KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:25:12 2014 Check: 00 .. Name: ENSP00000383558/1-477 Len: 510 Check: 53 Weight: 1.00 Name: ENSBTAP00000004926/1-479 Len: 510 Check: 4598 Weight: 1.00 Name: bmy_02256T0/1-494 Len: 510 Check: 2388 Weight: 1.00 Name: BACU011623/1-451 Len: 510 Check: 9215 Weight: 1.00 // 1 50 ENSP00000383558/1-477 MPPCQPQRPL LLLLLLLACQ PQVPSAQVMD FLFEKWKLYG DQCHHNLSLL ENSBTAP00000004926/1-479 MPPIQPHYPH LFLLLLLACQ PETPSAQVMD FLFEKWKLYG DQCLHNLSLL bmy_02256T0/1-494 MPPILPRCPH LLLLLLLACQ PQAPSAQVMD FLFEKWKLYG DQCLHNLSLL BACU011623/1-451 ---------- ---------- --------MD FLFEKWKLYG DQCLHNLSLL 51 100 ENSP00000383558/1-477 PPPTELVCNR TFDKYSCWPD TPANTTANIS CPWYLPWHHK VQHRFVFKRC ENSBTAP00000004926/1-479 PLPTELVCNR TFDKYSCWPD TPPNTTANIS CPWYLPWYHK VQHRLVFKRC bmy_02256T0/1-494 PPATELVCNR TFDKYSCWPD TPPNTTANIS CPWYLPWHHK VQHRLVFKRC BACU011623/1-451 PPPTELVCNR TFDKYSCCPA PPPNTTANIS CPWYLPWHHK VQHRLVFKRC 101 150 ENSP00000383558/1-477 GPDGQWVRGP RGQPWRDASQ CQMDGEEIEV QKEVAKMYSS FQVMYTVGYS ENSBTAP00000004926/1-479 GPDGQWVRGP RGQPWRDASQ CQMDDEELEV QKEVAKMYSS FQVMYTVGYS bmy_02256T0/1-494 GPDGQWVRGP RGQPWRNASQ CQMDDKELEV QKEVAKMYSS FQVMYTVGYS BACU011623/1-451 GPDGQWVRGP RGQPWRNASQ CQMDDKELEV QKEVAKMYSS FQVMYTVGYS 151 200 ENSP00000383558/1-477 LSLGALLLAL AILGGLSKLH CTRNAIHANL FASFVLKASS VLVIDGLLRT ENSBTAP00000004926/1-479 LSLGALLLAL TTLLGLSKLH CTRNYIHMNL FVSFMLKASS VLVIDTLLKT bmy_02256T0/1-494 LSLGALLLAL AILLGLSKLH CTRNYIHVNL FASFVLKASS VLVIDTLLKT BACU011623/1-451 LSLGALLLAL AILLGLSKLH CTRNYIHVNL FASFVLKASS VLVIDTLLKT 201 250 ENSP00000383558/1-477 RYSQKIGDDL SVSTWLSDG- ---------- ---------- --------AV ENSBTAP00000004926/1-479 RYSQRIGDDI SVSVWLSDG- ---------- ---------- --------AV bmy_02256T0/1-494 RYSQRIGDDL SVSIWLSDGV SSQIRPLGLW ALGGRQLGGP HSCCPRGQAV BACU011623/1-451 RYSQRIGDDL SVSIWLSDG- ---------- ---------- --------AV 251 300 ENSP00000383558/1-477 AGCRVAAVFM QYGIVANYCW LLVEGLYLHN LLGLATLPER SFFSLYLGIG ENSBTAP00000004926/1-479 AGCRVAAVFM QYGVVANYCW LLVEGVYLHS LLSLAAIPER SCFPLYLGIG bmy_02256T0/1-494 AGCRVAAVFM QYGVVANYCW LLVEGVYLHS LLGFATIPER SCFPLYLGIG BACU011623/1-451 AGCRVAAVFM QYGVVANYCW LLVEGVYLHS LLGFATIPER SCFPLYLGIG 301 350 ENSP00000383558/1-477 WGAPMLFVVP WAVVKCLFEN VQCWTSNDNM GFWWILRFPV FLAILINFFI ENSBTAP00000004926/1-479 WGAPMLFVIP WAVVKCLFEN IQCWTSNDNM AFWWILRFPV FLAILINFFI bmy_02256T0/1-494 WGAPMLFVTP WVVVKCLFEN IQCWTSNDNM GFWWILRFPV FLAILINFFI BACU011623/1-451 WGAPMLFVTP WVVVKCLFEN IQCWTSNDNM GFWWILRFPV FLAILINFFI 351 400 ENSP00000383558/1-477 FVRIVQLLVA KLRARQMHHT DYKFRLAKST LTLIPLLGVH EVVFAFVTDE ENSBTAP00000004926/1-479 FIRILHLLVA KLRAHQMRYT DYKFRLAKST LTLIPLLGVH EVVFAFVTDE bmy_02256T0/1-494 FIRILHLLVA KLRAHQMRYT DYKFRLAKST LTLIPLLGVH EVVFAFVTDE BACU011623/1-451 FIRILHLLVV KLRAHQMRYT DYKFRLAKST LTLIPLLGVH EVVFAFVTDE 401 450 ENSP00000383558/1-477 HAQGTLRSAK LFFDLFLSSF QGLLVAVLYC FLNKEVQSEL RRRWHRWRLG ENSBTAP00000004926/1-479 HAQGTLRSAK LFFDLFLSSF QGLLVAILYC FLNKEVQSEL LRHWHRWREG bmy_02256T0/1-494 HAQGTLRSAK LFFDLFLSSF Q--------- -----VQSEL LRRWHRWREG BACU011623/1-451 HAQGTLRSAK LFFDLFLSSF QGLLVAVLYC FLNKEVQSEL LRRWHRWREG 451 500 ENSP00000383558/1-477 KVLWEERNTS NHRASSSPGH GPPSKELQFG RGGGS----Q DSSAETPLAG ENSBTAP00000004926/1-479 KALQEERHTG SH--TTRPLR GPPSKKLLLA RGSSSNGTGQ DASAETCLAG bmy_02256T0/1-494 KALQEERHVG SH--TARPTG GPPSEKLLLS RGGGSNRTSQ DPSAETHLAG BACU011623/1-451 KALQEERHVG SH--TARPTG GPPSEKLLLS RGGGSNRTSQ DPSAETHLAG 501 550 ENSP00000383558/1-477 GLPRLAESPF ENSBTAP00000004926/1-479 GLPGSAENPQ bmy_02256T0/1-494 GLPGLAENPF BACU011623/1-451 SLPGLAENPF