KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:30 2014 Check: 00 .. Name: bmy_21896T0/1-299 Len: 391 Check: 9215 Weight: 1.00 Name: ENSP00000360183/1-325 Len: 391 Check: 3985 Weight: 1.00 Name: ENSBTAP00000005055/1-326 Len: 391 Check: 9799 Weight: 1.00 Name: ENSTTRP00000009591/1-361 Len: 391 Check: 2105 Weight: 1.00 Name: BACU019660/1-352 Len: 391 Check: 2933 Weight: 1.00 // 1 50 bmy_21896T0/1-299 MGERGPERSS TRPYCLVLFK GAVVNVYIGP RAEDNFDELH KKPVGVPLEV ENSP00000360183/1-325 -------MAT RR-------- --LTDAFLLL RN----NSIQ NRQLLAEQVS ENSBTAP00000005055/1-326 -------MAT RR-------- --LTDAFLLL RN----NSIQ NRQLLAEQVS ENSTTRP00000009591/1-361 ------DMAT RR-------- --LTDAFLLL RN----NSIQ NRQLLAEQVS BACU019660/1-352 ------DMAT RR-------- --LTDAFLLL RN----NSIQ NRQLLAEQVS 51 100 bmy_21896T0/1-299 DTNYCADKFS QSKSNACSQL ADDRMALVSG ISLDPEAAIG VTKRLPPKWV ENSP00000360183/1-325 SHITSSPLHS RSIAAELDEL ADDRMALVSG ISLDPEAAIG VTKRPPPKWV ENSBTAP00000005055/1-326 SHTTSSPLHS RSIAAELDEL ADDRMALVSG ISLDPEAAIG VTKRSPPKWV ENSTTRP00000009591/1-361 SHTTCSPLHS RSIAATLAGL ADDRMALVSG ISLDPEAAIG VTKRLPPKWV BACU019660/1-352 SHTTCSPLHS RSIAA----L ADDRMALVSG ISLDPEAAIG VTKRLPPKWV 101 150 bmy_21896T0/1-299 DGVDEIQYDV GRIKQKMKEL ASLHDQHLNR PTLDDSSEQE HAIEITTQEV ENSP00000360183/1-325 DGVDEIQYDV GRIKQKMKEL ASLHDKHLNR PTLDDSSEEE HAIEITTQEI ENSBTAP00000005055/1-326 DGVDEIQYDV GRIKQKMKEL ASLHDQHLNR PTLDDSSEQE HAIEITTQEI ENSTTRP00000009591/1-361 DGVDEIQYDV GRIKQKMKEL ASLHDQHLNR PTLDDSLEQE HAIEITTQEI BACU019660/1-352 DGVDEIQYDV GRIKQKMKEL ASLHDQHLNR PTLDDSSEQE HAIEITTQEV 151 200 bmy_21896T0/1-299 TQLFHRCQRA VQALPSRARR ACSEQEERLL RNVVASLAQA LQELSTGFRR ENSP00000360183/1-325 TQLFHRCQRA VQALPSRA-R ACSEQEGRLL GNVVASLAQA LQELSTSFRH ENSBTAP00000005055/1-326 TQLFHRCQRA VQALPSRARR ACSEQEERLL RNVVASLAQA LQELSTSFRH ENSTTRP00000009591/1-361 TQLFHRCQRA VQALPSQARR ACSEQEERLL RNVVGSLAQT LQELSARFRR BACU019660/1-352 TQLFHRCQRA VQALPSRARR ACSEQEERLL RNVVASLAQA LQELSTSFRR 201 250 bmy_21896T0/1-299 AQSGYLKRLK NREERSQHFF DTSVPLMDDG DDNTLYDR-- ---------- ENSP00000360183/1-325 AQSGYLKRMK NREERSQHFF DTSVPLMDDG DDNTLYHRGF TEDQLVLVEQ ENSBTAP00000005055/1-326 AQSSYLRRMK NREERSQHFF ATSVPLMDDG EDNTLYDRGF TDEQLVLVEQ ENSTTRP00000009591/1-361 AQSGYLKRLK NREERSQHFF DTSVPLMDDG DDNTLYDRGF TDDQLALVGQ BACU019660/1-352 AQSGCLKRLK NREERSQHFF DTSVPLMDDG DDNTLYDRGF TDDQVVLVGQ 251 300 bmy_21896T0/1-299 ---------- ---------- ---------- ------GTVL DRIDYNVEQS ENSP00000360183/1-325 NTLMVEERER EIRQIVQSIS DLNEIFRDLG AMIVEQGTVL DRIDYNVEQS ENSBTAP00000005055/1-326 NTLLVEERER EIRQIVQSIS DLNEIFRDLG AMIVEQGTVL DRIDYNVEQS ENSTTRP00000009591/1-361 STLMVDARER EVGRIVQSIC DLNEIFRDLG AMIAEQGTVL DRIDYNVEQS BACU019660/1-352 STLM-----R EIGRIVQSIS DLNEIFRDLG AMIVEQGTVL DRIDYNVEQS 301 350 bmy_21896T0/1-299 CIKTEDGLKQ LHKAEQYQKK NRKMLVILIL FVIIIVLIVV LVGV------ ENSP00000360183/1-325 CIKTEDGLKQ LHKAEQYQKK NRKMLVILIL FVIIIVLIVV LVGV------ ENSBTAP00000005055/1-326 CIKTEDGLKQ LHKAEQYQKK NRKMLVILIL LVIIIVLTVV LVGV------ ENSTTRP00000009591/1-361 CIKTEDGLKQ LHK-----VP SRPVPSHPVS L---RKSYFI HQGRAVPHLP BACU019660/1-352 CIKTEDGLKQ LHKPRGHGVR ASPVPSHPVP LACASPSSSI RAGLNVPHLP 351 400 bmy_21896T0/1-299 ---------- ---------- --KSH----- ---------- - ENSP00000360183/1-325 ---------- ---------- --KSR----- ---------- - ENSBTAP00000005055/1-326 ---------- ---------- --KSR----- ---------- - ENSTTRP00000009591/1-361 GSPPHRPQVP HTPVCSIFAN --KSDRSSCM LCSVPGPEER L BACU019660/1-352 GSPPPRPQVP HTPVCGRFAN RRKSDRSSYM L--------- -