TCRE------ bmy_05446T0/1-256 SDERPVKKRK GQGGHLQRKK LRLLETMLEE QRRLSRALEE TCREVRRGLD BACU004139/1-256 SDKRPVKKRK GQGGHLQRKK LRLLETMLEE QRRLSRALEE TCREVRRGLD 251 300 ENSP00000411584/1-278 QQHILQVQSL QLQERMMSLL ERIITKSSV ENSBTAP00000004915/1-277 QHSVLQAQSL QLQERMMSLL ERIIAKSGV ENSTTRP00000013726/1-241 ---------- ---------- --------- bmy_05446T0/1-256 QHSLLQAQGL QLQERMMSLL EKIIAKSGV BACU004139/1-256 QHSLLQAQGL QLQERMMSLL EKIIAKSGV