KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:25:23 2014 Check: 00 .. Name: ENSP00000400839/1-412 Len: 412 Check: 6481 Weight: 1.00 Name: ENSBTAP00000004988/1-411 Len: 412 Check: 5861 Weight: 1.00 Name: bmy_08881T0/1-412 Len: 412 Check: 7780 Weight: 1.00 Name: BACU003173/1-412 Len: 412 Check: 8379 Weight: 1.00 // 1 50 ENSP00000400839/1-412 MDTSPSRKYP VKKRVKIHPN TVMVKYTSHY PQPGDDGYEE INEGYGNFME ENSBTAP00000004988/1-411 MDTSPSKKYP VKKRVKIHPN TVMVKYTSHY PQPGDGGYEE INEDYGSFME bmy_08881T0/1-412 MDTSPSKKYP VKKRVKIHPN TVMVKYTSHY PQPGDDGYEE INEDYGNFME BACU003173/1-412 MDTSPSKKYP VKKRVKIHPN TVMVKYTSHY PQPGDDGYEE INEDYGNFME 51 100 ENSP00000400839/1-412 ENPKKGLLSE MKKKGRAFFG TMDTLPPPTE DPMINEIGQF QSFAEKNIFQ ENSBTAP00000004988/1-411 ENSKKGLLSE MKRKGRTFFG TMDT-CPPTE DPVTNEIGQF QSFAEKNIFQ bmy_08881T0/1-412 ENPKKGLLSE MKRKGRTFFG TMDTQHPPTE DPMTNEIGQF QSFAEKNIFQ BACU003173/1-412 ENPKKGLLSE MKRKGRTFFG TMDTQHPPTE DPMTNEIGQF QNFAEKNIFQ 101 150 ENSP00000400839/1-412 SRKMWIVLFG SALAHGCVAL ITRLVSDRSK VPSLELIFIR SVFQVLSVLV ENSBTAP00000004988/1-411 SRKMWIVLFG SALAHGCVAL ITRLVSDRSK VPSLELIFIR SVLQVLSVLV bmy_08881T0/1-412 SRKMWIVLFG SALAHGCVAL ITRLVSDRSK VPSLELIFIR SVLQVLSVLV BACU003173/1-412 SRKMWIVLFG SALAHGCVAL ITRLVSDRSK VPSLELIFIR SVLQVLSVLV 151 200 ENSP00000400839/1-412 VCYYQEAPFG PSGYRLRLFF YGVCNVISIT CAYTSFSIVP PSNGTTMWRA ENSBTAP00000004988/1-411 VCYYQEAPFG PSGYRLRLFF YGVCNVISIT CAYTSFSIVP PSNGTTMWRA bmy_08881T0/1-412 VCYYQEAPFG PSGYRLRLFF YGVCNVISIT CAYTSFSIVP PSNGTTMWRA BACU003173/1-412 VCYYQESPFG PSGYRLRLFF YGVCNVISIT CAYTSFSIVP PSNGTTMWRA 201 250 ENSP00000400839/1-412 TTTVFSAILA FLLVDEKMAY VDMATVVCSI LGVCLVMIPN IVDEDNSLLN ENSBTAP00000004988/1-411 TTTVFSGILA FLLVDEKMAC VDMATVVCSI VGVCLVMIPN IVDEDDSLLN bmy_08881T0/1-412 TTTVFSAILA FLLVDEKMAY VDTATVVCSI LGVCLVMIPN IVDEDNSLLN BACU003173/1-412 TTTVFSAILA FLLVDEKMAY VDTATVVCSI LGVCLVMIPN IVDEDNSLLN 251 300 ENSP00000400839/1-412 AWKEAFGYTM TVMAGLTTAL SMIVYRSIKE KISMWTALFT FGWTGTIWGI ENSBTAP00000004988/1-411 AWKEAFGYTM TVMAGLTTAL SMIVYRSIKE KISMWTALFT FGWTGTVWGI bmy_08881T0/1-412 AWKEAFGYTM TVMAGLTTAL SMIVYRSIKE KISMWTALFT FGWTGTVWGV BACU003173/1-412 AWKEAFGYTM TVMAGLTTAL SMIVYRSIKE KISMWTALFT FGWTGTVWGV 301 350 ENSP00000400839/1-412 STMFILQEPI IPLDGETWSY LIAICVCSTA AFLGVYYALD KFHPALVSTV ENSBTAP00000004988/1-411 STMFVLQEPI IPLDGETWSY LIAICICSTA AFLGVYYALD KFHPALVSTV bmy_08881T0/1-412 STMFVLQEPI IPLDGETWSY LIAICICSTA AFLGVYYALD KFHPALVSTV BACU003173/1-412 STMFVLQEPI IPLDGETWSY LIAICICSTA AFLGVYYALD KFHPALVSTV 351 400 ENSP00000400839/1-412 QHLEIVVAMV LQLLVLHIFP SIYDVFGGVI IMISVFVLAG YKLYWRNLRK ENSBTAP00000004988/1-411 QHLEIVVAMV LQLLVLHIFP SVYDVFGGVI IMISVFVLAG YKLYWRNLRR bmy_08881T0/1-412 QHLEIVVAMV LQLLVLHIFP SVYDVFGGVI IMISVFVLAG YKLYWRNLRR BACU003173/1-412 QHLEIVVAMV LQLLVLHIFP SVYDVFGGVI IMISVFVLAG YKLYWRNLRR 401 450 ENSP00000400839/1-412 QDYQEILDSP IK ENSBTAP00000004988/1-411 QDYQEILDSP IK bmy_08881T0/1-412 QDYQEILDSP IK BACU003173/1-412 QDYQEILDSP IK