KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:17 2014 Check: 00 .. Name: bmy_18503T0/1-428 Len: 442 Check: 2856 Weight: 1.00 Name: ENSP00000355467/1-429 Len: 442 Check: 1636 Weight: 1.00 Name: ENSTTRP00000013451/1-424 Len: 442 Check: 2608 Weight: 1.00 Name: BACU001647/1-429 Len: 442 Check: 5165 Weight: 1.00 Name: ENSBTAP00000004949/1-429 Len: 442 Check: 1546 Weight: 1.00 // 1 50 bmy_18503T0/1-428 ---MQR---- --LGQS---- ELCRTNNEAE DGPPPAAASP ASTQASRARA ENSP00000355467/1-429 MATEQRPFHL VVFGASGFTG QFVTEEVARE QVDPERSSRL PWAVAGRSRE ENSTTRP00000013451/1-424 MATQQRPFHL VVFGASGFTG QFVTEEVARE QMSPERSSRL PWAVAGRSRE BACU001647/1-429 MATQQRPFHL VVFGASGFTG QFVTEEVARE LVSPEWSSRL PWAVAGRSRE ENSBTAP00000004949/1-429 MATQQRPFHL VVFGASGFTG QFVTEEVARE QVSPERTSHL PWAVAGRSRE 51 100 bmy_18503T0/1-428 ASSSA-GYTA EEEKEPTLSS EVGIIICDIT NPASLDEMAK QATVVLNCVG ENSP00000355467/1-429 KLQRVLEKAA LKLGRPTLSS EVGIIICDIA NPASLDEMAK QATVVLNCVG ENSTTRP00000013451/1-424 KLQRVLERAA MKLGRPTLSS EVGIIICDIT NPASLDEMAK QATVVLNCVG BACU001647/1-429 KLQRVLERAA VKLGRPTLSS EVGIIICDIT NPASLDEMAK QATVVLNCVG ENSBTAP00000004949/1-429 KLLRVLERAA MKLGRPTLSS EVGIIICDIT NPASLDEMAK QATVVLNCVG 101 150 bmy_18503T0/1-428 PKGEEDVEMR LWSQYRFYGE PVVKACVENG TSCIDICGEP QFLELMYWKY ENSP00000355467/1-429 P--------- ----YRFYGE PVIKACIENG ASCIDISGEP QFLELMQLKY ENSTTRP00000013451/1-424 P--------- ----YRFYGE PVVKACVENG TSCIDICGEP QFLELMYWKY BACU001647/1-429 P--------- ----YRFYGE PVVKACVENG TSYIDICGEP QFLELMYWKY ENSBTAP00000004949/1-429 P--------- ----YRFYGE PVIKACIENG TSCIDISGEP QFLELMYWKY 151 200 bmy_18503T0/1-428 HEKAAEKGAY IVGSSGFDSI PADLGVIYTR NKMNGTLTAV ESFLTIHSGP ENSP00000355467/1-429 HEKAADKGVY IIGSSGFDSI PADLGVIYTR NKMNGTLTAV ESFLTIHSGP ENSTTRP00000013451/1-424 HEKAAEKGAY IIGSSGFDSI PADLGVIYTR NKMNGTLTAV ESFLTIHSGP BACU001647/1-429 HEKAAEKGAY IVGSSGFDSI PADLGVIYTR NKMNGTLTAV ESFLTIHSGP ENSBTAP00000004949/1-429 HEKAAEKGVY IIGSSGFDSI PADLGVIYTR NKMNGTLTAV ESFLTISSGP 201 250 bmy_18503T0/1-428 EGLCIHDGTW KSAVYGFGDQ SNLKKLRNES NLKPVPIVGP KLKRRWPVSY ENSP00000355467/1-429 EGLSIHDGTW KSAIYGFGDQ SNLRKLRNVS NLKPVPLIGP KLKRRWPISY ENSTTRP00000013451/1-424 EGLCTHDGTW KSAVYGFGDQ SNLKKLRNES NLKPVPIVGP KLKRRWPISY BACU001647/1-429 EGLCIHDGTW KSAVYGFGDQ SNLKKLRNES NLKPVPIVGP KLKRRWPVSY ENSBTAP00000004949/1-429 EGLCVHDGTW KSAVYGFGDK SNLKKLRNES DMKPVPIVGP KLKRRWPISY 251 300 bmy_18503T0/1-428 CRELNSYSIP FLGADVSVVK RTQRYLHENL EQSPVQYAAY VTVGGVTSVI ENSP00000355467/1-429 CRELKGYSIP FMGSDVSVVR RTQRYLYENL EESPVQYAAY VTVGGITSVI ENSTTRP00000013451/1-424 CRELNSYSIP FLGADVSVVK RTQRYLHENL QQSPXXXXXX XXXXXXXXXX BACU001647/1-429 CRELNSYSIP FLGADVSVVK RTQRYLHENL EQSPVQYAAY VTVGGVTSVI ENSBTAP00000004949/1-429 CRELNSYSIP FLGADVSVVK RTQRYLHENL EQSPVQYAAY INVGGITSVI 301 350 bmy_18503T0/1-428 KLMFAGLFFL FFVKFGIGRQ LLIKFPWLFS FGYFSKQGPT QKQIDASSFT ENSP00000355467/1-429 KLMFAGLFFL FFVRFGIGRQ LLIKFPWFFS FGYFSKQGPT QKQIDAASFT ENSTTRP00000013451/1-424 XXXXXXXXXX XXXKFG-GRQ -FIKVPWLFS -GYF-KQGPT QKQIDASSFT BACU001647/1-429 KLMFAGLFFL FFVKFGIGRQ LLIKFPWLFS FGYFSKQGPT QKQIDASSFT ENSBTAP00000004949/1-429 KLMFAGLFFL FFVRFGIGRQ LLIKFPWLFS FGYFSKQGPT QKQIDASSFT 351 400 bmy_18503T0/1-428 LTFFGQGYSQ GFGPDKNKPN IRICTQVKGP EAGYVATPIA MVQAAITLLT ENSP00000355467/1-429 LTFFGQGYSQ GTGTDKNKPN IKICTQVKGP EAGYVATPIA MVQAAMTLLS ENSTTRP00000013451/1-424 LTFFGQGYSQ GFGPDKNKPN IRICTQVKGP EAGYVATPIA MVQAAITLLT BACU001647/1-429 LTFFGQGYSQ GFGPDKNKPN IRICTQVKGP EAGYVATPIA MVQAAITLLT ENSBTAP00000004949/1-429 MTFFGQGFSQ GVSPVKNKPN IRICTQVKGP EAGYVSTSIA MVQAAMILLN 401 450 bmy_18503T0/1-428 DTSDLPKAGG VFTPGAAFSR TKLIDRLNQR GIEFSVISSS EV ENSP00000355467/1-429 DASHLPKAGG VFTPGAAFSK TKLIDRLNKH GIEFSVISSS EV ENSTTRP00000013451/1-424 DTSDLP-AGG VFTPGAAFSR TKLIDRLNQR GIEFSVISSS EV BACU001647/1-429 DASDLPKAGG VFTPGAAFSR TKLIDRLNQR GIEFSVISSS EV ENSBTAP00000004949/1-429 DASDLPKAGG VFTPGAAFSR TKLIDRLNEH GIEFSVISST EV