KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:15 2014 Check: 00 .. Name: ENSP00000379263/1-490 Len: 491 Check: 38 Weight: 1.00 Name: ENSBTAP00000004942/1-490 Len: 491 Check: 9979 Weight: 1.00 Name: ENSTTRP00000003452/1-490 Len: 491 Check: 4321 Weight: 1.00 Name: bmy_10728T0/1-491 Len: 491 Check: 315 Weight: 1.00 Name: BACU005227/1-489 Len: 491 Check: 4211 Weight: 1.00 // 1 50 ENSP00000379263/1-490 MERVGCTLTT TYAHPRPTPT NFLPAISTMA SSYRDRFPHS NLTHSLSLPW ENSBTAP00000004942/1-490 MELLGSTLTA TYAHPSPTPT NFLPAISTMA STYRDRFPHY NLTHSLSLPW ENSTTRP00000003452/1-490 MELLGSTLAA PYAHPRPTPA NFLPAISAMA SSYRNCFPHC NLTHSLSLPW bmy_10728T0/1-491 MELLGSTLAA TYAHPRPTPA NFLPAISAMA SSYRDCFPHC NLTHSLSLPW BACU005227/1-489 MELLGSTLAA TYAHPRPTPA NFLPAISAMA SSYRDCFPHC NLTRSLSLPW 51 100 ENSP00000379263/1-490 RPSTYYKVAS NSPSVAPYCT RSQRVSENTM LPFVSNRTTF FTRYTPDDWY ENSBTAP00000004942/1-490 RPSTYYKAAS NWPTLDPYCT RSQRVSESTM LPFVSNRTTL FTRYTPDDWY ENSTTRP00000003452/1-490 RPSTYYKAAS NSPALDPCCT RSQRVSESTT LPCVSNRTTL FTRYTPDDWY bmy_10728T0/1-491 RPSTYYKAAS SSPALDPYCT RPQRVSESTT LPFVSNRTTL FTRYTPDDWY BACU005227/1-489 RPSSYYKAAS NSPALDPYCT RSQRVSESTT LPFVSNRTTL FTRYTPDDWY 101 150 ENSP00000379263/1-490 RSNLTNYQES NTSRHNSEKL RVDTSRLIQD KYQQTRKTQA DTTQNLGERV ENSBTAP00000004942/1-490 RSNLTNFQES NTSRHNSERL RVDTSRLIQD KYQQTRKTQA DSTQNLGERV ENSTTRP00000003452/1-490 RSNLANFQES NTSRHNSERL RVDTSRLIQD KYQQTRKTQA DSTHNLGERV bmy_10728T0/1-491 RSNLTNFQES NTSRHNSERL RIDTSRLIQD KYQQTRKTQA DSTQNLGERV BACU005227/1-489 RSNLTNFQES NASRHNSERL RIDTSRLIQD KYQQTRKTQA DSTQNLGERV 151 200 ENSP00000379263/1-490 NDIGFWKSEI IHELDEMIGE TNALTDVKKR LERALMETEA PLQVARECLF ENSBTAP00000004942/1-490 NDIGFWKSEI IHELDAMIGE TNKLTDIKKR LERALMETEA PLQVARECLF ENSTTRP00000003452/1-490 NDIGFWKSEI IHELDAMIGE TNELTDVKKK LERALMETEA PLQVARECLS bmy_10728T0/1-491 NDIGFWKSEI THELDAMIGE TNELTDIKKK LERALMETEA PLQVARECLF BACU005227/1-489 NDIGFWKSEI THELDAMIGE TNELTDIKKK LERALMETEA PLQVARECLF 201 250 ENSP00000379263/1-490 HREKRMGIDL VHDEVEAQLL TEVDTILCCQ ERMKLHLDKA IAQLAANRAS ENSBTAP00000004942/1-490 HREKRMGIDL VHDEVEKELL TEVDIILCCQ ERMKLYLDKA IAQLAANRAA ENSTTRP00000003452/1-490 HREKRMGIDL VHDEVEKELL TEVDIILCCQ ERMKLHLDKA IAQLAANRAS bmy_10728T0/1-491 HREKRMGIDL VHDEVETELL MEVDIILCCQ ERMKLHLDKA IAQLAANRAS BACU005227/1-489 HREKRMGIDL VHDEVETELL MEVDIILCCQ ERMKLHLDKA IAQLAANRAS 251 300 ENSP00000379263/1-490 QHELEKDLSD KQTAYRIDDK CHHLRNTSDG VGYFRGVERV DA-TVSVPES ENSBTAP00000004942/1-490 QHELEKDLSD KQSAYRIDDK CHHLRNTSDG VSYFRGVERV DA-TVSVPES ENSTTRP00000003452/1-490 QHELEKDLSD KQAACRIDDK CHHLRNTSDG VSYFCGVERV NA-MVSVPES bmy_10728T0/1-491 QHELEKDLSD KQAAYRIDDK CHHLRNTSDG VSYFRGVERD AAHRVSVPES BACU005227/1-489 QHELEKDLSG KQAAYRIDDK CHHLRNTSDG VSYFRGVERV DA-MVSVPES 301 350 ENSP00000379263/1-490 WAKFTDDNIL RSQSERAASA KLRDDIENLL VVTANEMWNQ FNKVNLSFTN ENSBTAP00000004942/1-490 WAKFTDDNIL RSQSERAASA KLRDDIQNVL VVTANEMWNQ FNKVNLAFTN ENSTTRP00000003452/1-490 WAKFTHDNIL RSQSERAASA KLRDDIQNLL VVTANEMWNQ FNKVNLAFTS bmy_10728T0/1-491 WAKLTDDNIL RSQSERAASA KLRDDVQNLL VVTANEMWNQ FNKVNLAFTS BACU005227/1-489 WAKLTDDNIL RSQSERAASA KLRDDVQNLL VVTANEMWNQ FNKVNLAFTS 351 400 ENSP00000379263/1-490 RIAETADAKN KIQTHLAKTL QEIFQTEMTI ESIKKAIKDK TAFLKVAQTR ENSBTAP00000004942/1-490 RIAETADAKN KIQTHLAKTL QEIFQTEMTI ESIKKAIVEK SAFLKVAQTR ENSTTRP00000003452/1-490 RIAETADAKN KIQIHLAKTL QEIFQTEMTI ESIKKAIEDK CAFLKVAQTR bmy_10728T0/1-491 RIAETADAKN KIQIHLAKTL QEIFQTEMTI ESIKKAIKDK SAFLKVAQTR BACU005227/1-489 RIAETADAKN KIQIHLAKTL QEIFQTEMTI ESIKKAIKDK SAFLKVAQTR 401 450 ENSP00000379263/1-490 LDERTRRPNI ELCRDMAQLR LVNEVHEVDD TIQTLQQRLR DAEDTLQSLV ENSBTAP00000004942/1-490 LDERTRRPNI ELCRDMAQLR LVNEVYEVDD TIQTLQQRLR DAEDTLQSLA ENSTTRP00000003452/1-490 LDERTRRPNI ELCRDTAQLR LVNEVYEVDD TIQTLQQRLR DAQDTLQSLV bmy_10728T0/1-491 LDERTRRPNI ELCRDMAQLR LVNEVYEVDD TIQTLQQRLR DAEDTLQSLV BACU005227/1-489 LDERTRRPNI ELCRDMAQLR LVNEVYEVDD TIQTLQQRLR DAEDTLQSLV 451 500 ENSP00000379263/1-490 HIKATLEYDL AVKANSLYID QEKCMSMRKS YPNTLRLVGF C ENSBTAP00000004942/1-490 HTKATLEHDL AVKANSLYID QDKCMSMRRS FPSTLRLVGF C ENSTTRP00000003452/1-490 HTKATLEHDL AVKANSLYID QEKCMSMRRS FPSTRRLVGF C bmy_10728T0/1-491 HTKATLEYDL AVKANSLYID QEKCMSMRRS FPSARRLVGF C BACU005227/1-489 HSKATLEHDL AVKANSLYID QEKCVSMRRS FPSARRLAGF -