KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:25:33 2014  Check: 00 ..

 Name: ENSP00000261623/1-195     Len:    214  Check:  2320  Weight:  1.00
 Name: bmy_20975T0/1-209         Len:    214  Check:  9098  Weight:  1.00
 Name: ENSTTRP00000005912/1-192  Len:    214  Check:  4068  Weight:  1.00
 Name: ENSBTAP00000005080/1-191  Len:    214  Check:  2598  Weight:  1.00

//


                          1                                                   50
ENSP00000261623/1-195     MGQIEWAMWA NEQALASGLI LITGGIVATA GRFTQWYFGA YSI------- 
bmy_20975T0/1-209         MGQIEWAMWA NEQALASGLI LITGGIVATA GQFAQWYLGA YSMYPPAAHP 
ENSTTRP00000005912/1-192  MGQIEWAMWA NEQALASGLI LITGGIVATA GQFAQWYLGA YSI------- 
ENSBTAP00000005080/1-191  MGQIEWAMWA NEQALASGLI LITGGIVATA GQFTQWYLGA YSI------- 


                          51                                                 100
ENSP00000261623/1-195     -VAGVFVCLL EYPRGKRKKG STMERWGQKY MTAVVKLFGP FTRNYYVRAV 
bmy_20975T0/1-209         SAAGVLICLL EYPRGKRSKG STMERCGQKY LTRVVKAFGP LTSNYYIRAF 
ENSTTRP00000005912/1-192  -AAGVLICLL EYPRGKRSKG STMERCGQKY LTRAVKVFGP LTSNYYIRAF 
ENSBTAP00000005080/1-191  -AAGVLVCLL EYPRGKRSKG STMERCGQKY LTRVVKLFGP LTRNYYIRAF 


                          101                                                150
ENSP00000261623/1-195     LHLLLSVPAG FLLATILGTA CLAIASGIYL L--AAVRGE- QW-------- 
bmy_20975T0/1-209         LHLGLSVPAG FLLATILGTA CLAIASSIYL LVSSVLRGQP RWRLSAGSSG 
ENSTTRP00000005912/1-192  LHLGLSVPAG FLLATILGTA CLAIASSIYL L--AAIHGE- HW-------- 
ENSBTAP00000005080/1-191  LHLGLAVPAG FLLATILGTA CLAIASGIYL L--AAIRGE- QW-------- 


                          151                                                200
ENSP00000261623/1-195     TPIEPKPRER PQIGGTIKQP PSNPPPRPPA EARKKPSEEE AAVAAGGPPG 
bmy_20975T0/1-209         PPSRPSPR-- PQVGGTIKQP PSNPPPRPPA EARKKPSEEE ---VAGVPVG 
ENSTTRP00000005912/1-192  TPIETKPKER PQVGGTIKQP PSNPPPRPPA EARKKPSEEE ---VAGVPGG 
ENSBTAP00000005080/1-191  SPIEPKPKER PQIGGTIKQP PSNPPPRPPA EARKKPSEE- ---AAGVPTG 


                          201                                                250
ENSP00000261623/1-195     GPQVNPIPVT DEVV 
bmy_20975T0/1-209         GPQENPMPVT DEVV 
ENSTTRP00000005912/1-192  GPQENPMPVT DEVV 
ENSBTAP00000005080/1-191  GPQENPMPVN DEVV