KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:25:34 2014 Check: 00 .. Name: ENSTTRP00000008017/1-390 Len: 466 Check: 6858 Weight: 1.00 Name: BACU018069/1-378 Len: 466 Check: 2395 Weight: 1.00 Name: bmy_05659T0/1-453 Len: 466 Check: 8028 Weight: 1.00 Name: ENSBTAP00000005083/1-340 Len: 466 Check: 6092 Weight: 1.00 Name: ENSP00000377823/1-391 Len: 466 Check: 1104 Weight: 1.00 // 1 50 ENSTTRP00000008017/1-390 MKVLGHKIEL LTGLLLHDGT MAGLQELRFP EEKPLLRGQD ATELENSDTF BACU018069/1-378 ---------- ---------- MAGLQELRFP EEKPLLRGQD AAELENSDTF bmy_05659T0/1-453 MKVLGHKIEL LTGLLLHDVT MAGLQELRFP EEKPLLRGQD AAELENSDTF ENSBTAP00000005083/1-340 ---------- ---------- --------MP EC-------- ---------- ENSP00000377823/1-391 MKVLGHRLEL LTGLLLHDVT MAGLQELRFP EEKPLLRGQD ATELESSDAF 51 100 ENSTTRP00000008017/1-390 LLAVDTDWK- ---------- -----XXXXX XXXXXLHVVI RGSPKGIRPA BACU018069/1-378 LLAVDTDWK- ---------- -----EHDIE TPYGLLHVVI RGSPKGNRPA bmy_05659T0/1-453 LLAVDTDWKS RPVASLSKMP ECWDGEHDIE TPYGLLHVVI RGSPKGNRPA ENSBTAP00000005083/1-340 -------WD- ---------- ----GEHDIE TPYGLLHVVI RGSPKGNRPA ENSP00000377823/1-391 LLAADTDWK- ---------- -----EHDIE TPYGLLHVVI RGSPKGNRPA 101 150 ENSTTRP00000008017/1-390 IL-YHDVGLN HKLCFNTFFN FEDMQEITKH FVVCHVDAPG QQVGASQFPQ BACU018069/1-378 IVTYHDVGLN HKLCFNTFFN FEDMQEITKH FVVCHVDAPG QQVGASQFPQ bmy_05659T0/1-453 ILTYHDVGLN HKLCFNTFFN FEDMQEITKH FVVCHVDAPG QQVGASQFPQ ENSBTAP00000005083/1-340 ILTYHDVGLN HKLCFNTFFN FEDMQEITKH FVVCHVDAPG QQVGASQFPQ ENSP00000377823/1-391 ILTYHDVGLN HKLCFNTFFN FEDMQEITKH FVVCHVDAPG QQVGASQFPQ 151 200 ENSTTRP00000008017/1-390 GYQFPSMEQL AAMLPSVVQH FGFKYVIGIG VGAGAYVLAK FALIFPDLVE BACU018069/1-378 GYQFPSMEQL AAMLPSVVQH FGFKYVIGIG VGAGAYVLAK FALIFPDLVE bmy_05659T0/1-453 GYQFPSMEQL AAMLPSVVQH FGFKYVIGIG VGAGAYVLAK FALIFPDLVE ENSBTAP00000005083/1-340 GYQFPSMEQL AAMLPSVVQH FGFKYVIGIG VGAGAYVLAK FALIFPDLVE ENSP00000377823/1-391 GYQFPSMEQL AAMLPSVVQH FGFKYVIGIG VGAGAYVLAK FALIFPDLVE 201 250 ENSTTRP00000008017/1-390 GLVLINIDPN GKGWIDWAAT KLSSLTSTLP DTVLSHLFRQ ---------- BACU018069/1-378 GLVLINIDPN GKGWIDWAAT K--------- ---------- ---------- bmy_05659T0/1-453 GLVLINIDPN GKGWIDWAAT KLSSLTSTLP DTVLSHLFRQ GPLRPEVPPL ENSBTAP00000005083/1-340 GLVLMNIDPN GKGWIDWAAT KLSGLTSTLP DTVLSHLFSQ ---------- ENSP00000377823/1-391 GLVLVNIDPN GKGWIDWAAT KLSGLTSTLP DTVLSHLFSQ ---------- 251 300 ENSTTRP00000008017/1-390 ---------- ---------- ---XXXXXXX XXXXXXXXXX XXXXXXXXXX BACU018069/1-378 ---------- ---------- ---EELVSNT ELVQSYRQQI GNVVNQANLQ bmy_05659T0/1-453 SQSPSVAPHR SAARALIPRP RAQEELVSNT ELVQSYRQQI GNVVNQANLQ ENSBTAP00000005083/1-340 ---------- ---------- ---EELVSNT ELVQSYRQQI SNVVNQANLQ ENSP00000377823/1-391 ---------- ---------- ---EELVNNT ELVQSYRQQI GNVVNQANLQ 301 350 ENSTTRP00000008017/1-390 XXXXXXXXRR DLDINRPGTV PNAKTLRCPV MLVVGDNAPA EEGVXECNSK BACU018069/1-378 LFWNMYNSRR DLDINRPGTV PNAKTLRCPV MLVVGDNAPA EEGVVECNSK bmy_05659T0/1-453 LFWNMYNSRR DLDINRPGTV PNAKTLRCPV MLVVGDNAPA EEGVVECNSK ENSBTAP00000005083/1-340 LFWNMYNSRR DLDISRPGTV PNAKTLRCPV MLVVGDNAPA EDGVVECNSK ENSP00000377823/1-391 LFWNMYNSRR DLDINRPGTV PNAKTLRCPV MLVVGDNAPA EDGVVECNSK 351 400 ENSTTRP00000008017/1-390 LDPTTTTFLK MADSGGLPQV T--------- ----QPGKLT EAFKYFLQGM BACU018069/1-378 LDPTTTTFLK MADSGGLPQV TQAAKQSMYL SLVLQPGKLT EAFKYFLQGM bmy_05659T0/1-453 LDPTTTTFLK MADSGGLPQV TQAAKQSMYL FLVLQPGKLT EAFKYFLQGM ENSBTAP00000005083/1-340 LDPTTTTFLK ---------- ---------- -----PGKLT EAFKYFLQGM ENSP00000377823/1-391 LDPTTTTFLK MADSGGLPQV T--------- ----QPGKLT EAFKYFLQGM 401 450 ENSTTRP00000008017/1-390 GYM------- ------PSAS MTRLARSRTS SLTSASSVDG SRPQACTHSE BACU018069/1-378 GYIAYLKDRR LSGGAVPSAS MTRLARSRTS SLTSASSVDG SRPQACTHSE bmy_05659T0/1-453 GYM------- ------PSAS MTRLARSRTS SLTSASSVDG SRPQACTHSE ENSBTAP00000005083/1-340 GYIAYLKDRR LSGGAVPSAS MTRLARSRTA SLTSANSVDG SRPQACTHSE ENSP00000377823/1-391 GYM------- ------PSAS MTRLARSRTA SLTSASSVDG SRPQACTHSE 451 500 ENSTTRP00000008017/1-390 SSEGLGQVNH TMEVSC BACU018069/1-378 SSEGLGQVNH TMEVSC bmy_05659T0/1-453 SSEGLGQVNH TMEVSC ENSBTAP00000005083/1-340 SSEGLGQVNH TMEVSC ENSP00000377823/1-391 SSEGLGQVNH TMEVSC