KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:30 2014 Check: 00 .. Name: ENSTTRP00000010414/1-579 Len: 621 Check: 2723 Weight: 1.00 Name: ENSP00000357565/1-578 Len: 621 Check: 9108 Weight: 1.00 Name: ENSBTAP00000005061/1-579 Len: 621 Check: 5936 Weight: 1.00 Name: bmy_06841T0/1-611 Len: 621 Check: 862 Weight: 1.00 Name: BACU014245/1-499 Len: 621 Check: 9120 Weight: 1.00 // 1 50 ENSTTRP00000010414/1-579 ---------- MLSCNICGET VTSEPDMKTH LLIVHMENEV TCPFCKLSGV ENSP00000357565/1-578 ---------- MLSCNICGET VTSEPDMKAH -LIVHMESEI ICPFCKLSGV ENSBTAP00000005061/1-579 ---------- MLSCDICGET VSSEPDMKAH LLIVHMENEV ICPFCKLSGV bmy_06841T0/1-611 ---------- MLSCNICGVT VTSEPDMKAH LLIVHMENEV TCPFCKLSGV BACU014245/1-499 MDPCLVTCCT MLSCNICGIT VTSEPDMKAH -LIVHMENEV TCPFCKLSGV 51 100 ENSTTRP00000010414/1-579 NYDEMCFHIE TAHFEQNELE KNFERINTVQ CGTSNSRKDS TLQCRMEVNS ENSP00000357565/1-578 NYDEMCFHIE TAHFEQNTLE RNFERINTVQ YGTSDNKKDN TLQCGMEVNS ENSBTAP00000005061/1-579 NYDEMCFHIE TAHFEQNELE RNFERINTVQ YGISDNRKDS SLQCRADINS bmy_06841T0/1-611 NYDEMCFHIE TAHFEQNELE KNFERINTIQ YGTSNSRKDS TLQCRMEVNS BACU014245/1-499 NYDEMCFHIE TAHFEQNELE KNFERINTIQ YGTSNSRKDS TLQCRMEVNS 101 150 ENSTTRP00000010414/1-579 SIHSACASNH PKISAQGPPN NGILKHKGFH SENLTESRKF LKSKEKQSDR ENSP00000357565/1-578 SILSGCASNH PKNSAQNLTK DSTLKHEGFY SENLTESRKF LKSREKQSSL ENSBTAP00000005061/1-579 SVHSACASNQ PKISAQSLPK DGTLKHKDFY SENLTESRKF LKSTEKQSDR bmy_06841T0/1-611 SIHSACASNX PKISAQGPPN NGILKHKGFY SENLTESRKF LKSKEKQSDR BACU014245/1-499 SIHSACASNH PKISAQGPPN NGILKHKGFY SENLTESRKF LKSKEKQSDR 151 200 ENSTTRP00000010414/1-579 TKIKGSIYEA MYSPPECPFC GKIEGCSQDM ETHVKTEHAD LLDTPLEDCN ENSP00000357565/1-578 TEIKGSVYET TYSPPECPFC GKIEEHSEDM ETHVKTKHAN LLDIPLEDCD ENSBTAP00000005061/1-579 TKIKESIYET MYSPPECPFC GKIEDNSQDM ETHVKTKHAD LLDTPLEDCN bmy_06841T0/1-611 TKIKGSIYEA MYSPPECPFC GKIEGCSQDM ETHVKTEHAD LLDTPLEDCN BACU014245/1-499 TKIKGSIYEA VYSPPECPFC GKIEGCSQDM ETHVKTEHAD ILDTPLEDCN 201 250 ENSTTRP00000010414/1-579 QPLYDCPMCG LICTNYHILQ EHVDLHLEES NFGQGMDRVQ CSRDLELAQQ ENSP00000357565/1-578 QPLYDCPMCG LICTNYHILQ EHVDLHLEEN SFQQGMDRVQ CSGDLQLAHQ ENSBTAP00000005061/1-579 QLLYDCPMCG LVCTNYHILQ EHVDLHLEES SFGQGVNRVQ CSRDLELAQQ bmy_06841T0/1-611 QPLYDCPICG LICTNYHILQ EHVDLHLEES SFGQGMDRVQ CSRDLELAQQ BACU014245/1-499 QSLYDCPICG LICTNYHILQ EHVDLHLEES SFGQGMDRVQ CSRDLELAQQ 251 300 ENSTTRP00000010414/1-579 LQQEEDRKRR SEESRQEMEE FQNLQRQYGL NNSGGYKQQQ LRNMEIEVNR ENSP00000357565/1-578 LQQEEDRKRR SEESRQEIEE FQKLQRQYGL DNSGGYKQQQ LRNMEIEVNR ENSBTAP00000005061/1-579 LQQEEDRKRR SEESRQEMEE FQKLQRQYGL DNSGGYKQQQ LRNMEIEVNR bmy_06841T0/1-611 LQQEEDRKRR SEESRQEMEE FQKLQRQYGL NNSGGYKQQQ LRNMEIEVNR BACU014245/1-499 LQQEEDRKRR SEESRQEMEE FQKLQRQYGL NNSGGYKQQQ LRNMEIEVNR 301 350 ENSTTRP00000010414/1-579 GRMHPSEFHR RKADMMESLA IGIDDGKTKT SXXXXXXXXX XXXXXXXXXX ENSP00000357565/1-578 GRMPPSEFHR RKADMMESLA LGFDDGKTKT SGIIEALHRY YQNAATDVRR ENSBTAP00000005061/1-579 GRMHPSEFHR RKADMMESLA IGVDDGKTKT SGIMEALYRY YQNAATDVRR bmy_06841T0/1-611 GRMHPSEFHR RKADMMESLA IGIDDEKTKT SGIMEALYRY YQNAATDVRR BACU014245/1-499 GRMHPSEFHR RKADMMESLA IGIDDEKTKT SGIMEALYRY YQNAATDVRR 351 400 ENSTTRP00000010414/1-579 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XCLKGMSVPC ENSP00000357565/1-578 VWLSSVVDHF HSSLGDKGWG CGYRNFQMLL SSLLQNDAYN DCLKGMLIPC ENSBTAP00000005061/1-579 VWLSAGVDHF HSSFGDKGWG CGYRNFQMLL SSLLQNDAYD DSLKGMSVPC bmy_06841T0/1-611 VWLSTVVDHF HSSFGDKGWG CGYRNFQMLL SSLLQNDAYD DCLKGMSVPC BACU014245/1-499 VWLSTVVDHF HSSFGDKGWG CGYRNFQMLL SSLLQNDAY- DCLKGMSVPC 401 450 ENSTTRP00000010414/1-579 IPKIQSMIED AWKEGFDPQG ASQLNNRLQG TKAWIGACEV YTLLTSLRIK ENSP00000357565/1-578 IPKIQSMIED AWKEGFDPQG ASQLNNRLQG TKAWIGACEV YILLTSLRVK ENSBTAP00000005061/1-579 IPKIQSMIED AWKEGFDPQG ASQLNDKLQG TKAWIGACEI YTLLTSLRIK bmy_06841T0/1-611 IPKIQSMIED AWKEGFDPQG ASQLNNRLQG TKAWIGACEV YTLLTSLRIK BACU014245/1-499 IPKIQSMIED AWKEGFDPQG ASQLNNRLQG TKAWIGACEV YTLLTSLRIK 451 500 ENSTTRP00000010414/1-579 CRIIDFHKST GPLGTHPRLF EWILSYYSSE REGSPKVLFT SKPPIYLQHQ ENSP00000357565/1-578 CHIVDFHKST GPLGTHPRLF EWILNYYSSE GEGSPKVVCT SKPPIYLQHQ ENSBTAP00000005061/1-579 CRIVDFHKST GPLGTHPRLF EWILSYYASE REGSPKVVCT SKPPIYLQHQ bmy_06841T0/1-611 CRIVDFHKST GPLGTHPRLF EWILSYYSSE REGSPKVVCT SKPPIYLQYQ BACU014245/1-499 CRIIDFHKST GPLGTHPRLF EWILSYYSSE REGSPKVVCT SKPPIYLQYQ 501 550 ENSTTRP00000010414/1-579 GHSQTVVGIE ERKNRTLCLL VFDPGCPSRE MQKLLKQDME ASSVKQLRKF ENSP00000357565/1-578 GHSRTVIGIE EKKNRTLCLL ILDPGCPSRE MQKLLKQDIE ASSLKQLRKS ENSBTAP00000005061/1-579 GHSRTVVGIE EKKNRTLCLL VFDPGCPSRE MQKLLKQDME VSSLKQLRKF bmy_06841T0/1-611 GHSQTVVGIE ERKNRTLCLL VFDPGCPSRE MQKLLKQDTE ASSVKQLRKF BACU014245/1-499 G--------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000010414/1-579 VGNLKHKQYQ IVAVEGVLSS EEKIARRQA- SQVFTAEKIP ---------- ENSP00000357565/1-578 MGNLKHKQYQ ILAVEGALSL EEKLARRQA- SQVFTAEKIP ---------- ENSBTAP00000005061/1-579 VGNLKHKQYQ IVAVEGVLSS EEKIARRQA- SQVFTAEKIP ---------- bmy_06841T0/1-611 VGNLKHKQYQ IVAVEGVLSS EEKIGSNEKW QHIWPGDKLL KSLQPRRSLE BACU014245/1-499 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000010414/1-579 ---------- ---------- - ENSP00000357565/1-578 ---------- ---------- - ENSBTAP00000005061/1-579 ---------- ---------- - bmy_06841T0/1-611 EVSISVIVEF YFIFQIQILN F BACU014245/1-499 ---------- ---------- -