KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:27 2014 Check: 00 .. Name: ENSP00000362153/1-731 Len: 773 Check: 6102 Weight: 1.00 Name: ENSBTAP00000005018/1-732 Len: 773 Check: 8759 Weight: 1.00 Name: ENSTTRP00000008153/1-732 Len: 773 Check: 8505 Weight: 1.00 Name: bmy_02124T0/1-744 Len: 773 Check: 6142 Weight: 1.00 Name: BACU009686/1-670 Len: 773 Check: 6898 Weight: 1.00 // 1 50 ENSP00000362153/1-731 ---------- ---------- ---------- -------MVK PKYKGRSTIN ENSBTAP00000005018/1-732 ---------- ---------- ---------- -------MVK PKYKGRSTIN ENSTTRP00000008153/1-732 ---------- ---------- ---------- -------MVK PKYKGRSIIN bmy_02124T0/1-744 RGPAWFGRVV SARLGKLRDL LPHVGRTQRS GPRPVGKMVK PKYKGRSTIN BACU009686/1-670 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362153/1-731 PSKASTNPDR VQGAGGQNMR DRATIRRLNM YRQKERRNSR GKIIKPLQYQ ENSBTAP00000005018/1-732 PSNASTNPDR VQGAGGHNMR DRATIRRLNM YRQKERRNSR GKVIKPLQYQ ENSTTRP00000008153/1-732 LSKSTNL--R VEGAGGQNMR DRATIRRLNM YRQKERRNSR GKVIKPLQYQ bmy_02124T0/1-744 PSKASTNPDR VQGAGGQNMR DRATIRRLNM YRQKERRNSR GKVIKPLQYQ BACU009686/1-670 ---------- --------MR DRATIRRLNM YRQKERRNSR GKVIKPLQYQ 101 150 ENSP00000362153/1-731 STVASGTVAR VEPNIKWFGN TRVIKQSSLQ KFQEEMDTVM KDPYKVVMKQ ENSBTAP00000005018/1-732 STVASGTVAR VEPNIKWFGN TRVIKQSSLQ KFQEEMDTVL KDPYKVVMKQ ENSTTRP00000008153/1-732 STVASGTVAR VEPNIKWFGN TRVIKQSSLQ KFQEEMDTVL KDPYKVVMKQ bmy_02124T0/1-744 STVASGTVAR VEPNIKWFGN TRVIKQSSLQ KFQEEMDIIL KDPYKVVMKQ BACU009686/1-670 STVASGTVAR VEPNIKWFGN TRVIKQSSLQ KFQEEMDIVL KDPYKVVMKQ 151 200 ENSP00000362153/1-731 SKLPMSLLHD RIRPHNLKVH ILDTESFETT FGPKSQRKRP NLFASDMQSL ENSBTAP00000005018/1-732 SKLPMSLLHD RIRPHNAKVH ILDTESFETT FGPKAQRKRP NLFASDMQSL ENSTTRP00000008153/1-732 SKLPMSLLHD RIRPHNSKVH ILDTESFETT FGPKAQRKRP NLFASDMQSL bmy_02124T0/1-744 SKLPMSLLHD QIRPHNSKVH ILDTESFETT FGPKAQRKRP NLFASDMQSL BACU009686/1-670 SKLPMSLLHD RIRPHNSKVH ILDTESFETT FGPKAQRKRP NLFAGDMQSL 201 250 ENSP00000362153/1-731 IENAEMSTES YDQGKDRDLV TEDTGVRNEA QEEIYKKGQS KRIWGELYKV ENSBTAP00000005018/1-732 IENAETSTES YDQGKDRDLV AEDTGVRNEA QEEIFKKGQS KRIWGELYKV ENSTTRP00000008153/1-732 IENAEVSTES YDQGKDRDLV AEDTGV-NEA QEEIYKKGQS KRIWGELYKV bmy_02124T0/1-744 IENAEMSTES YDQGKDRDLV AEDTGVRYS- ---------- -------FKV BACU009686/1-670 IENAEMSTES YDQGKDRDLV AEDTG----- ---------- ---------V 251 300 ENSP00000362153/1-731 IDSSDVVVQV LDARDPMGTR SPHIETYLKK EKPWKHLIFV LNKCDLVPTW ENSBTAP00000005018/1-732 IDSSDVVVQV LDARDPVGTR SPHIETYLKK EKPWKHLIFV LNKCDLVPTW ENSTTRP00000008153/1-732 IDSSDVVVQV LDARDPMGTR SPHIETYLKK EKPWKHLIFV LNKCDLVPTW bmy_02124T0/1-744 IDSSDVVVQV LDARDPMGTR SPHIETYLKK EKPWKHLIFV LNKCDLVPTW BACU009686/1-670 IDSSDVVVQV LDARDPMGTR SPHIETYLKK EKPWKHLIFV LNKCDLVPTW 301 350 ENSP00000362153/1-731 ATKRWVAVLS QDYPTLAFHA SLTNPFGKGA FIQLLRQFGK LHTDKKQISV ENSBTAP00000005018/1-732 ATKRWVAVLS QDYPTLAFHA SLTNPFGKGA FIQLLRQFGK LHTDKKQISV ENSTTRP00000008153/1-732 ATKRWVAILS QDYPTLAFHA SLTNSFGKGA FIQLLRQFGK LHTDKKQISV bmy_02124T0/1-744 ATKRWVAILS QDYPTLAFHA SLTNPFGKGA FIQLLRQFGK LHTDKKQISV BACU009686/1-670 ATKRWVAILS QDYPTLAFHA SLTNPFGKGA FIQLLRQFGK LHTDKKQISV 351 400 ENSP00000362153/1-731 GFIGYPNVGK SSVINTLRSK KVCNVAPIAG ETKVWQYITL MRRIFLIDCP ENSBTAP00000005018/1-732 GFIGYPNVGK SSVINTLRSK KVCNVAPIAG ETKVWQYITL MRRIFLIDCP ENSTTRP00000008153/1-732 GFIGYPNVGK SSVINTLRSK KVCNVAPIAG ETKVWQYITL MRRIFLIDCP bmy_02124T0/1-744 GFIGYPNVGK SSVINTLRSK KVCNVAPIAG ETKVWQYITL MRRIFLIDCP BACU009686/1-670 GFIGYPNVGK SSVINTLRSK KVCNVAPIAG ETKVWQYITL MRRIFLIDCP 401 450 ENSP00000362153/1-731 GVVYPSEDSE TDIVLKGVVQ VEKIKSPEDH IGAVLERAKP EYISKTYKID ENSBTAP00000005018/1-732 GVVYPSEDSE TDIVLKGVVQ VEKIKTPEDH IGAVLERAKP EYISKTYKIN ENSTTRP00000008153/1-732 GVVYPSEDSE TDIVLKGVVQ VEKIKTPEDH IGAVLERAKP EYISKTYKID bmy_02124T0/1-744 GVVYPSEDSE TDIVLKGVVQ VEKIKTPEDH IGAVLERAKP EYISKTYKID BACU009686/1-670 GVVYPSEDSE TDIVLKGVVQ VEKIKTPEDH IGAVLERAKP EYISKTYKID 451 500 ENSP00000362153/1-731 SWENAEDFLE KLAFRTGKLL KGGEPDLQTV GKMVLNDWQR GRIPFFVKPP ENSBTAP00000005018/1-732 SWENAEDFLE KLAFRTGKLL KGGEPNLRTV GKMVLNDWQR GRIPFFVKPP ENSTTRP00000008153/1-732 SWENAEDFLE KLAFRTGKLL KGGEPDLRTV GKMVLNDWQR GRIPFFVKPP bmy_02124T0/1-744 SWENAEDFLE KLAFRTGKLL KGGEPDLRTV GKMVLNDWQR GRIPFFVKPP BACU009686/1-670 SWEHAEDFLE KLAFRTGKLL KGGEPDLRTV GKMVLNDWQR GRIPFFVKPP 501 550 ENSP00000362153/1-731 NAEPLVAPQL LPSSSLEVVP EAAQNNPGEE VTETAGEGSE SIIKEETEEN ENSBTAP00000005018/1-732 NAEPPAAPEL PSSSSLEVAA ETTQNNPGEK VTETVGEESE SILEKEKEEP ENSTTRP00000008153/1-732 NAEPPVAPQL PSSSSLEVAT ETAQNSPEEG VTDTVGEESE SITEKEKEEP bmy_02124T0/1-744 NAEPPVAPQL PSSSSLEVAT ETTQNNPAEE VTETVGEESE SIIEKEKEEP BACU009686/1-670 NAEPPVAPQL PSSSSLEVAT ETTQNNPAEE VTETVGEESE SIIEKEKEEP 551 600 ENSP00000362153/1-731 SHCDANTEMQ QILTRVRQNF GKINVVPQFS GDDLVPVEVS DLEEELESFS ENSBTAP00000005018/1-732 RHCGIDSEMQ QILARVRQNF GKINVAPQFS GDDLVPLEMS DIDDELESLS ENSTTRP00000008153/1-732 GHGGADSEMQ RIVARVRQNF GKINVVPQFS GDDLVPLEMS DIDEELESLS bmy_02124T0/1-744 GHGGADSEMQ QILARVRQNF GKINVVPQFS GDDLVPLEMS DIDEELESLS BACU009686/1-670 GHGGADSEMQ QILARVRQNF GKINVLPQFS GDDLVPLEMS DIDEELESLS 601 650 ENSP00000362153/1-731 DEEEEEQEQ- ---QRDDAEE SSSEPEEENV GNDTKAVIKA LDEKIAKYQK ENSBTAP00000005018/1-732 AENEEEEEQ- -EYPGDDEDE SYAESQEEHA GRTTKAVIQA LDEKIAKYQR ENSTTRP00000008153/1-732 AEREEEEEEE QEYQGDEEEE SYAKSQEEHA GSNTKAVIQA LDEKIAKYQR bmy_02124T0/1-744 AEREEEAEEE -EHQGDEEEE SYTEFQEEHA GNNSKAVIQA LDEKIAKYQR BACU009686/1-670 AEREEEEEEE -EHQGDEEEE SYAESQEEHA GNNTKAVIQA LDEKIAKYQR 651 700 ENSP00000362153/1-731 FLDKAKAKKF SAVRISKGLS EKIFAKPEEQ RK-TLEEDVD DRAPSKKGKK ENSBTAP00000005018/1-732 FLNKAKAKKF SAIRISKGLS EMVFAKSEGR KKGKAEEDVD DTAPPKKGKK ENSTTRP00000008153/1-732 FLNKAKAKKF SAVRISKGLS QVVFAKSEEQ RR-TAEEDVE DTAPTRKGKK bmy_02124T0/1-744 FLNKAKAKKF SAVRISKGLS KVVFAKSEEQ RR-TVEEDVE DTAPTKKGKK BACU009686/1-670 FLNKAKAKKF SAVRISKGLS KVVFAKSEEQ RR-TVEEDVE DTAPTKKGKK 701 750 ENSP00000362153/1-731 RKAQREEEQE HSNKAPRALT SKERRRAVRQ QRPKKVGVRY YETHNVKNRN ENSBTAP00000005018/1-732 RKAQREE--E QPDKTRRTLT SKERRREARQ QRSRKVGIRY YETHNVKNRN ENSTTRP00000008153/1-732 RKAQREEEQE QSNKARRTLT SKERRREARQ QRSRKVGVRY YETHNVKNRN bmy_02124T0/1-744 RKAQREE--E ESNKTRRTLT SKERRREARQ QRSRKVGVRY YETHNVKNRN BACU009686/1-670 RKAQREE--E QSNKTRRTLT SKERRREARQ QRSRKVGVRY YETHNVKNRN 751 800 ENSP00000362153/1-731 RNKKKTNDSE GQKHKRKKFR QKQ ENSBTAP00000005018/1-732 RNKKKTTDSE GQKHRHKKAK HKQ ENSTTRP00000008153/1-732 RNKKKTSDSE GQKHRHKKLK HKQ bmy_02124T0/1-744 RNKKKISDSE GQKHRH---- --- BACU009686/1-670 RNKKKISDSE GQKHRH---- ---